Experiment set4IT034 for Methanococcus maripaludis S2

200 most detrimental genes:

gene	name	fitness	t score	description
MMP_RS03615		+2.8	17.4	4Fe-4S binding protein
MMP_RS03620		+2.8	16.7	hypothetical protein
MMP_RS04550		+1.9	13.6	S-layer protein
MMP_RS08930		+1.2	2.2	hypothetical protein
MMP_RS03300		+1.0	1.3	TOBE domain-containing protein
MMP_RS08775		+1.0	5.4	methanogenesis marker 9 domain-containing protein
MMP_RS02470		+1.0	0.9	helix-turn-helix transcriptional regulator
MMP_RS05250		+1.0	1.7	NFYB/HAP3 family transcription factor subunit
MMP_RS05970		+0.9	3.1	class II SORL domain-containing protein
MMP_RS01940		+0.9	3.5	MoxR family ATPase
MMP_RS08860		+0.9	3.1	MinD/ParA family protein
MMP_RS07890		+0.9	2.7	OB-fold nucleic acid binding domain-containing protein
MMP_RS09025		+0.9	1.3	hypothetical protein
MMP_RS07840		+0.8	2.7	ribonuclease III
MMP_RS02490		+0.8	2.6	hypothetical protein
MMP_RS04520		+0.8	1.8	nucleoside deaminase
MMP_RS00240		+0.8	5.6	type II secretion system F family protein
MMP_RS06070		+0.8	4.6	iron ABC transporter substrate-binding protein
MMP_RS00395		+0.8	1.6	MGMT family protein
MMP_RS01310		+0.7	4.8	hypothetical protein
MMP_RS06540		+0.7	1.6	3-methyl-2-oxobutanoate dehydrogenase subunit VorB
MMP_RS08855		+0.7	3.5	hypothetical protein
MMP_RS01055		+0.7	2.9	hypothetical protein
MMP_RS02415		+0.7	2.2	site-specific integrase
MMP_RS00325		+0.7	1.2	RNA-binding protein
MMP_RS00990		+0.7	3.0	hypothetical protein
MMP_RS01750		+0.6	4.1	DUF63 family protein
MMP_RS02605		+0.6	0.7	MotA/TolQ/ExbB proton channel family protein
MMP_RS07125		+0.6	2.4	coenzyme F420-reducing hydrogenase FrhD protein
MMP_RS01295		+0.6	4.1	hypothetical protein
MMP_RS07330		+0.6	5.4	membrane protein
MMP_RS01290		+0.6	4.1	class III signal peptide-containing protein
MMP_RS06765		+0.6	2.8	flap endonuclease-1
MMP_RS01885		+0.6	3.7	Gfo/Idh/MocA family oxidoreductase
MMP_RS01280		+0.6	4.5	DUF515 domain-containing protein
MMP_RS06525		+0.6	1.0	YciI family protein
MMP_RS05635		+0.6	3.8	NAD-dependent epimerase/dehydratase family protein
MMP_RS02595		+0.6	1.1	putative zinc-binding protein
MMP_RS03220		+0.6	1.8	RNA 2' 3'-cyclic phosphodiesterase
MMP_RS06585		+0.6	1.3	DMT family protein
MMP_RS01285		+0.6	3.2	hypothetical protein
MMP_RS06990		+0.6	2.4	CatB-related O-acetyltransferase
MMP_RS06910		+0.6	2.9	RlmF-related methyltransferase
MMP_RS01305		+0.6	4.6	hypothetical protein
MMP_RS05020		+0.6	1.3	hypothetical protein
MMP_RS08980		+0.6	2.0	hypothetical protein
MMP_RS06920		+0.5	3.5	AAA family ATPase
MMP_RS02265		+0.5	2.0	nitroreductase family protein
MMP_RS02475		+0.5	1.8	hypothetical protein
MMP_RS02370		+0.5	2.2	NifB/NifX family molybdenum-iron cluster-binding protein
MMP_RS06365		+0.5	1.6	hypothetical protein
MMP_RS04145		+0.5	1.1	hypothetical protein
MMP_RS00245		+0.5	4.2	type II secretion system F family protein
MMP_RS08315		+0.5	0.9	S-methyl-5-thioribose-1-phosphate isomerase
MMP_RS06500		+0.5	3.0	ATP-binding protein
MMP_RS07560		+0.5	2.2	prefoldin subunit alpha
MMP_RS08215		+0.5	1.1	DUF483 domain-containing protein
MMP_RS01275		+0.5	2.1	class III signal peptide-containing protein
MMP_RS04090		+0.5	1.6	hypothetical protein
MMP_RS03090		+0.5	2.3	cation:proton antiporter
MMP_RS08275		+0.5	2.9	hypothetical protein
MMP_RS07860		+0.5	0.4	hypothetical protein
MMP_RS06905		+0.5	0.8	hypothetical protein
MMP_RS07770		+0.5	1.9	alanine racemase
MMP_RS00150		+0.5	2.2	AAA family ATPase
MMP_RS06530		+0.5	1.8	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMP_RS04060		+0.5	1.7	hypothetical protein
MMP_RS04305		+0.5	1.4	hypothetical protein
MMP_RS06520		+0.5	1.7	DUF1786 domain-containing protein
MMP_RS08090		+0.5	2.2	hypothetical protein
MMP_RS03385		+0.4	0.6	cation diffusion facilitator family transporter
MMP_RS01460		+0.4	1.4	hypothetical protein
MMP_RS03625		+0.4	1.9	cell wall-binding protein
MMP_RS02450		+0.4	1.8	hypothetical protein
MMP_RS01880		+0.4	2.6	DegT/DnrJ/EryC1/StrS family aminotransferase
MMP_RS03490		+0.4	0.8	DUF2115 domain-containing protein
MMP_RS06550		+0.4	1.8	AMP-binding protein
MMP_RS02175		+0.4	0.4	DUF1611 domain-containing protein
MMP_RS08620		+0.4	2.0	flagellar accessory protein FlaH
MMP_RS09045		+0.4	3.0	class III signal peptide-containing protein
MMP_RS05825		+0.4	1.2	peptidyl-prolyl cis-trans isomerase
MMP_RS02955		+0.4	1.1	DJ-1/PfpI family protein
MMP_RS07905		+0.4	1.5	DUF3343 domain-containing protein
MMP_RS03520		+0.4	0.8	YwbE family protein
MMP_RS03840		+0.4	2.0	hypothetical protein
MMP_RS01100		+0.4	0.8	ABC transporter ATP-binding protein
MMP_RS03440		+0.4	0.6	MoaD/ThiS family protein
MMP_RS06035		+0.4	2.7	glycosyltransferase family 2 protein
MMP_RS07130		+0.4	2.6	coenzyme F420 hydrogenase subunit gamma
MMP_RS01620		+0.4	1.9	hypothetical protein
MMP_RS06440		+0.4	2.4	CBS domain-containing protein
MMP_RS06870		+0.4	1.2	DedA family protein
MMP_RS06545		+0.4	1.4	ferredoxin family protein
MMP_RS03870		+0.4	1.6	purine NTPase
MMP_RS01315		+0.4	3.5	DUF2341 domain-containing protein
MMP_RS03125		+0.4	1.7	cell division ATPase MinD
MMP_RS08670		+0.4	2.0	metallophosphoesterase
MMP_RS01095		+0.4	1.4	iron ABC transporter permease
MMP_RS06175		+0.4	1.2	winged helix-turn-helix transcriptional regulator
MMP_RS06610		+0.4	1.6	DUF2334 domain-containing protein
MMP_RS00960		+0.4	1.3	iron export ABC transporter permease subunit FetB
MMP_RS04105		+0.4	1.8	MarR family transcriptional regulator
MMP_RS02870		+0.4	1.8	hypothetical protein
MMP_RS08200		+0.4	2.3	archaeosine synthase subunit alpha
MMP_RS01270		+0.4	2.6	prepilin peptidase
MMP_RS06150		+0.4	2.4	hypothetical protein
MMP_RS04050		+0.4	1.5	hypothetical protein
MMP_RS07895		+0.4	0.9	cytochrome c
MMP_RS07180		+0.4	1.9	DEAD/DEAH box helicase
MMP_RS01130		+0.4	1.5	flavoprotein
MMP_RS02390		+0.3	1.3	NifB/NifX family molybdenum-iron cluster-binding protein
MMP_RS01120		+0.3	1.6	permease
MMP_RS06940		+0.3	1.2	polyprenyl diphosphate synthase
MMP_RS09030		+0.3	1.6	hypothetical protein
MMP_RS05790		+0.3	1.5	HDIG domain-containing protein
MMP_RS07925		+0.3	0.7	haloacid dehalogenase
MMP_RS05785		+0.3	2.3	ATP-binding protein
MMP_RS05355		+0.3	0.4	hypothetical protein
MMP_RS07815		+0.3	0.5	DUF2120 domain-containing protein
MMP_RS03765		+0.3	1.8	CopG family ribbon-helix-helix protein
MMP_RS03540		+0.3	1.6	DUF2178 domain-containing protein
MMP_RS07100		+0.3	2.2	hypothetical protein
MMP_RS00250		+0.3	2.6	Flp pilus assembly complex ATPase component TadA
MMP_RS08665		+0.3	2.3	hypothetical protein
MMP_RS01950		+0.3	1.9	hypothetical protein
MMP_RS03235		+0.3	0.9	tRNA pseudouridine(13) synthase TruD
MMP_RS01495		+0.3	1.6	TraB/GumN family protein
MMP_RS02675		+0.3	1.0	hypothetical protein
MMP_RS04120		+0.3	1.9	hypothetical protein
MMP_RS08130		+0.3	2.0	IGHMBP2 family helicase
MMP_RS08785		+0.3	0.4	RNA-protein complex protein Nop10
MMP_RS07650		+0.3	1.7	TldD/PmbA family protein
MMP_RS03275		+0.3	1.0	TIGR00266 family protein
MMP_RS02890		+0.3	1.5	TIGR00296 family protein
MMP_RS06710		+0.3	1.2	selenium-binding protein
MMP_RS02795		+0.3	1.4	sulfate permease
MMP_RS07085		+0.3	1.7	ribonuclease HII
MMP_RS01515		+0.3	1.9	PINc/VapC family ATPase
MMP_RS07835		+0.3	1.3	TldD/PmbA family protein
MMP_RS06140		+0.3	0.8	radical SAM protein
MMP_RS01370		+0.3	1.7	acetate--CoA ligase family protein
MMP_RS06840		+0.3	0.3	DNA-directed RNA polymerase subunit N
MMP_RS03885		+0.3	2.0	tyrosine-type recombinase/integrase
MMP_RS01930		+0.3	2.2	hypothetical protein
MMP_RS08640		+0.3	1.8	TIM barrel protein
MMP_RS03020		+0.3	1.0	peptidylprolyl isomerase
MMP_RS00675		+0.3	0.3	nitroreductase family protein
MMP_RS07075		+0.3	1.2	phosphomannomutase/phosphoglucomutase
MMP_RS04945		+0.3	1.1	hypothetical protein
MMP_RS06915		+0.3	0.7	metallophosphoesterase
MMP_RS05695		+0.3	1.3	phospholipase D-like domain-containing protein
MMP_RS08630		+0.3	1.5	archaellar assembly protein FlaJ
MMP_RS02305		+0.3	1.5	DUF378 domain-containing protein
MMP_RS07805		+0.3	1.4	ABC transporter permease
MMP_RS01805		+0.3	0.9	NUDIX hydrolase
MMP_RS06010		+0.3	1.9	heavy metal translocating P-type ATPase
MMP_RS07140		+0.3	2.0	TIGR00341 family protein
MMP_RS04205		+0.3	1.0	carboxymuconolactone decarboxylase family protein
MMP_RS05325		+0.3	1.4	hypothetical protein
MMP_RS01980		+0.3	1.5	trimeric intracellular cation channel family protein
MMP_RS04020		+0.3	0.9	hypothetical protein
MMP_RS00880		+0.3	1.2	ribosome assembly RNA-binding protein YhbY
MMP_RS01945		+0.3	1.7	DUF4350 domain-containing protein
MMP_RS00320		+0.3	0.5	class I SAM-dependent methyltransferase
MMP_RS00940		+0.3	1.7	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
MMP_RS06005		+0.3	1.1	heavy-metal-associated domain-containing protein
MMP_RS08675		+0.3	0.6	class III signal peptide-containing protein
MMP_RS03065		+0.3	0.8	AzlC family ABC transporter permease
MMP_RS05820		+0.3	1.1	RNA-binding transcriptional accessory protein
MMP_RS03675		+0.3	1.4	RimK family alpha-L-glutamate ligase
MMP_RS02540		+0.3	1.4	DUF2283 domain-containing protein
MMP_RS01865		+0.3	0.5	GPR1/FUN34/YaaH family transporter
MMP_RS02915		+0.2	1.1	amino acid ABC transporter permease
MMP_RS06225		+0.2	1.5	DNA double-strand break repair nuclease NurA
MMP_RS05720		+0.2	0.8	signal recognition particle subunit SRP19/SEC65 family protein
MMP_RS03150		+0.2	1.4	phosphoglycerate mutase
MMP_RS06055		+0.2	1.1	peroxiredoxin
MMP_RS07145		+0.2	1.1	AmmeMemoRadiSam system protein B
MMP_RS01745		+0.2	0.8	AMP phosphorylase
MMP_RS06335		+0.2	1.0	HAD family hydrolase
MMP_RS01210		+0.2	1.6	sodium:solute symporter
MMP_RS02480		+0.2	0.5	hypothetical protein
MMP_RS08260		+0.2	1.3	DUF99 family protein
MMP_RS04960		+0.2	1.5	cytochrome c biogenesis CcdA family protein
MMP_RS00955		+0.2	1.5	coenzyme gamma-F420-2:alpha-L-glutamate ligase
MMP_RS04840		+0.2	1.4	response regulator
MMP_RS00935		+0.2	1.6	MATE family efflux transporter
MMP_RS06000		+0.2	1.3	divalent-cation tolerance protein CutA
MMP_RS02825		+0.2	1.4	mechanosensitive ion channel family protein
MMP_RS01875		+0.2	1.5	N-acetyltransferase
MMP_RS08470		+0.2	1.1	ATP-binding cassette domain-containing protein
MMP_RS04285		+0.2	1.5	Ni/Fe hydrogenase subunit alpha
MMP_RS00185		+0.2	1.6	potassium channel protein
MMP_RS03670		+0.2	0.7	DUF1890 domain-containing protein
MMP_RS04430		+0.2	1.4	DUF1847 domain-containing protein
MMP_RS01660		+0.2	1.0	hypothetical protein
MMP_RS02410		+0.2	0.6	ABC transporter substrate-binding protein
MMP_RS01935		+0.2	1.5	DUF58 domain-containing protein
MMP_RS02635		+0.2	1.3	class I SAM-dependent methyltransferase
MMP_RS06080		+0.2	1.5	radical SAM protein

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments