Experiment set4IT038 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS04145 +2.7 4.1 hypothetical protein compare
MMP_RS00395 +2.3 3.4 MGMT family protein compare
MMP_RS06585 +2.1 3.1 DMT family protein compare
MMP_RS06485 +1.8 1.6 zinc ribbon domain-containing protein compare
MMP_RS02595 +1.7 1.9 putative zinc-binding protein compare
MMP_RS03895 +1.6 1.9 hypothetical protein compare
MMP_RS00155 +1.6 2.7 heavy metal-binding domain-containing protein compare
MMP_RS01055 +1.5 3.3 hypothetical protein compare
MMP_RS09035 +1.5 2.8 hypothetical protein compare
MMP_RS00945 +1.4 1.3 PadR family transcriptional regulator compare
MMP_RS08380 +1.4 3.2 phosphatase PAP2 family protein compare
MMP_RS01620 +1.4 2.2 hypothetical protein compare
MMP_RS00705 +1.4 1.8 hypothetical protein compare
MMP_RS06440 +1.4 3.4 CBS domain-containing protein compare
MMP_RS08310 +1.3 1.9 TMEM165/GDT1 family protein compare
MMP_RS09025 +1.3 1.1 hypothetical protein compare
MMP_RS08725 +1.3 1.0 Ni/Fe hydrogenase subunit alpha compare
MMP_RS00700 +1.3 3.0 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01540 +1.3 0.9 DUF504 domain-containing protein compare
MMP_RS05365 +1.3 2.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS07815 +1.3 1.2 DUF2120 domain-containing protein compare
MMP_RS01645 +1.3 3.5 SWIM zinc finger family protein compare
MMP_RS02370 +1.2 2.2 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS02410 +1.2 2.3 ABC transporter substrate-binding protein compare
MMP_RS01150 +1.2 3.3 aldo/keto reductase compare
MMP_RS01455 +1.2 3.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS08850 +1.2 5.8 hypothetical protein compare
MMP_RS01240 +1.2 0.9 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS03965 +1.1 2.1 hypothetical protein compare
MMP_RS08260 +1.1 3.4 DUF99 family protein compare
MMP_RS07770 +1.1 2.6 alanine racemase compare
MMP_RS08455 +1.1 2.5 multiprotein bridging factor aMBF1 compare
MMP_RS01525 +1.1 1.4 nucleoside-diphosphate kinase compare
MMP_RS05315 +1.0 1.5 hypothetical protein compare
MMP_RS05720 +1.0 1.1 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS05835 +1.0 0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04090 +1.0 0.8 hypothetical protein compare
MMP_RS00665 +1.0 2.4 hypothetical protein compare
MMP_RS05660 +1.0 2.4 phosphate ABC transporter substrate-binding protein compare
MMP_RS01685 +1.0 1.5 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00960 +1.0 2.4 iron export ABC transporter permease subunit FetB compare
MMP_RS00080 +1.0 3.0 RecB-family nuclease compare
MMP_RS03065 +1.0 0.9 AzlC family ABC transporter permease compare
MMP_RS06710 +1.0 2.2 selenium-binding protein compare
MMP_RS00990 +1.0 2.2 hypothetical protein compare
MMP_RS09060 +0.9 3.9 hypothetical protein compare
MMP_RS01570 +0.9 1.0 hypothetical protein compare
MMP_RS01630 +0.9 3.9 N-glycosylase/DNA lyase compare
MMP_RS08130 +0.9 4.0 IGHMBP2 family helicase compare
MMP_RS08845 +0.9 2.0 archaellum operon transcriptional activator EarA family protein compare
MMP_RS04225 +0.9 1.9 hypothetical protein compare
MMP_RS06965 +0.9 2.7 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS08640 +0.9 4.0 TIM barrel protein compare
MMP_RS01605 +0.9 1.6 hypothetical protein compare
MMP_RS08325 +0.9 4.2 hypothetical protein compare
MMP_RS06545 +0.9 1.3 ferredoxin family protein compare
MMP_RS05665 +0.9 2.2 phosphate ABC transporter permease subunit PstC compare
MMP_RS04035 +0.9 1.2 hypothetical protein compare
MMP_RS01130 +0.9 2.2 flavoprotein compare
MMP_RS06095 +0.8 2.0 ABC transporter ATP-binding protein compare
MMP_RS02300 +0.8 2.4 NAD(P)H-dependent oxidoreductase compare
MMP_RS08235 +0.8 2.7 hypothetical protein compare
MMP_RS00105 +0.8 2.5 hypothetical protein compare
MMP_RS00980 +0.8 2.6 hypothetical protein compare
MMP_RS08755 +0.8 3.7 sodium:solute symporter family protein compare
MMP_RS00565 +0.8 2.8 CBS domain-containing protein compare
MMP_RS08670 +0.8 2.5 metallophosphoesterase compare
MMP_RS01965 +0.8 1.5 DUF1616 domain-containing protein compare
MMP_RS05455 +0.8 1.6 DUF167 domain-containing protein compare
MMP_RS01950 +0.8 2.5 hypothetical protein compare
MMP_RS06760 +0.8 0.9 hypothetical protein compare
MMP_RS07900 +0.8 1.0 YeeE/YedE family protein compare
MMP_RS07860 +0.8 0.3 hypothetical protein compare
MMP_RS08085 +0.7 3.1 hypothetical protein compare
MMP_RS02290 +0.7 1.7 MBL fold metallo-hydrolase compare
MMP_RS07985 +0.7 3.0 nitroreductase family protein compare
MMP_RS06375 +0.7 2.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS03100 +0.7 1.2 hypothetical protein compare
MMP_RS03270 +0.7 1.3 ADP-ribosylglycohydrolase family protein compare
MMP_RS09050 +0.7 1.3 CAP domain-containing protein compare
MMP_RS02910 +0.7 1.2 ABC transporter substrate-binding protein compare
MMP_RS06155 +0.7 1.1 DUF4186 domain-containing protein compare
MMP_RS07765 +0.7 2.2 sodium:alanine symporter family protein compare
MMP_RS05940 +0.7 1.6 corrinoid protein compare
MMP_RS05790 +0.7 2.0 HDIG domain-containing protein compare
MMP_RS00670 +0.7 1.5 TIM barrel protein compare
MMP_RS01990 +0.7 1.6 hypothetical protein compare
MMP_RS02810 +0.7 2.5 hypothetical protein compare
MMP_RS07590 +0.7 3.3 hypothetical protein compare
MMP_RS07085 +0.7 2.3 ribonuclease HII compare
MMP_RS07885 +0.7 1.2 tripartite tricarboxylate transporter permease compare
MMP_RS07855 +0.7 3.0 class I SAM-dependent methyltransferase compare
MMP_RS07095 +0.7 0.9 PspC domain-containing protein compare
MMP_RS08080 +0.7 2.2 YchF/TatD family DNA exonuclease compare
MMP_RS06045 +0.7 2.2 DNA polymerase compare
MMP_RS08700 +0.7 1.9 hypothetical protein compare
MMP_RS08610 +0.7 2.7 flagellar protein F compare
MMP_RS01650 +0.7 0.5 sulfurtransferase TusA family protein compare
MMP_RS00800 +0.7 2.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS03490 +0.7 0.8 DUF2115 domain-containing protein compare
MMP_RS04215 +0.7 1.3 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS08480 +0.7 2.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS05975 +0.6 0.7 hypothetical protein compare
MMP_RS08760 +0.6 1.4 hypothetical protein compare
MMP_RS07155 +0.6 2.1 MFS transporter compare
MMP_RS06335 +0.6 2.0 HAD family hydrolase compare
MMP_RS01635 +0.6 2.2 thiamine pyrophosphate-dependent enzyme compare
MMP_RS01430 +0.6 2.0 mechanosensitive ion channel family protein compare
MMP_RS04165 +0.6 1.5 TetR/AcrR family transcriptional regulator compare
MMP_RS06185 +0.6 2.1 thermonuclease family protein compare
MMP_RS08625 +0.6 2.8 type II/IV secretion system ATPase subunit compare
MMP_RS07915 +0.6 1.9 DUF4870 domain-containing protein compare
MMP_RS01010 +0.6 2.1 DUF4352 domain-containing protein compare
MMP_RS01855 +0.6 2.7 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS07150 +0.6 1.6 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS00655 +0.6 0.9 hypothetical protein compare
MMP_RS08775 +0.6 1.0 methanogenesis marker 9 domain-containing protein compare
MMP_RS01210 +0.6 2.1 sodium:solute symporter compare
MMP_RS08315 +0.6 0.9 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08535 +0.6 2.4 bis-aminopropyl spermidine synthase family protein compare
MMP_RS02540 +0.6 1.3 DUF2283 domain-containing protein compare
MMP_RS07840 +0.6 1.2 ribonuclease III compare
MMP_RS07925 +0.6 1.8 haloacid dehalogenase compare
MMP_RS08620 +0.6 1.8 flagellar accessory protein FlaH compare
MMP_RS00660 +0.6 2.3 alkaline phosphatase family protein compare
MMP_RS02375 +0.6 2.0 hypothetical protein compare
MMP_RS08430 +0.6 1.5 HAD family hydrolase compare
MMP_RS03910 +0.6 0.7 hypothetical protein compare
MMP_RS02390 +0.6 1.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS07345 +0.6 1.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS05505 +0.6 2.1 class IV adenylate cyclase compare
MMP_RS05470 +0.6 2.5 DUF523 and DUF1722 domain-containing protein compare
MMP_RS08470 +0.6 1.6 ATP-binding cassette domain-containing protein compare
MMP_RS04305 +0.6 0.7 hypothetical protein compare
MMP_RS07140 +0.6 3.2 TIGR00341 family protein compare
MMP_RS00085 +0.6 2.2 DNA cytosine methyltransferase compare
MMP_RS08275 +0.6 2.5 hypothetical protein compare
MMP_RS09065 +0.6 3.3 hypothetical protein compare
MMP_RS02605 +0.6 0.3 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08160 +0.6 1.1 EamA family transporter compare
MMP_RS08280 +0.6 0.6 proteasome assembly chaperone family protein compare
MMP_RS06325 +0.6 0.6 hypothetical protein compare
MMP_RS01675 +0.6 0.6 hypothetical protein compare
MMP_RS02690 +0.6 1.1 FmdE family protein compare
MMP_RS08390 +0.6 1.8 DUF5400 domain-containing protein compare
MMP_RS06990 +0.6 1.4 CatB-related O-acetyltransferase compare
MMP_RS05675 +0.6 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS04020 +0.6 1.3 hypothetical protein compare
MMP_RS06655 +0.6 2.0 glycoside hydrolase family 15 protein compare
MMP_RS06555 +0.6 1.0 cupin domain-containing protein compare
MMP_RS00855 +0.5 1.2 DUF367 family protein compare
MMP_RS08415 +0.5 0.8 radical SAM protein compare
MMP_RS07715 +0.5 1.5 YfcE family phosphodiesterase compare
MMP_RS00940 +0.5 1.8 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS06055 +0.5 1.5 peroxiredoxin compare
MMP_RS07595 +0.5 1.7 hypothetical protein compare
MMP_RS08490 +0.5 3.2 hypothetical protein compare
MMP_RS04315 +0.5 2.3 corrinoid protein compare
MMP_RS07650 +0.5 2.2 TldD/PmbA family protein compare
MMP_RS08410 +0.5 1.6 DUF169 domain-containing protein compare
MMP_RS08405 +0.5 1.9 MFS transporter compare
MMP_RS06070 +0.5 2.5 iron ABC transporter substrate-binding protein compare
MMP_RS08705 +0.5 1.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS03395 +0.5 0.7 hypothetical protein compare
MMP_RS02805 +0.5 0.5 HEPN domain-containing protein compare
MMP_RS01780 +0.5 1.6 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS02890 +0.5 1.6 TIGR00296 family protein compare
MMP_RS00650 +0.5 1.4 ABC transporter ATP-binding protein compare
MMP_RS02965 +0.5 1.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS06300 +0.5 1.3 ABC transporter substrate-binding protein compare
MMP_RS04325 +0.5 1.7 MtaA/CmuA family methyltransferase compare
MMP_RS04520 +0.5 0.9 nucleoside deaminase compare
MMP_RS06875 +0.5 1.2 FAD-dependent oxidoreductase compare
MMP_RS00235 +0.5 1.7 HDIG domain-containing protein compare
MMP_RS06500 +0.5 1.2 ATP-binding protein compare
MMP_RS03655 +0.5 1.7 DUF1894 domain-containing protein compare
MMP_RS01370 +0.5 1.7 acetate--CoA ligase family protein compare
MMP_RS00905 +0.5 0.7 phenylacetate--CoA ligase compare
MMP_RS01190 +0.5 1.3 cadmium-translocating P-type ATPase compare
MMP_RS03615 +0.5 2.0 4Fe-4S binding protein compare
MMP_RS07145 +0.5 1.2 AmmeMemoRadiSam system protein B compare
MMP_RS07100 +0.4 1.8 hypothetical protein compare
MMP_RS06100 +0.4 1.5 GNAT family N-acetyltransferase compare
MMP_RS08250 +0.4 1.4 pyruvate kinase compare
MMP_RS02380 +0.4 1.7 ATP-binding protein compare
MMP_RS03150 +0.4 1.6 phosphoglycerate mutase compare
MMP_RS08245 +0.4 1.5 DUF4013 domain-containing protein compare
MMP_RS07185 +0.4 1.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06495 +0.4 0.8 YkgJ family cysteine cluster protein compare
MMP_RS07560 +0.4 1.1 prefoldin subunit alpha compare
MMP_RS02170 +0.4 1.0 CBS domain-containing protein compare
MMP_RS00400 +0.4 1.0 tributyrin esterase compare
MMP_RS06385 +0.4 1.1 hypothetical protein compare
MMP_RS04740 +0.4 1.2 DUF473 domain-containing protein compare
MMP_RS07905 +0.4 0.9 DUF3343 domain-containing protein compare
MMP_RS08485 +0.4 1.8 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS01460 +0.4 0.6 hypothetical protein compare
MMP_RS01580 +0.4 1.3 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS02475 +0.4 0.6 hypothetical protein compare
MMP_RS08090 +0.4 0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 casamino acids across organisms