Experiment set4IT032 for Rhodanobacter denitrificans FW104-10B01

Compare to:

R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

200 most important genes:

  gene name fitness t score description  
LRK54_RS04245 -2.6 -1.9 BON domain-containing protein compare
LRK54_RS00490 -2.5 -1.3 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
LRK54_RS14845 -2.5 -1.3 LysR family transcriptional regulator compare
LRK54_RS10740 -2.4 -1.6 Lrp/AsnC family transcriptional regulator compare
LRK54_RS04940 -2.2 -2.6 zinc ribbon domain-containing protein compare
LRK54_RS14560 -2.1 -5.0 hypothetical protein compare
LRK54_RS04185 -2.1 -1.4 chemotaxis protein CheW compare
LRK54_RS10570 -2.0 -2.0 accessory factor UbiK family protein compare
LRK54_RS15325 -2.0 -1.0 hypothetical protein compare
LRK54_RS12145 -2.0 -4.0 PepSY domain-containing protein compare
LRK54_RS06240 -2.0 -1.7 hypothetical protein compare
LRK54_RS10170 -1.9 -10.3 YbaY family lipoprotein compare
LRK54_RS10620 -1.8 -2.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
LRK54_RS09725 -1.7 -1.6 phosphopantetheine-binding protein compare
LRK54_RS08465 -1.7 -13.2 tetratricopeptide repeat protein compare
LRK54_RS00410 -1.7 -1.6 polyhydroxyalkanoic acid system family protein compare
LRK54_RS00575 -1.7 -1.5 hypothetical protein compare
LRK54_RS15730 -1.7 -2.8 organic hydroperoxide resistance protein compare
LRK54_RS13350 -1.6 -1.1 hypothetical protein compare
LRK54_RS04545 -1.6 -2.7 hemin uptake protein HemP compare
LRK54_RS04540 -1.6 -4.6 hypothetical protein compare
LRK54_RS14485 -1.6 -8.3 polyketide cyclase compare
LRK54_RS02445 -1.6 -1.1 membrane protein insertion efficiency factor YidD compare
LRK54_RS16350 -1.6 -1.1 helix-turn-helix domain-containing protein compare
LRK54_RS07195 -1.5 -1.0 hypothetical protein compare
LRK54_RS02710 -1.5 -1.0 pentapeptide MXKDX repeat protein compare
LRK54_RS07585 -1.5 -6.4 monovalent cation/H+ antiporter subunit D compare
LRK54_RS04965 -1.5 -6.8 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
LRK54_RS06155 -1.4 -1.0 cysteine dioxygenase compare
LRK54_RS02815 -1.4 -1.0 hypothetical protein compare
LRK54_RS15650 -1.4 -1.9 AzlC family ABC transporter permease compare
LRK54_RS05770 -1.3 -5.4 energy transducer TonB compare
LRK54_RS07580 -1.3 -2.4 Na+/H+ antiporter subunit E compare
LRK54_RS02520 -1.3 -1.6 cytochrome c biogenesis protein CcsA compare
LRK54_RS10865 -1.3 -5.4 DEAD/DEAH box helicase compare
LRK54_RS06515 -1.3 -2.2 rod shape-determining protein MreD compare
LRK54_RS06420 -1.3 -0.9 hypothetical protein compare
LRK54_RS03765 -1.3 -1.6 hypothetical protein compare
LRK54_RS07460 -1.3 -1.5 hypothetical protein compare
LRK54_RS07430 -1.3 -2.2 nuclear transport factor 2 family protein compare
LRK54_RS17025 -1.3 -0.9 cold-shock protein compare
LRK54_RS04230 -1.3 -2.8 HAMP domain-containing histidine kinase compare
LRK54_RS11750 -1.2 -2.4 YicC family protein compare
LRK54_RS02435 -1.2 -6.2 TonB-dependent siderophore receptor compare
LRK54_RS16460 -1.2 -2.7 hypothetical protein compare
LRK54_RS17160 -1.2 -1.4 Eco57I restriction-modification methylase domain-containing protein compare
LRK54_RS05385 -1.2 -3.3 CPBP family intramembrane metalloprotease compare
LRK54_RS05235 -1.2 -3.1 cytochrome b compare
LRK54_RS05890 -1.2 -3.5 DUF6348 family protein compare
LRK54_RS03880 -1.2 -6.0 pilin compare
LRK54_RS11255 -1.2 -3.0 DUF2383 domain-containing protein compare
LRK54_RS03930 -1.2 -2.6 glycosyltransferase family 2 protein compare
LRK54_RS04240 -1.2 -4.6 TonB-dependent siderophore receptor compare
LRK54_RS01700 -1.2 -1.9 tRNA pseudouridine(38-40) synthase TruA compare
LRK54_RS08025 -1.2 -1.1 NAD(P)-dependent oxidoreductase compare
LRK54_RS10640 -1.1 -0.8 SCP2 sterol-binding domain-containing protein compare
LRK54_RS17660 -1.1 -1.9 hypothetical protein compare
LRK54_RS14580 -1.1 -0.8 hypothetical protein compare
LRK54_RS16010 -1.1 -1.3 ribonuclease D compare
LRK54_RS04235 -1.1 -3.6 response regulator transcription factor compare
LRK54_RS07950 -1.1 -2.2 GIY-YIG nuclease family protein compare
LRK54_RS16815 -1.1 -1.3 hypothetical protein compare
LRK54_RS08615 -1.1 -6.8 M3 family metallopeptidase compare
LRK54_RS07575 -1.1 -2.1 K+/H+ antiporter subunit F compare
LRK54_RS17850 -1.1 -1.5 DUF2282 domain-containing protein compare
LRK54_RS10660 -1.1 -0.7 DUF4156 domain-containing protein compare
LRK54_RS11890 -1.1 -1.0 O-acetyl-ADP-ribose deacetylase compare
LRK54_RS15555 -1.1 -0.7 YciI family protein compare
LRK54_RS03920 -1.1 -1.2 hypothetical protein compare
LRK54_RS00525 -1.1 -1.5 hypothetical protein compare
LRK54_RS10125 -1.0 -2.7 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB compare
LRK54_RS08885 -1.0 -2.4 hypothetical protein compare
LRK54_RS03700 -1.0 -1.0 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase compare
LRK54_RS13230 -1.0 -2.4 glycosyltransferase compare
LRK54_RS11955 -1.0 -6.1 drug/metabolite exporter YedA compare
LRK54_RS17370 -1.0 -1.5 hypothetical protein compare
LRK54_RS16110 -1.0 -2.8 polyhydroxyalkanoate synthesis repressor PhaR compare
LRK54_RS06875 -1.0 -0.7 YiiD C-terminal domain-containing protein compare
LRK54_RS12330 -1.0 -1.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
LRK54_RS12845 -1.0 -3.8 phosphoenolpyruvate--protein phosphotransferase compare
LRK54_RS03375 -1.0 -2.4 metalloprotease PmbA compare
LRK54_RS04060 -1.0 -3.0 isoaspartyl peptidase/L-asparaginase compare
LRK54_RS13785 -1.0 -2.2 ClpXP protease specificity-enhancing factor compare
LRK54_RS08605 -1.0 -2.9 hypothetical protein compare
LRK54_RS02805 -0.9 -0.9 thioredoxin compare
LRK54_RS04920 -0.9 -1.4 YebC/PmpR family DNA-binding transcriptional regulator compare
LRK54_RS02335 -0.9 -1.4 FUSC family protein compare
LRK54_RS09340 -0.9 -2.5 hypothetical protein compare
LRK54_RS13800 -0.9 -3.0 DUF1631 domain-containing protein compare
LRK54_RS17135 -0.9 -0.7 hypothetical protein compare
LRK54_RS09865 -0.9 -0.9 CRISPR-associated endonuclease Cas2 compare
LRK54_RS11935 -0.9 -1.5 ABC transporter ATP-binding protein compare
LRK54_RS16880 -0.9 -5.4 DUF1249 domain-containing protein compare
LRK54_RS00810 -0.9 -0.9 SMC-Scp complex subunit ScpB compare
LRK54_RS03745 -0.9 -2.0 NAD(P)H:quinone oxidoreductase compare
LRK54_RS02030 -0.9 -2.3 MmcQ/YjbR family DNA-binding protein compare
LRK54_RS06725 -0.9 -1.8 zinc-finger domain-containing protein compare
LRK54_RS00625 -0.9 -3.3 GTPase HflX compare
LRK54_RS03395 -0.9 -4.7 metalloprotease TldD compare
LRK54_RS17600 -0.9 -1.3 hypothetical protein compare
LRK54_RS02020 -0.9 -0.8 DUF2058 domain-containing protein compare
LRK54_RS11585 -0.9 -4.6 cAMP-activated global transcriptional regulator CRP compare
LRK54_RS04195 -0.9 -2.8 twitching motility response regulator PilG compare
LRK54_RS17855 -0.9 -1.2 (2Fe-2S)-binding protein compare
LRK54_RS02140 -0.8 -2.4 hypothetical protein compare
LRK54_RS02750 -0.8 -1.4 hypothetical protein compare
LRK54_RS12745 -0.8 -2.6 tetratricopeptide repeat protein compare
LRK54_RS05940 -0.8 -1.7 hypothetical protein compare
LRK54_RS16600 -0.8 -2.0 aminopeptidase P family protein compare
LRK54_RS03875 -0.8 -5.1 pilin compare
LRK54_RS06810 -0.8 -2.3 50S ribosomal protein L11 methyltransferase compare
LRK54_RS09110 -0.8 -4.6 phospholipase D family protein compare
LRK54_RS11395 -0.8 -2.3 proteobacterial dedicated sortase system response regulator compare
LRK54_RS14370 -0.8 -1.4 Lrp/AsnC family transcriptional regulator compare
LRK54_RS09005 -0.8 -1.9 response regulator transcription factor compare
LRK54_RS00780 -0.8 -3.1 LysR family transcriptional regulator compare
LRK54_RS06030 -0.8 -1.4 phage baseplate assembly protein V compare
LRK54_RS01410 -0.8 -3.0 ABC transporter ATP-binding protein/permease compare
LRK54_RS10655 -0.8 -4.0 insulinase family protein compare
LRK54_RS04375 -0.8 -2.1 NfeD family protein compare
LRK54_RS05260 -0.8 -1.7 hypothetical protein compare
LRK54_RS07595 -0.8 -4.7 monovalent cation/H+ antiporter subunit A compare
LRK54_RS11505 -0.8 -2.8 SH3 domain-containing protein compare
LRK54_RS08355 -0.8 -3.4 hypothetical protein compare
LRK54_RS10200 -0.8 -5.4 aminopeptidase N compare
LRK54_RS01815 -0.8 -2.5 DUF2147 domain-containing protein compare
LRK54_RS14830 -0.8 -4.5 molecular chaperone HtpG compare
LRK54_RS06255 -0.8 -0.9 YbaN family protein compare
LRK54_RS07815 -0.8 -2.0 MFS transporter compare
LRK54_RS13640 -0.8 -2.4 chemotaxis protein CheA compare
LRK54_RS14670 -0.8 -0.5 NrsF family protein compare
LRK54_RS05255 -0.8 -2.8 L-serine ammonia-lyase compare
LRK54_RS09000 -0.8 -1.7 HAMP domain-containing histidine kinase compare
LRK54_RS12190 -0.8 -0.7 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
LRK54_RS06895 -0.8 -0.6 hotdog fold thioesterase compare
LRK54_RS14395 -0.8 -1.8 MAPEG family protein compare
LRK54_RS15020 -0.8 -2.1 polyphosphate kinase 1 compare
LRK54_RS05490 -0.8 -2.0 energy transducer TonB compare
LRK54_RS03770 -0.8 -2.2 hypothetical protein compare
LRK54_RS15240 -0.8 -2.1 FTR1 family protein compare
LRK54_RS11995 -0.8 -2.9 tRNA-Gly compare
LRK54_RS12375 -0.7 -3.8 leucyl aminopeptidase compare
LRK54_RS02890 -0.7 -4.4 amino acid permease compare
LRK54_RS04270 -0.7 -2.8 cobalamin-binding protein compare
LRK54_RS02940 -0.7 -3.4 sulfite reductase flavoprotein subunit alpha compare
LRK54_RS06605 -0.7 -1.9 LON peptidase substrate-binding domain-containing protein compare
LRK54_RS01350 -0.7 -2.1 SPOR domain-containing protein compare
LRK54_RS15645 -0.7 -1.3 MarR family transcriptional regulator compare
LRK54_RS10210 -0.7 -1.5 pyridoxal-phosphate dependent enzyme compare
LRK54_RS17805 -0.7 -1.7 DUF3330 domain-containing protein compare
LRK54_RS04190 -0.7 -1.3 response regulator compare
LRK54_RS13805 -0.7 -1.5 hypothetical protein compare
LRK54_RS04740 -0.7 -1.6 RDD family protein compare
LRK54_RS07105 -0.7 -2.9 twin transmembrane helix small protein compare
LRK54_RS01010 -0.7 -1.9 S-methyl-5-thioribose-1-phosphate isomerase compare
LRK54_RS08920 -0.7 -1.6 hypothetical protein compare
LRK54_RS00160 -0.7 -3.8 phospholipase D-like domain-containing protein compare
LRK54_RS02110 -0.7 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
LRK54_RS12700 -0.7 -1.8 hypothetical protein compare
LRK54_RS14000 -0.7 -1.3 nitrate reductase molybdenum cofactor assembly chaperone compare
LRK54_RS09750 -0.7 -3.5 MMPL family transporter compare
LRK54_RS13675 -0.7 -0.7 methyl-accepting chemotaxis protein compare
LRK54_RS04370 -0.7 -1.3 threonine/serine exporter family protein compare
LRK54_RS00750 -0.7 -0.7 response regulator transcription factor compare
LRK54_RS02825 -0.7 -1.8 sigma-70 family RNA polymerase sigma factor compare
LRK54_RS07045 -0.7 -1.8 hypothetical protein compare
LRK54_RS06815 -0.7 -1.8 zinc-ribbon and DUF3426 domain-containing protein compare
LRK54_RS10330 -0.7 -0.8 3-isopropylmalate dehydratase small subunit compare
LRK54_RS02365 -0.7 -0.9 ABC transporter ATP-binding protein compare
LRK54_RS04080 -0.7 -2.9 3-oxoacid CoA-transferase subunit B compare
LRK54_RS16530 -0.7 -2.1 aldehyde reductase compare
LRK54_RS13505 -0.7 -1.6 flagellar assembly protein FliH compare
LRK54_RS02260 -0.7 -2.2 hypothetical protein compare
LRK54_RS16480 -0.7 -1.7 NAD-dependent protein deacetylase compare
LRK54_RS10925 -0.7 -1.0 cell division ATP-binding protein FtsE compare
LRK54_RS00910 -0.7 -2.4 siroheme synthase CysG compare
LRK54_RS02880 -0.7 -4.4 M13 family peptidase compare
LRK54_RS15235 -0.7 -2.7 cupredoxin domain-containing protein compare
LRK54_RS06205 -0.7 -1.9 HAD family hydrolase compare
LRK54_RS17090 -0.7 -1.3 isochorismatase family protein compare
LRK54_RS03055 -0.7 -2.3 non-heme iron oxygenase ferredoxin subunit compare
LRK54_RS11055 -0.7 -2.9 lipid-binding SYLF domain-containing protein compare
LRK54_RS11895 -0.7 -2.4 MarR family transcriptional regulator compare
LRK54_RS08880 -0.7 -3.1 hypothetical protein compare
LRK54_RS00875 -0.7 -1.1 hypothetical protein compare
LRK54_RS09755 -0.7 -2.3 3-oxoacyl-ACP reductase compare
LRK54_RS12005 -0.7 -0.8 30S ribosomal protein S6--L-glutamate ligase compare
LRK54_RS15970 -0.6 -1.1 DUF4190 domain-containing protein compare
LRK54_RS01930 -0.6 -1.1 hypothetical protein compare
LRK54_RS09545 -0.6 -2.1 hypothetical protein compare
LRK54_RS01340 -0.6 -3.2 amidophosphoribosyltransferase compare
LRK54_RS06290 -0.6 -2.4 Hsp20/alpha crystallin family protein compare
LRK54_RS00485 -0.6 -1.7 hypothetical protein compare
LRK54_RS07540 -0.6 -1.7 DUF2878 domain-containing protein compare
LRK54_RS09835 -0.6 -1.8 c-type cytochrome compare
LRK54_RS17650 -0.6 -1.9 inorganic diphosphatase compare
LRK54_RS17980 -0.6 -2.9 molecular chaperone DnaJ compare
LRK54_RS05855 -0.6 -1.0 MarR family transcriptional regulator compare
LRK54_RS09385 -0.6 -0.9 DUF3363 domain-containing protein compare
LRK54_RS08065 -0.6 -3.0 ATP-binding protein compare


Specific Phenotypes

For 18 genes in this experiment

For stress Chromium(III) Chloride Hexahydrate in Rhodanobacter denitrificans FW104-10B01

For stress Chromium(III) Chloride Hexahydrate across organisms