Experiment set4IT043 for Methanococcus maripaludis JJ

Compare to:

Iron excess (2.5x) , H2 media

200 most important genes:

  gene name fitness t score description  
MMJJ_RS02045 -6.0 -3.3 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03055 -5.8 -3.0 hypothetical protein compare
MMJJ_RS00580 -5.8 -2.3 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00570 -5.6 -2.2 ribonuclease P compare
MMJJ_RS03620 -5.3 -5.2 DUF2097 domain-containing protein compare
MMJJ_RS02090 -5.2 -5.1 tyramine--L-glutamate ligase compare
MMJJ_RS07950 -5.1 -3.1 4Fe-4S binding protein compare
MMJJ_RS09375 -5.1 -2.0 hypothetical protein compare
MMJJ_RS02920 -5.1 -2.3 30S ribosomal protein S27ae compare
MMJJ_RS04800 -4.8 -6.6 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03670 -4.8 -4.6 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS05445 -4.8 -2.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS05450 -4.8 -14.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS03895 -4.8 -4.7 hydrogenase expression/formation protein HypE compare
MMJJ_RS04485 -4.7 -10.9 riboflavin synthase compare
MMJJ_RS06625 -4.7 -2.2 pyruvate synthase subunit PorB compare
MMJJ_RS08320 -4.7 -2.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS02275 -4.7 -6.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01600 -4.6 -2.8 radical SAM protein compare
MMJJ_RS03125 -4.6 -3.2 GMC oxidoreductase compare
MMJJ_RS05995 -4.6 -2.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS06510 -4.6 -2.6 LL-diaminopimelate aminotransferase compare
MMJJ_RS08035 -4.6 -8.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS03820 -4.5 -3.1 hydrogenase formation protein HypD compare
MMJJ_RS03615 -4.5 -3.7 cobalt-precorrin-8 methylmutase compare
MMJJ_RS01810 -4.5 -2.3 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04730 -4.4 -2.7 tyrosine decarboxylase MfnA compare
MMJJ_RS00560 -4.4 -4.1 homoisocitrate dehydrogenase compare
MMJJ_RS06880 -4.4 -1.7 EhaG family protein compare
MMJJ_RS03005 -4.4 -3.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS05070 -4.4 -2.2 DNA primase catalytic subunit PriS compare
MMJJ_RS05065 -4.4 -5.1 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS04685 -4.4 -9.7 carbamoyltransferase HypF compare
MMJJ_RS07410 -4.3 -4.2 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS04155 -4.3 -7.2 hypothetical protein compare
MMJJ_RS03580 -4.3 -3.7 TIGR00303 family protein compare
MMJJ_RS06270 -4.3 -6.6 dethiobiotin synthase compare
MMJJ_RS00355 -4.3 -2.6 ribonuclease P protein component 4 compare
MMJJ_RS00450 -4.3 -2.0 DUF126 domain-containing protein compare
MMJJ_RS00215 -4.3 -2.4 CCA tRNA nucleotidyltransferase compare
MMJJ_RS01750 -4.2 -3.3 ferrous iron transport protein A compare
MMJJ_RS00645 -4.2 -11.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS08535 -4.2 -4.4 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS01415 -4.2 -3.2 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS04995 -4.1 -6.9 Tfx family DNA-binding protein compare
MMJJ_RS06240 -4.1 -3.2 dihydropteroate synthase-like protein compare
MMJJ_RS00600 -4.1 -3.7 hydroxymethylbilane synthase compare
MMJJ_RS07000 -4.1 -1.9 TrkH family potassium uptake protein compare
MMJJ_RS06485 -4.1 -2.6 phosphoglycerate kinase compare
MMJJ_RS02200 -4.1 -13.2 chorismate pyruvate-lyase family protein compare
MMJJ_RS05930 -4.1 -2.1 cell division protein SepF compare
MMJJ_RS03840 -4.1 -3.9 DHH family phosphoesterase compare
MMJJ_RS03200 -4.0 -2.0 uroporphyrinogen-III synthase compare
MMJJ_RS03270 -4.0 -2.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS08850 -4.0 -2.2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS09175 -4.0 -1.3 anthranilate synthase component I compare
MMJJ_RS06225 -4.0 -2.0 adenosylmethionine decarboxylase compare
MMJJ_RS05650 -4.0 -3.4 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS08870 -3.9 -1.3 2-isopropylmalate synthase compare
MMJJ_RS07380 -3.9 -11.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS03170 -3.9 -12.4 DUF5612 domain-containing protein compare
MMJJ_RS05575 -3.9 -5.4 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS06600 -3.9 -2.4 DUF555 domain-containing protein compare
MMJJ_RS00275 -3.9 -2.9 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS00370 -3.8 -1.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS07720 -3.8 -2.4 UPF0058 family protein compare
MMJJ_RS05610 -3.7 -5.1 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS08095 -3.7 -5.0 cobyric acid synthase CobQ compare
MMJJ_RS06930 -3.7 -3.1 type II methionyl aminopeptidase compare
MMJJ_RS06040 -3.7 -3.9 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08625 -3.7 -8.1 magnesium/cobalt transporter CorA compare
MMJJ_RS01880 -3.7 -3.4 RlmE family RNA methyltransferase compare
MMJJ_RS07785 -3.7 -3.0 fumarate reductase subunit A compare
MMJJ_RS05950 -3.7 -3.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS06840 -3.6 -3.5 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00205 -3.6 -5.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS08855 -3.6 -5.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS07705 -3.6 -4.1 GTP-binding protein EngB compare
MMJJ_RS04475 -3.6 -4.8 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07430 -3.6 -4.0 ribonuclease VapC compare
MMJJ_RS05330 -3.6 -2.1 DNA polymerase II large subunit compare
MMJJ_RS08155 -3.5 -5.2 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS01935 -3.5 -4.4 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS06220 -3.5 -5.8 polyamine aminopropyltransferase compare
MMJJ_RS05765 -3.5 -1.1 flagellar protein E compare
MMJJ_RS06110 -3.5 -2.0 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS07245 -3.5 -5.8 amidohydrolase family protein compare
MMJJ_RS01200 -3.5 -2.4 PRC-barrel domain-containing protein compare
MMJJ_RS05935 -3.5 -2.9 Era-like GTP-binding protein compare
MMJJ_RS04970 -3.5 -2.2 DUF655 domain-containing protein compare
MMJJ_RS07470 -3.5 -2.2 50S ribosome-binding GTPase compare
MMJJ_RS07360 -3.5 -1.8 TIGR00269 family protein compare
MMJJ_RS05720 -3.4 -2.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS02040 -3.4 -2.4 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS06695 -3.4 -3.4 amidohydrolase compare
MMJJ_RS00270 -3.4 -4.2 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS07980 -3.4 -8.1 biotin synthase BioB compare
MMJJ_RS07275 -3.4 -2.3 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS01755 -3.3 -2.6 ferrous iron transport protein B compare
MMJJ_RS05490 -3.3 -2.9 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS08080 -3.3 -8.1 TIGR00300 family protein compare
MMJJ_RS05810 -3.3 -7.2 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS05620 -3.3 -4.9 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS07190 -3.2 -4.4 RtcB family protein compare
MMJJ_RS07375 -3.2 -10.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS03760 -3.2 -4.6 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06490 -3.2 -2.8 methanogenesis marker 2 protein compare
MMJJ_RS03110 -3.2 -4.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS00125 -3.2 -2.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS04200 -3.2 -3.9 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS07875 -3.2 -1.7 FAD-dependent oxidoreductase compare
MMJJ_RS03785 -3.1 -3.2 hypothetical protein compare
MMJJ_RS03875 -3.1 -4.8 CBS domain-containing protein compare
MMJJ_RS04520 -3.1 -4.8 coenzyme F430 synthase compare
MMJJ_RS04700 -3.1 -6.9 deoxyhypusine synthase compare
MMJJ_RS03865 -3.1 -1.7 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06260 -3.0 -6.7 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS08055 -3.0 -8.0 methanogenesis marker 14 protein compare
MMJJ_RS06725 -3.0 -13.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05260 -3.0 -5.7 ATP-grasp domain-containing protein compare
MMJJ_RS04980 -3.0 -6.1 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04675 -3.0 -8.2 thiamine pyrophosphate-binding protein compare
MMJJ_RS03190 -3.0 -3.0 phosphopyruvate hydratase compare
MMJJ_RS04010 -3.0 -6.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS08250 -2.9 -7.2 hydrogenase maturation peptidase HycI compare
MMJJ_RS06180 -2.9 -3.0 tryptophan--tRNA ligase compare
MMJJ_RS06760 -2.9 -5.1 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS06910 -2.9 -3.6 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS04790 -2.9 -5.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS06030 -2.9 -5.4 4Fe-4S binding protein compare
MMJJ_RS01360 -2.9 -2.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS05280 -2.9 -0.9 hypothetical protein compare
MMJJ_RS06265 -2.9 -12.3 8-amino-7-oxononanoate synthase compare
MMJJ_RS01410 -2.9 -6.3 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS03660 -2.9 -4.1 DUF447 family protein compare
MMJJ_RS06750 -2.8 -2.2 homoaconitase large subunit compare
MMJJ_RS08020 -2.8 -8.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08925 -2.8 -11.5 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS01870 -2.8 -2.4 methanogenesis marker 15 protein compare
MMJJ_RS03150 -2.8 -6.0 2-phospho-L-lactate transferase compare
MMJJ_RS06250 -2.8 -2.5 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08130 -2.8 -0.9 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS04145 -2.8 -8.3 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS05225 -2.8 -1.5 Gar1/Naf1 family protein compare
MMJJ_RS06705 -2.8 -5.8 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS01690 -2.7 -3.6 methanogenesis marker 12 protein compare
MMJJ_RS09095 -2.7 -9.8 MMPL family transporter compare
MMJJ_RS06175 -2.7 -2.4 DUF1743 domain-containing protein compare
MMJJ_RS01355 -2.7 -3.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS06700 -2.7 -4.4 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS01350 -2.7 -7.2 sodium:proton antiporter compare
MMJJ_RS05295 -2.7 -8.4 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS06805 -2.7 -2.8 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS07155 -2.6 -7.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS05360 -2.6 -5.7 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS07725 -2.6 -7.5 DNA primase DnaG compare
MMJJ_RS04670 -2.6 -3.6 DUF2117 domain-containing protein compare
MMJJ_RS01475 -2.6 -2.4 signal recognition particle-docking protein FtsY compare
MMJJ_RS06170 -2.6 -10.5 hypothetical protein compare
MMJJ_RS07350 -2.6 -3.5 4Fe-4S binding protein compare
MMJJ_RS03295 -2.6 -12.2 PHP domain-containing protein compare
MMJJ_RS08795 -2.6 -2.7 phosphoglucosamine mutase compare
MMJJ_RS04650 -2.6 -6.3 nitrogenase iron protein compare
MMJJ_RS03965 -2.6 -1.8 DNA-directed RNA polymerase subunit L compare
MMJJ_RS08340 -2.5 -5.1 archaeoflavoprotein AfpA compare
MMJJ_RS04050 -2.5 -1.7 dihydroneopterin aldolase family protein compare
MMJJ_RS08010 -2.5 -7.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS09100 -2.5 -8.4 COG1361 S-layer family protein compare
MMJJ_RS07160 -2.5 -15.6 M20 family metallo-hydrolase compare
MMJJ_RS06375 -2.5 -3.5 UbiX family flavin prenyltransferase compare
MMJJ_RS06730 -2.5 -6.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS04655 -2.5 -5.4 FAD-dependent oxidoreductase compare
MMJJ_RS06255 -2.4 -6.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS05770 -2.4 -2.1 flagellar protein D compare
MMJJ_RS05780 -2.4 -3.2 flagellin compare
MMJJ_RS01815 -2.4 -3.6 DUF134 domain-containing protein compare
MMJJ_RS05590 -2.4 -2.0 homoserine dehydrogenase compare
MMJJ_RS06390 -2.4 -2.0 NADPH-dependent F420 reductase compare
MMJJ_RS03830 -2.4 -6.7 CBS domain-containing protein compare
MMJJ_RS09135 -2.4 -8.2 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS06155 -2.4 -4.0 phosphatidylglycerophosphatase A compare
MMJJ_RS06875 -2.4 -3.0 hypothetical protein compare
MMJJ_RS04505 -2.4 -7.0 CDC48 family AAA ATPase compare
MMJJ_RS08660 -2.3 -3.4 acetylornithine transaminase compare
MMJJ_RS01345 -2.3 -4.7 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS09190 -2.3 -2.0 tryptophan synthase subunit beta compare
MMJJ_RS06185 -2.3 -3.5 cobalamin biosynthesis protein compare
MMJJ_RS05655 -2.3 -4.8 HisA/HisF family protein compare
MMJJ_RS03225 -2.3 -2.9 4Fe-4S binding protein compare
MMJJ_RS03650 -2.3 -6.4 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS04110 -2.3 -5.0 hypothetical protein compare
MMJJ_RS09035 -2.3 -5.1 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS03230 -2.3 -4.1 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04760 -2.3 -14.9 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS06650 -2.3 -12.1 cell division protein FtsZ compare
MMJJ_RS05645 -2.3 -4.0 4Fe-4S binding protein compare
MMJJ_RS05595 -2.2 -2.2 hypothetical protein compare
MMJJ_RS06000 -2.2 -5.2 cation:proton antiporter subunit C compare
MMJJ_RS01860 -2.2 -9.5 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS04770 -2.2 -2.8 formate-dependent phosphoribosylglycinamide formyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms