Experiment set4IT042 for Burkholderia phytofirmans PsJN

Compare to:

Min media with glucose

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS05235 +1.3 1.8 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase compare
BPHYT_RS25800 +1.2 2.3 sugar ABC transporter permease compare
BPHYT_RS02660 +1.2 1.8 membrane protein compare
BPHYT_RS02725 +1.2 3.6 GntR family transcriptional regulator compare
BPHYT_RS33765 +1.1 1.7 membrane protein compare
BPHYT_RS35750 +1.1 1.6 hypothetical protein compare
BPHYT_RS12590 +1.1 1.7 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS30490 +1.1 1.1 2-haloalkanoic acid dehalogenase compare
BPHYT_RS28480 +1.1 3.0 hydroxyglutarate oxidase compare
BPHYT_RS23250 +1.0 2.3 hypothetical protein compare
BPHYT_RS35770 +1.0 1.7 glyoxalase compare
BPHYT_RS10135 +1.0 1.3 hypothetical protein compare
BPHYT_RS07595 +1.0 1.7 membrane protein compare
BPHYT_RS15800 +1.0 4.4 GntR family transcriptional regulator compare
BPHYT_RS23270 +1.0 1.8 enoyl-CoA hydratase compare
BPHYT_RS11400 +1.0 1.6 hypothetical protein compare
BPHYT_RS13170 +0.9 2.6 ATPase compare
BPHYT_RS20715 +0.9 2.0 peptidase compare
BPHYT_RS26820 +0.9 1.8 LysR family transcriptional regulator compare
BPHYT_RS11810 +0.9 0.9 LysR family transcriptional regulator compare
BPHYT_RS26015 +0.9 1.9 rod shape-determining protein MreB compare
BPHYT_RS23445 +0.9 0.9 hexuronate transporter compare
BPHYT_RS24630 +0.9 2.0 (2Fe-2S)-binding protein compare
BPHYT_RS32470 +0.9 1.8 membrane protein compare
BPHYT_RS29695 +0.9 1.7 hypothetical protein compare
BPHYT_RS36250 +0.8 2.0 hypothetical protein compare
BPHYT_RS23030 +0.8 1.3 gluconate 2-dehydrogenase compare
BPHYT_RS33515 +0.8 4.7 porin compare
BPHYT_RS18890 +0.8 3.3 flagellar basal body rod protein FlgC compare
BPHYT_RS08665 +0.8 1.0 hypothetical protein compare
BPHYT_RS29865 +0.8 1.7 sugar transferase compare
BPHYT_RS27295 +0.8 1.2 hypothetical protein compare
BPHYT_RS01795 +0.8 4.8 histidine kinase compare
BPHYT_RS27270 +0.8 1.9 photosystem reaction center subunit H compare
BPHYT_RS20000 +0.8 2.3 serine/threonine protein kinase compare
BPHYT_RS01790 +0.8 6.8 LuxR family transcriptional regulator compare
BPHYT_RS25845 +0.8 1.1 RND transporter MFP subunit compare
BPHYT_RS12520 +0.8 1.9 nicotinate phosphoribosyltransferase compare
BPHYT_RS28830 +0.8 0.9 LysR family transcriptional regulator compare
BPHYT_RS14255 +0.8 6.5 ABC transporter compare
BPHYT_RS14250 +0.8 4.9 glycosyl transferase compare
BPHYT_RS09385 +0.8 0.8 FAD-dependent oxidoreductase compare
BPHYT_RS29710 +0.8 2.2 FAD-binding molybdopterin dehydrogenase compare
BPHYT_RS16020 +0.8 2.4 AsnC family transcriptional regulator compare
BPHYT_RS33135 +0.7 1.4 LysR family transcriptional regulator compare
BPHYT_RS29500 +0.7 0.9 hypothetical protein compare
BPHYT_RS18835 +0.7 1.1 flagellar biosynthesis protein FliR compare
BPHYT_RS27720 +0.7 1.2 hypothetical protein compare
BPHYT_RS21330 +0.7 1.6 hypothetical protein compare
BPHYT_RS18860 +0.7 3.1 flagellar P-ring protein FlgI compare
BPHYT_RS21495 +0.7 0.8 ABC transporter compare
BPHYT_RS10540 +0.7 1.2 secretion protein compare
BPHYT_RS08190 +0.7 1.4 type II secretion system protein compare
BPHYT_RS23830 +0.7 1.4 acetyl-CoA hydrolase compare
BPHYT_RS29720 +0.7 1.0 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS28535 +0.7 0.9 response regulator receiver compare
BPHYT_RS01985 +0.7 1.3 hypothetical protein compare
BPHYT_RS35235 +0.7 1.7 amino acid transporter compare
BPHYT_RS25335 +0.7 0.7 hypothetical protein compare
BPHYT_RS28595 +0.7 1.2 glyoxalase compare
BPHYT_RS27345 +0.7 1.5 aldehyde dehydrogenase compare
BPHYT_RS21075 +0.7 1.3 (2Fe-2S)-binding protein compare
BPHYT_RS18870 +0.7 3.3 flagellar basal body rod protein FlgG compare
BPHYT_RS18885 +0.7 3.8 flagellar basal body rod modification protein FlgD compare
BPHYT_RS18875 +0.7 2.8 flagellar basal body rod protein FlgF compare
BPHYT_RS28885 +0.7 1.2 betaine-aldehyde dehydrogenase compare
BPHYT_RS18825 +0.7 3.0 flagellar biosynthesis protein FliP compare
BPHYT_RS06105 +0.6 1.2 hypothetical protein compare
BPHYT_RS30415 +0.6 1.4 AraC family transcriptional regulator compare
BPHYT_RS01095 +0.6 0.9 hypothetical protein compare
BPHYT_RS20725 +0.6 0.9 histidine kinase compare
BPHYT_RS06020 +0.6 2.0 hypothetical protein compare
BPHYT_RS16960 +0.6 2.7 hypothetical protein compare
BPHYT_RS18895 +0.6 1.8 flagellar basal body rod protein FlgB compare
BPHYT_RS32415 +0.6 2.3 translation elongation factor compare
BPHYT_RS03015 +0.6 0.9 aldolase compare
BPHYT_RS21715 +0.6 2.0 taurine ABC transporter permease compare
BPHYT_RS11975 +0.6 1.5 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS24135 +0.6 1.8 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS18925 +0.6 4.4 RNA polymerase sigma70 compare
BPHYT_RS05095 +0.6 2.0 hydroxymethylpyrimidine transporter compare
BPHYT_RS31255 +0.6 1.1 cytochrome B561 compare
BPHYT_RS22355 +0.6 1.6 HAD family hydrolase compare
BPHYT_RS29105 +0.6 0.9 class V aminotransferase compare
BPHYT_RS15260 +0.6 1.4 chorismate mutase compare
BPHYT_RS33360 +0.6 1.2 formyl-CoA transferase compare
BPHYT_RS29810 +0.6 1.0 hexapeptide transferase compare
BPHYT_RS28370 +0.6 0.9 peroxidase compare
BPHYT_RS18810 +0.6 4.2 flagellar motor switch protein FliM compare
BPHYT_RS27370 +0.6 1.0 CoA transferase compare
BPHYT_RS26620 +0.6 1.7 MFS transporter compare
BPHYT_RS19025 +0.6 3.5 transcriptional regulator compare
BPHYT_RS28360 +0.6 1.0 carboxymuconolactone decarboxylase compare
BPHYT_RS34700 +0.6 1.3 arsenate reductase compare
BPHYT_RS36415 +0.6 1.3 hypothetical protein compare
BPHYT_RS23070 +0.6 2.3 hypothetical protein compare
BPHYT_RS25030 +0.6 1.8 gluconate 2-dehydrogenase compare
BPHYT_RS16290 +0.6 0.8 hypothetical protein compare
BPHYT_RS18900 +0.6 5.1 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS33045 +0.6 1.1 response regulator receiver protein compare
BPHYT_RS09565 +0.6 1.2 acetyl-CoA acetyltransferase compare
BPHYT_RS00690 +0.6 0.9 transcriptional regulator compare
BPHYT_RS18600 +0.6 1.2 glutathione S-transferase compare
BPHYT_RS13395 +0.6 1.3 endoribonuclease L-PSP compare
BPHYT_RS09815 +0.6 1.3 malate synthase compare
BPHYT_RS26925 +0.6 1.0 NIPSNAP family containing protein compare
BPHYT_RS28170 +0.6 1.8 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS06915 +0.6 1.4 hypothetical protein compare
BPHYT_RS09010 +0.6 2.6 4-carboxymuconolactone decarboxylase compare
BPHYT_RS18775 +0.6 4.3 flagellar M-ring protein FliF compare
BPHYT_RS03090 +0.6 1.3 hypothetical protein compare
BPHYT_RS06510 +0.6 1.6 DeoR faimly transcriptional regulator compare
BPHYT_RS24955 +0.6 1.3 cytochrome C peroxidase compare
BPHYT_RS32360 +0.6 1.2 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS31685 +0.6 1.2 D-isomer specific 2-hydroxyacid dehydrogenase compare
BPHYT_RS29100 +0.6 1.1 ketosteroid isomerase compare
BPHYT_RS26530 +0.6 1.2 amino acid dehydrogenase compare
BPHYT_RS36600 +0.6 1.5 lytic transglycosylase compare
BPHYT_RS32850 +0.6 1.8 transcriptional regulator compare
BPHYT_RS18880 +0.6 4.5 flagellar hook protein FlgE compare
BPHYT_RS00585 +0.6 1.6 hypothetical protein compare
BPHYT_RS11020 +0.6 1.9 transporter compare
BPHYT_RS28055 +0.6 1.4 membrane protein compare
BPHYT_RS33965 +0.6 1.1 methylcitrate synthase compare
BPHYT_RS30485 +0.6 0.7 ABC transporter ATP-binding protein compare
BPHYT_RS28100 +0.6 1.9 hypothetical protein compare
BPHYT_RS29805 +0.6 2.3 lysine transporter LysE compare
BPHYT_RS18805 +0.6 3.7 flagellar basal body protein FliL compare
BPHYT_RS09620 +0.6 1.4 aminodeoxychorismate lyase compare
BPHYT_RS18945 +0.6 4.4 flagellar biosynthesis protein FlhB compare
BPHYT_RS23695 +0.6 2.8 peptidase S53 compare
BPHYT_RS11705 +0.6 1.0 hypothetical protein compare
BPHYT_RS08405 +0.6 0.8 hypothetical protein compare
BPHYT_RS05515 +0.5 1.1 hypothetical protein compare
BPHYT_RS30930 +0.5 1.8 PAS/PAC sensor signal transduction histidine kinase compare
BPHYT_RS09355 +0.5 1.1 LysR family transcriptional regulator compare
BPHYT_RS18855 +0.5 2.2 flagellar rod assembly protein FlgJ compare
BPHYT_RS35230 +0.5 1.3 type 11 methyltransferase compare
BPHYT_RS18800 +0.5 3.3 flagellar hook-length control protein compare
BPHYT_RS00295 +0.5 1.0 hypothetical protein compare
BPHYT_RS21725 +0.5 0.8 taurine ABC transporter substrate-binding protein compare
BPHYT_RS18935 +0.5 3.5 flagellar biosynthesis regulator FlhF compare
BPHYT_RS34445 +0.5 1.5 GntR family transcriptional regulator compare
BPHYT_RS26330 +0.5 1.6 hypothetical protein compare
BPHYT_RS29155 +0.5 2.1 hypothetical protein compare
BPHYT_RS02860 +0.5 0.7 membrane protein compare
BPHYT_RS11915 +0.5 1.2 hypothetical protein compare
BPHYT_RS12230 +0.5 1.7 hypothetical protein compare
BPHYT_RS05300 +0.5 2.1 polyketide cyclase compare
BPHYT_RS22045 +0.5 1.9 peptide ABC transporter permease compare
BPHYT_RS32150 +0.5 0.8 hypothetical protein compare
BPHYT_RS36000 +0.5 1.2 hypothetical protein compare
BPHYT_RS24505 +0.5 1.7 glyoxalase compare
BPHYT_RS09780 +0.5 1.5 polysaccharide biosynthesis protein compare
BPHYT_RS25820 +0.5 1.2 sugar ABC transporter compare
BPHYT_RS09585 +0.5 0.8 hypothetical protein compare
BPHYT_RS25280 +0.5 2.0 diguanylate cyclase compare
BPHYT_RS21990 +0.5 1.4 FAD-dependent oxidoreductase compare
BPHYT_RS35290 +0.5 1.8 hypothetical protein compare
BPHYT_RS02740 +0.5 2.2 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) compare
BPHYT_RS18830 +0.5 3.5 flagellar biosynthesis protein FliQ compare
BPHYT_RS22485 +0.5 1.5 NADP-dependent aryl-alcohol dehydrogenase compare
BPHYT_RS33165 +0.5 1.9 AraC family transcriptional regulator compare
BPHYT_RS20905 +0.5 0.7 hypothetical protein compare
BPHYT_RS29605 +0.5 0.8 hypothetical protein compare
BPHYT_RS05900 +0.5 1.3 hypothetical protein compare
BPHYT_RS16195 +0.5 1.2 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS10780 +0.5 2.1 hypothetical protein compare
BPHYT_RS10630 +0.5 1.8 oxidoreductase compare
BPHYT_RS30605 +0.5 1.0 MlrC domain-containing protein compare
BPHYT_RS03080 +0.5 1.6 aquaporin Z compare
BPHYT_RS11995 +0.5 1.5 flagellar hook protein FlgE compare
BPHYT_RS14125 +0.5 1.5 transcriptional regulator compare
BPHYT_RS20160 +0.5 2.3 hypothetical protein compare
BPHYT_RS32750 +0.5 0.8 lipoprotein compare
BPHYT_RS36150 +0.5 1.1 hypothetical protein compare
BPHYT_RS04890 +0.5 0.9 cobalamin biosynthesis protein CobD compare
BPHYT_RS10930 +0.5 1.5 GCN5 family N-acetyltransferase compare
BPHYT_RS25330 +0.5 1.7 hypothetical protein compare
BPHYT_RS23600 +0.5 1.0 hypothetical protein compare
BPHYT_RS01435 +0.5 4.4 LysR family transcriptional regulator compare
BPHYT_RS23605 +0.5 1.3 hypothetical protein compare
BPHYT_RS00140 +0.5 1.9 MerR family transcriptional regulator compare
BPHYT_RS24925 +0.5 0.7 cytochrome O ubiquinol oxidase compare
BPHYT_RS34295 +0.5 0.6 fimbrial protein compare
BPHYT_RS22925 +0.5 1.7 pilus assembly protein TadB compare
BPHYT_RS30795 +0.5 0.8 short-chain dehydrogenase compare
BPHYT_RS23435 +0.5 1.7 MFS transporter compare
BPHYT_RS24860 +0.5 2.1 pilus assembly protein PilZ compare
BPHYT_RS25240 +0.5 1.8 choline-sulfatase compare
BPHYT_RS29330 +0.5 1.7 acetyltransferase compare
BPHYT_RS16515 +0.5 1.5 2-hydroxyacid dehydrogenase compare
BPHYT_RS21350 +0.5 1.7 ADP-glucose pyrophosphorylase compare
BPHYT_RS18790 +0.5 3.0 ATP synthase compare
BPHYT_RS21720 +0.5 2.2 nitrate ABC transporter ATP-binding protein compare
BPHYT_RS13455 +0.5 2.2 methyl-accepting chemotaxis protein compare
BPHYT_RS23065 +0.5 1.4 MFS transporter compare
BPHYT_RS04335 +0.5 1.4 membrane protein compare
BPHYT_RS25160 +0.5 0.8 NAD/NADP-dependent betaine aldehyde dehydrogenase compare
BPHYT_RS18865 +0.5 1.3 flagellar L-ring protein FlgH compare


Specific Phenotypes

For 1 genes in this experiment