Experiment set4IT031 for Caulobacter crescentus NA1000

Compare to:

PYE with Dimethyl Sulfoxide 7.5 vol%

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03281 +4.2 35.6 AsnC-family transcriptional regulator compare
CCNA_01712 +3.8 32.8 CopY/TcrY family transcriptional repressor compare
CCNA_00699 +3.7 20.5 LSU ribosomal protein L28P compare
CCNA_03064 +3.6 27.2 PadR-family transcriptional regulator compare
CCNA_02957 +3.6 12.7 ArsR-family transcriptional regulator compare
CCNA_03043 +3.5 11.5 type IV pilin protein pilA compare
CCNA_03287 +3.4 23.6 PadR-family transcriptional regulator compare
CCNA_02103 +3.4 17.0 hypothetical protein compare
CCNA_01060 +3.4 15.3 type I protein secretion ATP-binding protein RsaD compare
CCNA_03252 +3.3 22.3 CopY/TcrY-family transcriptional regulator compare
CCNA_02026 +3.3 17.1 hypothetical protein compare
CCNA_00161 +3.3 25.9 hypothetical protein compare
CCNA_02028 +3.3 5.5 NTF2 superfamily protein compare
CCNA_02030 +3.3 12.6 hypothetical protein compare
CCNA_02980 +3.3 22.9 tryptophan 2,3-dioxygenase compare
CCNA_01242 +3.2 20.3 amino acid permease compare
CCNA_01739 +3.2 16.6 LSU ribosomal protein L9P compare
CCNA_00846 +3.2 26.8 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_02025 +3.2 12.8 hypothetical protein compare
CCNA_01361 +3.2 13.0 PepSY superfamily protein compare
CCNA_00924 +3.2 17.8 MarR/EmrR family transcriptional regulator compare
CCNA_00162 +3.2 16.5 hypothetical protein compare
CCNA_01059 +3.1 24.7 S-layer protein rsaA compare
CCNA_00518 +3.1 19.2 LSU ribosomal protein L25P compare
CCNA_R0037 +3.1 15.2 tRNA-Glu compare
CCNA_01061 +3.1 10.9 type I secretion adaptor protein RsaE compare
CCNA_01751 +3.1 10.7 aminodeoxychorismate lyase compare
CCNA_01058 +3.1 19.0 helix-turn-helix transcriptional regulator compare
CCNA_03271 +3.1 24.1 methionine gamma-lyase compare
CCNA_02000 +3.1 5.2 SSU ribosomal protein S2P compare
CCNA_00962 +3.1 20.0 MarR-family transcriptional regulator compare
CCNA_03280 +3.1 26.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_03379 +3.0 9.5 Cro/CI family transcriptional regulator compare
CCNA_03479 +3.0 19.7 MarR-family transcriptional regulator compare
CCNA_01815 +3.0 20.1 nitrogen assimilation regulatory protein NtrC compare
CCNA_03989 +3.0 25.1 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03289 +3.0 10.1 HicB-family RNA-binding protein compare
CCNA_01583 +3.0 7.6 phosphate-binding protein compare
CCNA_01790 +2.9 10.9 protein translocase subunit secG compare
CCNA_02910 +2.9 24.9 TonB-dependent receptor compare
CCNA_00028 +2.9 12.6 TonB-dependent receptor compare
CCNA_03072 +2.9 12.7 TetR-family transcriptional regulator compare
CCNA_01814 +2.9 21.0 nitrogen regulation protein ntrB compare
CCNA_02328 +2.9 2.8 cell cycle regulatory protein GcrA compare
CCNA_01094 +2.9 8.9 hypothetical protein compare
CCNA_00756 +2.9 6.2 hypothetical protein compare
CCNA_03612 +2.8 19.7 HTH XRE-family transcriptional regulator compare
CCNA_02225 +2.8 14.4 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_03325 +2.8 13.4 hypothetical protein compare
CCNA_03689 +2.8 19.9 alanine dehydrogenase compare
CCNA_01840 +2.8 21.9 MerR-family transcriptional regulator compare
CCNA_01526 +2.8 13.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_02419 +2.8 10.3 TonB1 protein compare
CCNA_01684 +2.8 18.0 phenylalanine-4-hydroxylase compare
CCNA_02021 +2.7 12.1 hypothetical protein compare
CCNA_03012 +2.7 15.4 peroxiredoxin compare
CCNA_03129 +2.7 17.1 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_01573 +2.7 13.6 ArsR-family transcriptional regulator compare
CCNA_02447 +2.7 13.6 PspA/IM30 family regulatory protein compare
CCNA_02133 +2.7 14.2 glucokinase compare
CCNA_02448 +2.7 13.4 hypothetical protein compare
CCNA_03961 +2.7 14.0 hypothetical protein compare
CCNA_03062 +2.7 16.0 cell wall hydrolase family protein compare
CCNA_02339 +2.7 15.8 methyltransferase compare
CCNA_00939 +2.7 10.6 MarR-family transcriptional regulator compare
CCNA_02575 +2.6 10.0 hypothetical protein compare
CCNA_03030 +2.6 15.5 cytochrome c2 compare
CCNA_02289 +2.6 21.0 MarR/EmrR family transcriptional regulator compare
CCNA_02617 +2.6 21.1 histidinol-phosphate aminotransferase compare
CCNA_03108 +2.6 21.0 TonB-dependent outer membrane receptor compare
CCNA_01942 +2.6 15.7 Rrf2 family protein compare
CCNA_00769 +2.6 12.4 TetR family transcriptional regulator compare
CCNA_00505 +2.6 14.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_03805 +2.6 18.7 PadR-family transcriptional regulator compare
CCNA_03123 +2.6 13.4 ArsR-family transcriptional regulator compare
CCNA_02316 +2.6 13.7 hypothetical protein compare
CCNA_02646 +2.6 5.2 cell division protein MraZ compare
CCNA_01851 +2.6 21.0 quinol cytochrome oxidase polypeptide II compare
CCNA_01453 +2.6 12.0 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02591 +2.5 11.7 glutaredoxin compare
CCNA_01186 +2.5 13.1 hypothetical protein compare
CCNA_03513 +2.5 11.9 cytochrome c oxidase subunit III coxC compare
CCNA_02616 +2.5 19.8 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01931 +2.5 19.2 TetR-family transcriptional regulator compare
CCNA_01324 +2.5 10.4 LSU ribosomal protein L30P compare
CCNA_01525 +2.5 15.5 flagellar biosynthesis repressor flbT compare
CCNA_01913 +2.5 16.1 MarR-family transcriptional regulator compare
CCNA_00920 +2.5 9.1 hypothetical protein compare
CCNA_00032 +2.4 11.5 antitoxin protein VapB compare
CCNA_01801 +2.4 12.7 hypothetical protein compare
CCNA_01763 +2.4 14.5 multifunctional aminopeptidase compare
CCNA_00354 +2.4 12.8 NlpC/P60 CHAP domain amidase protein compare
CCNA_01780 +2.4 16.9 exopolyphosphatase compare
CCNA_01063 +2.4 11.5 UDP-perosamine 4-acetyl transferase compare
CCNA_02315 +2.4 8.7 Cro/CI-family transcriptional regulator compare
CCNA_02416 +2.4 14.1 DNA-binding protein HU compare
CCNA_02073 +2.4 8.4 cupin domain transcriptional regulator compare
CCNA_03635 +2.4 2.7 hypothetical protein compare
CCNA_01742 +2.4 14.9 hypothetical protein compare
CCNA_01181 +2.4 11.0 hypothetical protein compare
CCNA_03498 +2.3 17.9 MarR-family transcriptional regulator compare
CCNA_03951 +2.3 8.7 hypothetical protein compare
CCNA_00264 +2.3 14.3 C4-dicarboxylate transport protein compare
CCNA_03519 +2.3 10.3 PadR-family transcriptional regulator compare
CCNA_00497 +2.3 14.9 putative rhamnosyl transferase compare
CCNA_01849 +2.3 16.8 quinol cytochrome oxidase polypeptide III compare
CCNA_02760 +2.3 8.5 hypothetical protein compare
CCNA_01804 +2.3 14.2 glutathione peroxidase compare
CCNA_01008 +2.3 17.7 urocanate hydratase compare
CCNA_03863 +2.3 7.5 hypothetical protein compare
CCNA_02732 +2.3 4.0 hypothetical protein compare
CCNA_01505 +2.3 7.5 hypothetical protein compare
CCNA_02242 +2.3 11.6 PHB granule-associated protein, phasin2 compare
CCNA_00441 +2.3 14.4 chemotaxis receiver domain protein cheYI compare
CCNA_02075 +2.3 2.7 peptidoglycan binding endopeptidase DipM compare
CCNA_03215 +2.3 14.9 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00459 +2.3 14.2 Na+/H+ antiporter nhaA compare
CCNA_00944 +2.3 12.8 flagellar hook length determination protein compare
CCNA_03420 +2.3 11.0 hypothetical protein compare
CCNA_03518 +2.3 17.3 cytochrome c oxidase polypeptide II coxB compare
CCNA_01848 +2.3 16.8 quinol cytochrome oxidase polypeptide IV compare
CCNA_03372 +2.3 9.5 bacterioferritin-associated ferredoxin compare
CCNA_01802 +2.3 6.9 hypothetical protein compare
CCNA_01690 +2.2 6.9 MAPEG family membrane protein compare
CCNA_00834 +2.2 10.6 flagellin FljM compare
CCNA_02619 +2.2 15.4 stomatin/prohibitin-related protein compare
CCNA_01678 +2.2 10.6 arginine N-succinyltransferase, beta chain compare
CCNA_00296 +2.2 12.2 phosphate regulon response regulator PhoB compare
CCNA_00031 +2.2 13.5 toxin protein VapC compare
CCNA_01393 +2.2 14.7 soluble lytic murein transglycosylase compare
CCNA_00027 +2.2 4.2 2OG-Fe(II) oxygenase compare
CCNA_00292 +2.2 7.2 phosphate transport system permease protein pstC compare
CCNA_03089 +2.2 13.8 hypothetical protein compare
CCNA_00210 +2.2 18.4 TonB-dependent receptor compare
CCNA_01619 +2.2 11.0 NYN domain protein compare
CCNA_00163 +2.2 14.3 exopolysaccharide transport family protein compare
CCNA_02576 +2.2 15.0 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03938 +2.1 6.4 hypothetical protein compare
CCNA_00726 +2.1 16.1 acyl-CoA dehydrogenase compare
CCNA_01553 +2.1 10.7 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_02379 +2.1 12.5 hypothetical protein compare
CCNA_02976 +2.1 11.1 MCP-signal associated domain protein compare
CCNA_00168 +2.1 16.7 polysaccharide export protein compare
CCNA_00895 +2.1 12.2 hypothetical protein compare
CCNA_03464 +2.1 7.7 glycine cleavage system H protein compare
CCNA_01593 +2.1 13.3 Xaa-pro aminopeptidase compare
CCNA_03609 +2.1 12.6 outer membrane protein compare
CCNA_03936 +2.1 9.7 hypothetical protein compare
CCNA_00998 +2.1 10.8 ROS/MUCR transcriptional regulator compare
CCNA_01235 +2.1 10.3 AcrR-family transcriptional regulator compare
CCNA_01679 +2.1 12.9 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01528 +2.1 12.4 flagellin fljK compare
CCNA_02287 +2.1 14.1 TetR-family transcriptional regulator compare
CCNA_00803 +2.1 8.3 chemotaxis protein cheW compare
CCNA_01655 +2.1 11.3 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03391 +2.1 12.3 Cro/CI family transcriptional regulator compare
CCNA_00447 +2.1 11.1 chemotaxis protein cheD compare
CCNA_00947 +2.1 16.5 flagellar hook protein FlgE compare
CCNA_00954 +2.1 15.8 AAA-family response regulator flbD compare
CCNA_02081 +2.1 10.1 Sec-independent protein translocase protein tatB compare
CCNA_02156 +2.0 14.0 hypothetical protein compare
CCNA_01968 +2.0 6.0 pentapeptide repeats containing protein compare
CCNA_02552 +2.0 6.0 ATP-dependent Clp protease adaptor protein ClpS compare
CCNA_02663 +2.0 4.6 DnaK suppressor protein DksA compare
CCNA_01603 +2.0 11.0 aspartate aminotransferase compare
CCNA_00375 +2.0 9.3 hypothetical protein compare
CCNA_01722 +2.0 7.2 hypothetical protein compare
CCNA_02475 +2.0 15.0 transcriptional regulator vanR compare
CCNA_01020 +2.0 12.2 LacI-family transcriptional regulator compare
CCNA_03622 +2.0 12.0 beta-lactamase repressor compare
CCNA_01850 +2.0 15.7 quinol cytochrome oxidase polypeptide I compare
CCNA_02805 +2.0 11.9 hypothetical protein compare
CCNA_01541 +2.0 14.4 LysR-family transcriptional regulator compare
CCNA_00079 +2.0 7.9 MerR-family transcriptional regulator compare
CCNA_00400 +2.0 12.0 MarR/EmrR-family transcriptional regulator compare
CCNA_03643 +2.0 3.2 succinate dehydrogenase membrane anchor subunit compare
CCNA_03688 +2.0 11.9 AsnC-family transcriptional regulator compare
CCNA_00013 +2.0 16.9 protein-PII uridylyltransferase compare
CCNA_02341 +2.0 9.8 small heat shock protein compare
CCNA_00945 +2.0 10.7 chemotaxis protein MotD compare
CCNA_03808 +2.0 12.6 organic solvent resistance transport system Ttg2C protein compare
CCNA_03515 +2.0 6.8 hypothetical protein compare
CCNA_02171 +2.0 13.6 nucleoside permease nupC compare
CCNA_02324 +2.0 11.5 heat shock protein 33 hsp33 compare
CCNA_01199 +2.0 12.6 glucose-1-phosphate thymidylyltransferase compare
CCNA_01220 +2.0 9.8 7-keto-8-aminopelargonate synthetase compare
CCNA_01624 +2.0 5.2 orotate phosphoribosyltransferase compare
CCNA_01193 +2.0 15.3 amylosucrase compare
CCNA_01959 +2.0 3.5 3-dehydroquinate dehydratase compare
CCNA_00807 +2.0 5.2 ribonuclease P protein component compare
CCNA_01964 +1.9 6.9 NADH dehydrogenase compare
CCNA_01691 +1.9 9.1 tRNA/rRNA methyltransferase compare
CCNA_00352 +1.9 11.3 integral membrane protein compare
CCNA_02434 +1.9 9.2 hypothetical protein compare
CCNA_00215 +1.9 10.8 SapC surface layer protein compare
CCNA_01339 +1.9 7.4 ArsR-family transcriptional regulator compare
CCNA_02330 +1.9 10.7 hypothetical protein compare
CCNA_00207 +1.9 12.0 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01926 +1.9 8.4 GGDEF diguanylate cyclase DgcB compare
CCNA_R0054 +1.9 4.2 tRNA-Gly compare


Specific Phenotypes

For 1 genes in this experiment

For stress Dimethyl Sulfoxide in Caulobacter crescentus NA1000

For stress Dimethyl Sulfoxide across organisms