Experiment set4IT042 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

amylopectin from maize carbon source

200 most important genes:

  gene name fitness t score description  
BT0892 -5.3 -5.0 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3758 -5.1 -3.5 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1379 -5.1 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3719 -4.9 -4.8 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT3761 -4.8 -4.6 N-succinylglutamate synthase (from data) compare
BT2074 -4.5 -9.1 ketol-acid reductoisomerase (NCBI ptt file) compare
BT2415 -4.4 -11.4 aspartate aminotransferase (NCBI ptt file) compare
BT2836 -4.2 -17.5 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT0202 -4.2 -7.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3733 -4.2 -10.7 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3549 -4.1 -4.0 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT0529 -4.1 -4.0 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT1377 -4.0 -4.8 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3717 -4.0 -6.1 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1859 -4.0 -6.0 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1153 -3.9 -8.3 phosphoserine aminotransferase (NCBI ptt file) compare
BT1222 -3.9 -2.7 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT3760 -3.9 -5.9 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1860 -3.9 -6.4 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3936 -3.8 -2.6 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT3933 -3.8 -7.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT0201 -3.8 -5.2 histidinol dehydrogenase (NCBI ptt file) compare
BT1861 -3.8 -7.7 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT1374 -3.8 -7.2 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1843 -3.8 -10.0 adenylosuccinate synthetase (NCBI ptt file) compare
BT1857 -3.8 -8.3 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT0528 -3.7 -5.1 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT3759 -3.7 -10.4 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT0203 -3.7 -5.0 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT2080 -3.7 -5.0 L-cysteine desulfidase cdsB (from data) compare
BT2403 -3.7 -11.6 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT2837 -3.6 -14.3 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT2401 -3.6 -8.3 threonine synthase (NCBI ptt file) compare
BT0200 -3.5 -5.4 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT1152 -3.5 -8.1 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT4211 -3.5 -5.3 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3395 -3.5 -8.1 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3757 -3.4 -7.2 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3253 -3.4 -4.6 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0532 -3.4 -7.7 anthranilate synthase component I (NCBI ptt file) compare
BT3845 -3.4 -6.7 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT0527 -3.3 -5.4 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3718 -3.2 -10.7 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT0891 -3.1 -4.0 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT1858 -3.1 -10.8 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT2003 -3.1 -3.5 putative membrane peptidase (NCBI ptt file) compare
BT0530 -3.1 -6.4 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT2402 -3.0 -12.3 homoserine phosphotransferase HomK (from data) compare
BT3701 SusD -2.9 -12.4 SusD, outer membrane protein (NCBI ptt file) compare
BT2077 -2.9 -10.5 acetolactate synthase large subunit (NCBI ptt file) compare
BT0533 -2.9 -6.1 tryptophan synthase beta chain (NCBI ptt file) compare
BT2129 -2.9 -6.6 aspartate--ammonia ligase (NCBI ptt file) compare
BT2078 -2.9 -9.9 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1378 -2.9 -4.2 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT2076 -2.8 -8.9 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT3698 SusG -2.8 -14.7 Alpha-amylase susG (EC 3.2.1.1) (from data) compare
BT3705 SusR -2.8 -12.8 regulatory protein SusR (NCBI ptt file) compare
BT3702 SusC -2.6 -14.7 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT0967 -2.5 -2.8 hypothetical protein (NCBI ptt file) compare
BT1524 -2.4 -2.3 hypothetical protein (NCBI ptt file) compare
BT3700 SusE -2.4 -8.1 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT3935 -2.4 -6.7 aminotransferase (NCBI ptt file) compare
BT1381 -2.4 -7.1 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT1733 -2.3 -11.7 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT3164 -2.3 -6.6 quinolinate synthetase A (NCBI ptt file) compare
BT3320 -2.3 -7.6 dihydrodipicolinate reductase (NCBI ptt file) compare
BT_2008 -2.3 -2.2 hypothetical protein (RefSeq) compare
BT0738 -2.2 -4.2 serine hydroxymethyltransferase (NCBI ptt file) compare
BT1262 -2.2 -2.0 putative transcriptional regulator (NCBI ptt file) compare
BT1979 -2.2 -3.5 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT3387 -2.2 -2.1 putative polysaccharide deacetylase (NCBI ptt file) compare
BT3866 -2.1 -12.8 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT4191 -2.1 -11.1 hypothetical protein (NCBI ptt file) compare
BT1270 -2.1 -6.2 putative Na+/H+ antiporter (NCBI ptt file) compare
BT3918 -2.0 -2.7 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT0740 -2.0 -2.5 flavoredoxin (NCBI ptt file) compare
BT3184 -2.0 -10.8 L-aspartate oxidase (NCBI ptt file) compare
BT2045 -2.0 -3.4 hypothetical protein (NCBI ptt file) compare
BT1607 -2.0 -4.5 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3193 -1.9 -8.9 putative coenzyme A transferase (NCBI ptt file) compare
BT3699 SusF -1.9 -8.2 SusF: Outer membrane amylopectin-binding protein (from data) conserved
BT3481 -1.9 -1.6 putative glutaminase A (NCBI ptt file) compare
BT1336 -1.9 -4.2 putative translation initiation inhibitor (NCBI ptt file) compare
p5482_02 -1.9 -4.1 hypothetical protein (NCBI) compare
BT1220 -1.9 -3.2 6-phosphogluconolactonase (NCBI ptt file) compare
BT3770 -1.9 -3.2 transcriptional regulator (NCBI ptt file) compare
BT4733 -1.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1853 -1.9 -3.2 putative sulfatase (NCBI ptt file) compare
BT0352 -1.9 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT2046 -1.8 -1.7 putative cardiolipin synthetase (NCBI ptt file) compare
BT0900 -1.8 -3.3 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT3762 -1.8 -3.6 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT1375 -1.8 -6.6 aspartokinase (NCBI ptt file) compare
BT0739 -1.8 -2.6 hypothetical protein (NCBI ptt file) compare
BT1353 -1.8 -4.2 glycosyltransferase (NCBI ptt file) compare
BT1844 -1.8 -3.5 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1058 -1.8 -9.8 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1747 -1.8 -7.6 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT3394 -1.8 -6.6 putative arginine decarboxylase (NCBI ptt file) compare
BT2153 -1.8 -2.3 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT1345 -1.8 -5.7 glycosyltransferase (NCBI ptt file) compare
BT1608 -1.7 -6.3 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1232 -1.7 -2.0 hypothetical protein (NCBI ptt file) compare
BT3355 -1.7 -1.2 putative auxin-regulated protein (NCBI ptt file) compare
BT1341 -1.7 -7.6 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT2946 -1.7 -2.2 putative glycosyltransferase (NCBI ptt file) compare
BT3882 -1.7 -2.2 putative DNA binding protein (NCBI ptt file) compare
BT1444 -1.7 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT1347 -1.6 -4.8 conserved hypothetical protein (NCBI ptt file) compare
BT0652 -1.6 -2.3 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT1351 -1.6 -5.5 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT3703 SusB -1.6 -8.7 alpha-glucosidase SusB (NCBI ptt file) compare
BT1346 -1.6 -6.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT2853 -1.6 -2.7 hypothetical protein (NCBI ptt file) compare
BT1356 -1.6 -4.1 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT3981 -1.6 -2.8 hypothetical protein (NCBI ptt file) compare
BT1970 -1.6 -7.2 glutamate dehydrogenase (NCBI ptt file) compare
BT1342 -1.6 -6.4 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT3361 -1.5 -6.8 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT1526 -1.5 -3.9 myo-inositol-1-phosphate synthase (NCBI ptt file) compare
BT2167 -1.5 -6.6 elongation factor G (NCBI ptt file) compare
BT2452 -1.5 -6.0 hypothetical protein (NCBI ptt file) compare
BT1894 -1.5 -5.3 TPR-repeat-containing proteins (NCBI ptt file) compare
BT1380 -1.4 -2.0 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT2034 -1.4 -2.9 two-component system response regulator (NCBI ptt file) compare
BT1221 -1.4 -3.8 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT4339 -1.4 -4.7 glutamine synthetase (NCBI ptt file) compare
BT1575 -1.4 -2.9 putative dehydrogenase (NCBI ptt file) compare
BT0033 -1.4 -2.6 hypothetical protein (NCBI ptt file) compare
BT1350 -1.4 -6.2 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT0927 -1.4 -2.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT3978 -1.4 -4.6 putative cardiolipin synthetase (NCBI ptt file) compare
BT1343 -1.4 -4.9 putative capsule biosynthesis protein (NCBI ptt file) compare
BT1340 -1.3 -5.8 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT1476 -1.3 -3.4 aspartate aminotransferase (NCBI ptt file) compare
BT0649 -1.3 -2.3 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT0896 -1.3 -2.3 putative patatin-like phospholipase (NCBI ptt file) compare
BT1352 -1.2 -4.7 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT2059 -1.2 -2.1 TonB (NCBI ptt file) compare
BT4310 -1.2 -6.6 NADPH-dependent glutamate synthase small chain (NCBI ptt file) compare
BT0249 -1.2 -2.8 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT4644 -1.2 -2.6 putative anti-sigma factor (NCBI ptt file) compare
BT4551 -1.2 -2.3 putative GTPase, ThdF family (NCBI ptt file) compare
BT4702 -1.2 -1.9 dihydroxynapthoic acid synthetase (NCBI ptt file) compare
BT0098 -1.2 -1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0088 -1.2 -2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1868 -1.2 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1540 -1.2 -3.4 transcriptional regulator (NCBI ptt file) compare
BT1446 -1.2 -4.4 dethiobiotin synthetase (NCBI ptt file) compare
BT4061 -1.2 -2.2 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT0700 -1.1 -4.9 GTP pyrophosphokinase (NCBI ptt file) compare
BT1358 -1.1 -2.8 putative transcriptional regulator (NCBI ptt file) compare
BT2605 -1.1 -3.0 hypothetical protein (NCBI ptt file) compare
BT0453 -1.1 -2.1 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT0936 -1.1 -2.3 hypothetical protein (NCBI ptt file) compare
BT3911 -1.1 -2.6 malate dehydrogenase (NCBI ptt file) compare
BT1561 -1.1 -2.1 hypothetical protein (NCBI ptt file) compare
BT0729 -1.1 -3.2 transcriptional regulator (NCBI ptt file) compare
BT4570 -1.1 -1.8 hypothetical protein (NCBI ptt file) compare
BT4234 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT0913 -1.1 -4.0 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT0302 -1.0 -2.6 hypothetical protein (NCBI ptt file) compare
BT1947 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT3992 -1.0 -3.5 putative anti-sigma factor (NCBI ptt file) compare
BT1355 -1.0 -3.6 hypothetical protein (NCBI ptt file) compare
BT1344 -1.0 -3.8 putative glycosyltransferase (NCBI ptt file) compare
BT0395 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT1126 -1.0 -2.3 mobilization protein BmgA (NCBI ptt file) compare
BT0876 -1.0 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1741 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT3392 -1.0 -2.6 nitroreductase (NCBI ptt file) compare
BT1354 -1.0 -4.8 putative flippase (NCBI ptt file) compare
BT4017 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT4593 -1.0 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT1419 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT2741 -1.0 -2.3 sigma-54 modulation protein (NCBI ptt file) compare
BT1390 -0.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0702 -0.9 -1.5 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT2841 -0.9 -2.2 pyruvate kinase (NCBI ptt file) compare
BT3883 -0.9 -1.7 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (NCBI ptt file) compare
BT0173 -0.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0639 -0.9 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT1443 -0.9 -2.9 8-amino-7-oxononanoate synthase (NCBI ptt file) compare
BT3369 -0.9 -2.4 putative glycosyltransferase (NCBI ptt file) compare
BT1723 -0.9 -3.2 polysialic acid transport protein kpsD precursor (NCBI ptt file) compare
BT3077 -0.9 -1.3 ribonuclease R (NCBI ptt file) compare
BT2237 -0.9 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3142 -0.9 -2.1 mobilization protein BmgB (NCBI ptt file) compare
BT3268 -0.9 -2.1 glucose-inhibited division protein A (NCBI ptt file) compare
BT1767 -0.9 -2.8 hypothetical protein (NCBI ptt file) compare
BT1957 -0.9 -4.5 hypothetical protein (NCBI ptt file) compare
BT0231 -0.9 -1.3 excisionase (NCBI ptt file) compare
BT1955 -0.9 -5.4 putative cell wall biogenesis protein (NCBI ptt file) compare
BT3194 -0.9 -2.2 hypothetical protein (NCBI ptt file) compare
BT4029 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT1095 -0.9 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1689 -0.9 -4.3 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT0758 -0.9 -1.9 acetyltransferase (NCBI ptt file) compare
BT4138 -0.8 -3.3 putative aminotransferase (NCBI ptt file) compare
BT3915 -0.8 -1.5 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source amylopectin from maize in Bacteroides thetaiotaomicron VPI-5482

For carbon source amylopectin from maize across organisms