| | gene | name | fitness | t score | description | |
|---|
| Rru_A0058 | | -4.2 | -1.6 | Dihydrokaempferol 4-reductase (NCBI) | compare |
| Rru_A3594 | | -4.1 | -3.8 | Histidine biosynthesis protein HisF (NCBI) | compare |
| Rru_A0432 | | -4.0 | -7.2 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| Rru_A1897 | | -3.7 | -2.9 | Indole-3-glycerol-phosphate synthase (NCBI) | compare |
| Rru_A1771 | | -3.7 | -0.5 | Sec-independent periplasmic protein translocase (NCBI) | compare |
| Rru_A1854 | | -3.5 | -9.3 | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | compare |
| Rru_A1620 | | -3.5 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A3428 | | -3.5 | -13.2 | Tryptophan synthase (NCBI) | compare |
| Rru_A1675 | | -3.5 | -10.7 | Cytochrome c assembly protein (NCBI) | compare |
| Rru_A1530 | | -3.4 | -22.9 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| Rru_A2886 | | -3.3 | -17.2 | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) | compare |
| Rru_A3571 | | -3.3 | -2.8 | Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) | compare |
| Rru_A2885 | | -3.3 | -13.3 | Carbamoyl-phosphate synthase, small subunit (NCBI) | compare |
| Rru_A0469 | | -3.3 | -10.4 | Ketol-acid reductoisomerase (NCBI) | compare |
| Rru_A3190 | | -3.2 | -2.1 | Aspartate carbamoyltransferase (NCBI) | compare |
| Rru_A0467 | | -3.1 | -11.9 | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | compare |
| Rru_A1189 | | -3.1 | -10.7 | 3-isopropylmalate dehydratase large subunit region (NCBI) | compare |
| Rru_A1827 | | -3.1 | -11.0 | Glycine hydroxymethyltransferase (NCBI) | compare |
| Rru_A3202 | | -3.0 | -17.1 | DNA topoisomerase (NCBI) | compare |
| Rru_A3276 | | -2.9 | -2.9 | Ornithine carbamoyltransferase (NCBI) | compare |
| Rru_A3427 | | -2.9 | -13.9 | Tryptophan synthase, beta chain (NCBI) | compare |
| Rru_A3380 | | -2.9 | -2.4 | hypothetical protein (NCBI) | compare |
| Rru_A3267 | | -2.8 | -5.9 | Methionine biosynthesis MetW (NCBI) | compare |
| Rru_A1105 | | -2.8 | -5.2 | tRNA synthetase, class II (G, H, P and S) (NCBI) | compare |
| Rru_A3214 | | -2.8 | -10.0 | O-succinylhomoserine sulfhydrylase (NCBI) | compare |
| Rru_A3162 | | -2.8 | -9.7 | Prephenate dehydratase (NCBI) | compare |
| Rru_A3751 | | -2.8 | -7.9 | Argininosuccinate synthase (NCBI) | compare |
| Rru_A1786 | | -2.8 | -13.2 | Dihydroxy-acid dehydratase (NCBI) | compare |
| Rru_A1928 | | -2.6 | -8.8 | Yeast 2-isopropylmalate synthase (NCBI) | compare |
| Rru_A0468 | | -2.6 | -2.6 | Acetolactate synthase, small subunit (NCBI) | compare |
| Rru_A0644 | | -2.6 | -4.5 | hypothetical protein (NCBI) | compare |
| Rru_A2771 | | -2.6 | -4.4 | Histidinol dehydrogenase (NCBI) | compare |
| Rru_A3277 | | -2.5 | -3.7 | Acetylornithine and succinylornithine aminotransferase (NCBI) | compare |
| Rru_A3266 | | -2.4 | -6.1 | Homoserine O-acetyltransferase (NCBI) | compare |
| Rru_A3165 | | -2.3 | -4.0 | Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) | compare |
| Rru_A2574 | | -2.3 | -0.7 | Transcriptional Regulator, BadM/Rrf2 family (NCBI) | compare |
| Rru_A1436 | | -2.3 | -6.8 | Histidine Kinase (NCBI) | compare |
| Rru_A1798 | | -2.3 | -10.7 | Type I secretion outer membrane protein, TolC (NCBI) | compare |
| Rru_A2772 | | -2.3 | -1.3 | ATP phosphoribosyltransferase (NCBI) | compare |
| Rru_A1593 | | -2.3 | -9.1 | Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) | compare |
| Rru_A1896 | | -2.2 | -2.4 | Anthranilate phosphoribosyl transferase (NCBI) | compare |
| Rru_A1191 | | -2.1 | -5.9 | 3-isopropylmalate dehydrogenase (NCBI) | compare |
| Rru_A3596 | | -2.1 | -3.2 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) | compare |
| Rru_A3642 | | -2.1 | -2.1 | Negative regulator of class I heat shock protein (NCBI) | compare |
| Rru_A2346 | | -2.0 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A3548 | | -2.0 | -9.0 | Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) | compare |
| Rru_A0574 | | -2.0 | -3.2 | Carboxylyase-related protein (NCBI) | compare |
| Rru_A0764 | | -1.9 | -2.4 | HesB/YadR/YfhF (NCBI) | compare |
| Rru_A3264 | | -1.9 | -4.0 | Histidinol-phosphate aminotransferase (NCBI) | compare |
| Rru_A1883 | | -1.9 | -2.1 | Magnesium and cobalt transport protein CorA (NCBI) | compare |
| Rru_A1085 | | -1.9 | -1.7 | Metallophosphoesterase (NCBI) | compare |
| Rru_A1435 | | -1.9 | -5.1 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A1047 | | -1.8 | -6.0 | 6-phosphofructokinase (NCBI) | compare |
| Rru_A0397 | | -1.8 | -2.8 | Argininosuccinate lyase (NCBI) | compare |
| Rru_A2715 | | -1.8 | -9.5 | Acyltransferase 3 (NCBI) | compare |
| Rru_A1019 | | -1.8 | -1.7 | FAD dependent oxidoreductase (NCBI) | compare |
| Rru_A0296 | | -1.8 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A2377 | | -1.8 | -0.2 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) | compare |
| Rru_A2507 | | -1.8 | -11.1 | Orotate phosphoribosyl transferase (NCBI) | compare |
| Rru_A3424 | | -1.8 | -1.7 | Orotidine-5'-phosphate decarboxylase (NCBI) | compare |
| Rru_A2936 | | -1.8 | -5.8 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A0514 | | -1.7 | -7.9 | Dihydroorotate dehydrogenase 2 (NCBI) | compare |
| Rru_A0152 | | -1.7 | -2.0 | hypothetical protein (NCBI) | compare |
| Rru_A1437 | | -1.7 | -6.1 | Sodium:dicarboxylate symporter (NCBI) | compare |
| Rru_A2935 | | -1.7 | -4.0 | PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) | compare |
| Rru_A1309 | | -1.7 | -9.3 | acetoacetyl-CoA reductase (NCBI) | compare |
| Rru_A1839 | | -1.7 | -3.0 | TRAP-type C4-dicarboxylate transport system periplasmic component-like (NCBI) | compare |
| Rru_A0193 | | -1.7 | -1.6 | Beta-ketoacyl synthase (NCBI) | compare |
| Rru_A1898 | | -1.7 | -0.9 | SOS-response transcriptional repressor, LexA (NCBI) | compare |
| Rru_A1432 | | -1.7 | -8.7 | Nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| Rru_A1837 | | -1.6 | -4.9 | Porphobilinogen synthase (NCBI) | compare |
| Rru_A3614 | | -1.6 | -2.7 | Maf-like protein (NCBI) | compare |
| Rru_A1308 | | -1.6 | -13.0 | Acyl-CoA dehydrogenase (NCBI) | compare |
| Rru_A0613 | | -1.6 | -5.0 | Bacteriochlorophyll 4-vinyl reductase (NCBI) | compare |
| Rru_A1505 | | -1.6 | -1.8 | Allophanate hydrolase subunit 2 (NCBI) | compare |
| Rru_A0253 | | -1.5 | -8.5 | GDP-mannose 4,6-dehydratase (NCBI) | compare |
| Rru_A3640 | | -1.5 | -0.5 | Ham1-like protein (NCBI) | compare |
| Rru_A2549 | | -1.5 | -5.3 | HAD-superfamily hydrolase subfamily IIB (NCBI) | compare |
| Rru_A0213 | | -1.5 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A2224 | | -1.5 | -1.0 | Transcriptional Regulator, MarR family (NCBI) | compare |
| Rru_A3378 | | -1.5 | -4.2 | hypothetical protein (NCBI) | compare |
| Rru_A2908 | | -1.5 | -3.3 | Protein of unknown function DUF140 (NCBI) | compare |
| Rru_A3139 | | -1.5 | -6.1 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A2424 | | -1.4 | -3.9 | Gamma-glutamyltranspeptidase (NCBI) | compare |
| Rru_A1800 | | -1.4 | -3.6 | Prevent-host-death protein (NCBI) | compare |
| Rru_A2242 | | -1.4 | -1.5 | Glutathione-dependent formaldehyde-activating, GFA (NCBI) | compare |
| Rru_A2761 | | -1.4 | -1.8 | Acyltransferase 3 (NCBI) | compare |
| Rru_A1310 | | -1.4 | -5.7 | Acetyl-CoA C-acyltransferase (NCBI) | compare |
| Rru_A2161 | | -1.4 | -9.7 | Polyphosphate kinase (NCBI) | compare |
| Rru_A3191 | | -1.4 | -7.0 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A1239 | | -1.4 | -1.0 | Glutamate 5-kinase, ProB-related (NCBI) | compare |
| Rru_A2201 | | -1.4 | -3.2 | Peptidase S1C, Do (NCBI) | compare |
| Rru_A2978 | | -1.4 | -5.3 | Chlorophyllide reductase subunit Z (NCBI) | compare |
| Rru_A1434 | | -1.4 | -7.6 | Quinolinate synthetase A (NCBI) | compare |
| Rru_A2455 | | -1.4 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A3186 | | -1.3 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A3362 | | -1.3 | -1.9 | Uroporphyrin-III C-methyltransferase-like (NCBI) | compare |
| Rru_A0556 | | -1.3 | -6.4 | Formyltetrahydrofolate deformylase (NCBI) | compare |
| Rru_B0046 | | -1.3 | -8.4 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (NCBI) | compare |
| Rru_A2345 | | -1.3 | -6.9 | Glycosyl transferase, group 1 (NCBI) | compare |
| Rru_A2351 | | -1.3 | -6.4 | Macrocin-O-methyltransferase (NCBI) | compare |
| Rru_A2275 | | -1.3 | -1.5 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A1855 | | -1.3 | -5.4 | hypothetical protein (NCBI) | compare |
| Rru_A0291 | | -1.3 | -1.7 | hypothetical protein (NCBI) | compare |
| Rru_A3338 | | -1.3 | -2.2 | Protein of unknown function DUF37 (NCBI) | compare |
| Rru_A0006 | | -1.3 | -1.3 | Plasmid maintenance system antidote protein (NCBI) | compare |
| Rru_A1493 | | -1.3 | -1.4 | UDP-N-acetylglucosamine 2-epimerase (NCBI) | compare |
| Rru_A2979 | | -1.3 | -5.3 | Chlorophyllide reductase subunit Y (NCBI) | compare |
| Rru_A3003 | | -1.3 | -2.6 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A2330 | | -1.3 | -2.0 | Response regulator receiver domain protein (CheY) (NCBI) | compare |
| Rru_A0493 | | -1.3 | -6.3 | Phytoene desaturase (NCBI) | compare |
| Rru_A2348 | | -1.3 | -8.4 | Glycosyl transferase (NCBI) | compare |
| Rru_A1472 | | -1.3 | -0.8 | Acetate CoA-transferase (NCBI) | compare |
| Rru_A1044 | | -1.2 | -1.5 | Peptide deformylase (NCBI) | compare |
| Rru_A2268 | | -1.2 | -1.7 | Nitrogen fixation protein NifW (NCBI) | compare |
| Rru_A2482 | | -1.2 | -1.8 | transcription regulator containing helix turn helix domain (NCBI) | compare |
| Rru_A2492 | | -1.2 | -1.7 | Glycosyl transferase, group 1 (NCBI) | compare |
| Rru_A3146 | | -1.2 | -1.6 | hypothetical protein (NCBI) | compare |
| Rru_A2184 | | -1.2 | -0.2 | Pyridoxamine 5'-phosphate oxidase-related, FMN-binding (NCBI) | compare |
| Rru_A1321 | | -1.2 | -1.6 | Biotin--acetyl-CoA-carboxylase ligase (NCBI) | compare |
| Rru_A2501 | | -1.2 | -1.1 | conserved hypothetical cytosolic protein (NCBI) | compare |
| Rru_A1865 | | -1.2 | -5.2 | Dihydrodipicolinate synthase subfamily (NCBI) | compare |
| Rru_A1167 | | -1.2 | -1.5 | putative hydrogenase expression/formation protein HupK (NCBI) | compare |
| Rru_A2922 | | -1.2 | -4.1 | hypothetical protein (NCBI) | compare |
| Rru_A2494 | | -1.2 | -3.9 | Glycosyl transferase, family 2 (NCBI) | compare |
| Rru_A1444 | | -1.2 | -5.5 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A3574 | | -1.2 | -3.0 | Rieske (2Fe-2S) region (NCBI) | compare |
| Rru_B0005 | | -1.2 | -1.0 | Glycosyl transferase (NCBI) | compare |
| Rru_A1487 | | -1.2 | -4.5 | Polysaccharide export protein (NCBI) | compare |
| Rru_A0610 | | -1.2 | -3.3 | hypothetical protein (NCBI) | compare |
| Rru_A0620 | | -1.2 | -3.5 | Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein (NCBI) | compare |
| Rru_A1814 | | -1.2 | -0.8 | Carbon monoxide dehydrogenase subunit G (NCBI) | compare |
| Rru_A2975 | | -1.2 | -5.1 | Photosynthetic reaction centre protein L subunit (NCBI) | compare |
| Rru_A3536 | | -1.2 | -2.3 | Nitroreductase (NCBI) | compare |
| Rru_A3770 | | -1.2 | -2.4 | tRNA-i(6)A37 modification enzyme MiaB (NCBI) | compare |
| Rru_A1445 | | -1.1 | -6.2 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A1031 | | -1.1 | -2.3 | Ethanolamine ammonia-lyase (NCBI) | compare |
| Rru_A1937 | | -1.1 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A3797 | | -1.1 | -4.1 | 2-polyprenylphenol 6-hydroxylase (NCBI) | compare |
| Rru_A3010 | | -1.1 | -4.3 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A2500 | | -1.1 | -0.1 | Rhodanese-like (NCBI) | compare |
| Rru_A0877 | | -1.1 | -3.6 | hypothetical protein (NCBI) | compare |
| Rru_A1018 | | -1.1 | -6.2 | extracellular solute-binding protein, family 1 (NCBI) | compare |
| Rru_A2513 | | -1.1 | -4.9 | Acetyl-CoA hydrolase/transferase (NCBI) | compare |
| Rru_A0643 | | -1.1 | -5.4 | Protein of unknown function DUF152 (NCBI) | compare |
| Rru_A0562 | | -1.1 | -1.6 | Peptidase S1 and S6, chymotrypsin/Hap (NCBI) | compare |
| Rru_A0625 | | -1.1 | -0.3 | hypothetical protein (NCBI) | compare |
| Rru_A1527 | | -1.1 | -2.9 | ABC transporter component (NCBI) | compare |
| Rru_A2115 | | -1.1 | -2.0 | Phosphoglucomutase/phosphomannomutase (NCBI) | compare |
| Rru_A3783 | | -1.1 | -4.2 | tRNA pseudouridine synthase B (NCBI) | compare |
| Rru_A1016 | | -1.1 | -6.8 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A2982 | | -1.1 | -3.2 | O-methyltransferase, family 2 (NCBI) | compare |
| Rru_A1867 | | -1.1 | -0.8 | Protein of unknown function DUF583 (NCBI) | compare |
| Rru_A0117 | | -1.1 | -0.2 | ABC transporter component (NCBI) | compare |
| Rru_A2512 | | -1.1 | -1.0 | 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI) | compare |
| Rru_A1433 | | -1.1 | -3.3 | L-aspartate oxidase (NCBI) | compare |
| Rru_A1200 | | -1.1 | -2.8 | Citrate lyase (NCBI) | compare |
| Rru_B0040 | | -1.1 | -8.7 | Type I secretion membrane fusion protein, HlyD (NCBI) | compare |
| Rru_A1718 | | -1.1 | -8.7 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (NCBI) | compare |
| Rru_A1355 | | -1.1 | -3.9 | Protein of unknown function DUF892 (NCBI) | compare |
| Rru_A1132 | | -1.1 | -3.8 | Anthranilate synthase (NCBI) | compare |
| Rru_A0667 | | -1.1 | -2.5 | Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) | compare |
| Rru_A2874 | | -1.1 | -2.6 | FAD dependent oxidoreductase (NCBI) | compare |
| Rru_A3669 | | -1.0 | -3.8 | Uncharacterized protein UPF0114 (NCBI) | compare |
| Rru_A3532 | | -1.0 | -4.1 | UspA (NCBI) | compare |
| Rru_A3627 | | -1.0 | -3.4 | Cobyrinic acid a,c-diamide synthase (NCBI) | compare |
| Rru_A2723 | | -1.0 | -1.0 | Rubrerythrin (NCBI) | compare |
| Rru_A2713 | | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| Rru_A3253 | | -1.0 | -2.5 | MJ0042 finger-like region (NCBI) | compare |
| Rru_A3482 | | -1.0 | -2.0 | Transcriptional Regulator, MarR family (NCBI) | compare |
| Rru_A2899 | | -1.0 | -4.1 | Transcriptional Regulator, LysR family (NCBI) | compare |
| Rru_A3304 | | -1.0 | -3.3 | ABC transporter component (NCBI) | compare |
| Rru_A1154 | | -1.0 | -4.0 | Protein of unknown function DUF48 (NCBI) | compare |
| Rru_A3089 | | -1.0 | -3.5 | hypothetical protein (NCBI) | compare |
| Rru_A1482 | | -1.0 | -4.7 | Undecaprenyl-phosphategalactosephosphotransferase (NCBI) | compare |
| Rru_A0010 | | -1.0 | -1.5 | Sigma-54 (RpoN) (NCBI) | compare |
| Rru_A1691 | | -1.0 | -4.0 | Spermine synthase (NCBI) | compare |
| Rru_A1347 | | -1.0 | -2.9 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A2987 | | -1.0 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A2411 | | -1.0 | -4.9 | Aminotransferase, class I and II (NCBI) | compare |
| Rru_A3223 | | -1.0 | -1.3 | ABC transporter component (NCBI) | compare |
| Rru_A2197 | | -1.0 | -0.6 | 3,4-Dihydroxy-2-butanone 4-phosphate synthase (NCBI) | compare |
| Rru_A3227 | | -1.0 | -4.0 | conserved hypothetical protein, potential methyltransferase (NCBI) | compare |
| Rru_A3731 | | -1.0 | -4.0 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A1111 | | -1.0 | -4.1 | Pseudouridine synthase, RluD (NCBI) | compare |
| Rru_A1391 | | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| Rru_A0286 | | -1.0 | -3.9 | hypothetical protein (NCBI) | compare |
| Rru_A0477 | | -1.0 | -1.2 | hypothetical protein (NCBI) | compare |
| Rru_A2440 | | -1.0 | -1.6 | NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI) | compare |
| Rru_A3677 | | -1.0 | -2.0 | Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) | compare |
| Rru_A2724 | | -1.0 | -0.3 | Phospholipase/Carboxylesterase (NCBI) | compare |
| Rru_A2136 | | -1.0 | -3.4 | hypothetical protein (NCBI) | compare |
| Rru_A1147 | | -1.0 | -1.5 | Acetylornithine and succinylornithine aminotransferase (NCBI) | compare |
| Rru_A3023 | | -1.0 | -3.4 | hypothetical protein (NCBI) | compare |
| Rru_A0605 | | -1.0 | -2.3 | hypothetical protein (NCBI) | compare |
| Rru_A2939 | | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| Rru_A2244 | | -0.9 | -5.0 | Glycogen/starch/alpha-glucan phosphorylase (NCBI) | compare |
| Rru_A2096 | | -0.9 | -3.7 | Cell divisionFtsK/SpoIIIE (NCBI) | compare |
| Rru_A2198 | | -0.9 | -1.1 | Protein of unknown function UPF0066 (NCBI) | compare |
| Rru_A0159 | | -0.9 | -0.8 | Exodeoxyribonuclease VII (NCBI) | compare |