Experiment set4IT030 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate and vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03340 +1.1 1.5 ABC transporter ATP-binding protein compare
MMP_RS07890 +1.0 2.8 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05835 +0.9 1.1 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01650 +0.9 1.4 sulfurtransferase TusA family protein compare
MMP_RS07840 +0.9 3.5 ribonuclease III compare
MMP_RS02605 +0.9 1.1 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS02175 +0.8 1.0 DUF1611 domain-containing protein compare
MMP_RS02815 +0.8 2.9 hypothetical protein compare
MMP_RS06540 +0.8 2.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS09025 +0.7 1.0 hypothetical protein compare
MMP_RS08670 +0.7 2.5 metallophosphoesterase compare
MMP_RS01470 +0.6 2.4 ATP-binding cassette domain-containing protein compare
MMP_RS01620 +0.6 1.2 hypothetical protein compare
MMP_RS06495 +0.6 1.7 YkgJ family cysteine cluster protein compare
MMP_RS06585 +0.6 1.4 DMT family protein compare
MMP_RS07835 +0.6 2.0 TldD/PmbA family protein compare
MMP_RS01075 +0.6 0.6 hypothetical protein compare
MMP_RS06325 +0.6 1.2 hypothetical protein compare
MMP_RS07770 +0.6 1.7 alanine racemase compare
MMP_RS08310 +0.6 1.5 TMEM165/GDT1 family protein compare
MMP_RS02985 +0.6 1.1 hypothetical protein compare
MMP_RS05665 +0.6 2.2 phosphate ABC transporter permease subunit PstC compare
MMP_RS01095 +0.5 1.6 iron ABC transporter permease compare
MMP_RS02310 +0.5 1.2 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS09035 +0.5 1.6 hypothetical protein compare
MMP_RS02965 +0.5 1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS08285 +0.5 3.2 serine/threonine protein kinase compare
MMP_RS08430 +0.5 2.1 HAD family hydrolase compare
MMP_RS08315 +0.5 1.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08215 +0.5 1.6 DUF483 domain-containing protein compare
MMP_RS00565 +0.5 1.6 CBS domain-containing protein compare
MMP_RS07650 +0.5 3.1 TldD/PmbA family protein compare
MMP_RS06155 +0.5 1.2 DUF4186 domain-containing protein compare
MMP_RS01570 +0.5 1.0 hypothetical protein compare
MMP_RS08130 +0.5 2.8 IGHMBP2 family helicase compare
MMP_RS06990 +0.4 1.7 CatB-related O-acetyltransferase compare
MMP_RS08380 +0.4 2.9 phosphatase PAP2 family protein compare
MMP_RS04030 +0.4 2.2 hypothetical protein compare
MMP_RS04145 +0.4 1.0 hypothetical protein compare
MMP_RS07800 +0.4 1.8 ATP-binding cassette domain-containing protein compare
MMP_RS08930 +0.4 1.0 hypothetical protein compare
MMP_RS02415 +0.4 1.0 site-specific integrase compare
MMP_RS00105 +0.4 2.3 hypothetical protein compare
MMP_RS02290 +0.4 2.6 MBL fold metallo-hydrolase compare
MMP_RS01420 +0.4 1.1 hypothetical protein compare
MMP_RS07765 +0.4 2.1 sodium:alanine symporter family protein compare
MMP_RS01370 +0.4 2.5 acetate--CoA ligase family protein compare
MMP_RS00395 +0.4 0.9 MGMT family protein compare
MMP_RS00945 +0.4 0.7 PadR family transcriptional regulator compare
MMP_RS00705 +0.4 0.8 hypothetical protein compare
MMP_RS00630 +0.4 1.8 ECF transporter S component compare
MMP_RS08245 +0.4 1.7 DUF4013 domain-containing protein compare
MMP_RS07125 +0.4 1.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08205 +0.4 2.6 stage II sporulation protein M compare
MMP_RS08275 +0.4 2.4 hypothetical protein compare
MMP_RS06575 +0.4 1.4 fluoride efflux transporter CrcB compare
MMP_RS06915 +0.4 0.9 metallophosphoesterase compare
MMP_RS02410 +0.4 1.2 ABC transporter substrate-binding protein compare
MMP_RS07910 +0.4 1.6 NAD(P)H-hydrate dehydratase compare
MMP_RS05170 +0.4 1.8 lysine exporter LysO family protein compare
MMP_RS01100 +0.4 0.6 ABC transporter ATP-binding protein compare
MMP_RS00185 +0.4 2.5 potassium channel protein compare
MMP_RS00660 +0.4 2.2 alkaline phosphatase family protein compare
MMP_RS06140 +0.4 0.8 radical SAM protein compare
MMP_RS08980 +0.4 1.4 hypothetical protein compare
MMP_RS03965 +0.4 1.1 hypothetical protein compare
MMP_RS03670 +0.4 1.2 DUF1890 domain-containing protein compare
MMP_RS00700 +0.4 1.5 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05235 +0.4 2.0 exodeoxyribonuclease III compare
MMP_RS01090 +0.4 2.1 ABC transporter substrate-binding protein compare
MMP_RS03520 +0.4 0.9 YwbE family protein compare
MMP_RS00545 +0.4 1.6 XRE family transcriptional regulator compare
MMP_RS08555 +0.4 1.5 hypothetical protein compare
MMP_RS06875 +0.4 1.9 FAD-dependent oxidoreductase compare
MMP_RS07150 +0.3 2.1 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08410 +0.3 1.7 DUF169 domain-containing protein compare
MMP_RS00905 +0.3 1.4 phenylacetate--CoA ligase compare
MMP_RS08085 +0.3 2.1 hypothetical protein compare
MMP_RS09030 +0.3 1.3 hypothetical protein compare
MMP_RS03465 +0.3 0.5 adenine phosphoribosyltransferase compare
MMP_RS03585 +0.3 1.4 Hsp20/alpha crystallin family protein compare
MMP_RS01685 +0.3 1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS02170 +0.3 1.4 CBS domain-containing protein compare
MMP_RS01455 +0.3 1.4 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS01775 +0.3 0.5 TIGR00297 family protein compare
MMP_RS08325 +0.3 2.1 hypothetical protein compare
MMP_RS08230 +0.3 1.6 50S ribosomal protein L11 methyltransferase compare
MMP_RS08850 +0.3 2.4 hypothetical protein compare
MMP_RS07855 +0.3 1.7 class I SAM-dependent methyltransferase compare
MMP_RS08625 +0.3 2.2 type II/IV secretion system ATPase subunit compare
MMP_RS08455 +0.3 1.3 multiprotein bridging factor aMBF1 compare
MMP_RS03300 +0.3 0.4 TOBE domain-containing protein compare
MMP_RS02500 +0.3 1.1 minichromosome maintenance protein MCM compare
MMP_RS00145 +0.3 1.6 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS00380 +0.3 1.3 P-II family nitrogen regulator compare
MMP_RS05505 +0.3 1.4 class IV adenylate cyclase compare
MMP_RS02720 +0.3 1.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS08475 +0.3 1.6 ABC transporter permease compare
MMP_RS01060 +0.3 1.9 calcium/sodium antiporter compare
MMP_RS00080 +0.3 1.3 RecB-family nuclease compare
MMP_RS07145 +0.3 1.1 AmmeMemoRadiSam system protein B compare
MMP_RS02370 +0.3 1.2 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS04960 +0.3 1.7 cytochrome c biogenesis CcdA family protein compare
MMP_RS02495 +0.3 0.8 hypothetical protein compare
MMP_RS01125 +0.3 1.2 thioredoxin family protein compare
MMP_RS09065 +0.3 2.1 hypothetical protein compare
MMP_RS03220 +0.3 0.9 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS03215 +0.3 1.9 MBL fold metallo-hydrolase compare
MMP_RS04270 +0.3 1.1 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08250 +0.3 1.9 pyruvate kinase compare
MMP_RS06545 +0.3 1.2 ferredoxin family protein compare
MMP_RS02360 +0.3 1.6 hypothetical protein compare
MMP_RS02710 +0.3 1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01515 +0.3 1.8 PINc/VapC family ATPase compare
MMP_RS01780 +0.3 1.2 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS07900 +0.3 0.8 YeeE/YedE family protein compare
MMP_RS06460 +0.3 1.4 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS08390 +0.3 1.2 DUF5400 domain-containing protein compare
MMP_RS08405 +0.3 1.9 MFS transporter compare
MMP_RS00825 +0.3 1.2 fumarylacetoacetate hydrolase family protein compare
MMP_RS06655 +0.3 1.8 glycoside hydrolase family 15 protein compare
MMP_RS08640 +0.3 1.6 TIM barrel protein compare
MMP_RS02575 +0.3 1.3 CAAX prenyl protease Rce1 compare
MMP_RS06275 +0.3 1.4 ATP-dependent DNA helicase compare
MMP_RS06735 +0.3 1.2 class I SAM-dependent rRNA methyltransferase compare
MMP_RS01150 +0.3 1.0 aldo/keto reductase compare
MMP_RS01010 +0.3 1.6 DUF4352 domain-containing protein compare
MMP_RS08570 +0.3 1.8 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06910 +0.3 1.3 RlmF-related methyltransferase compare
MMP_RS03150 +0.3 2.0 phosphoglycerate mutase compare
MMP_RS00650 +0.3 1.3 ABC transporter ATP-binding protein compare
MMP_RS08160 +0.3 1.2 EamA family transporter compare
MMP_RS08485 +0.3 1.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS05980 +0.2 1.3 ferritin compare
MMP_RS02675 +0.2 0.7 hypothetical protein compare
MMP_RS01055 +0.2 1.1 hypothetical protein compare
MMP_RS04815 +0.2 1.2 chemotaxis protein CheD compare
MMP_RS02895 +0.2 1.1 DHH family phosphoesterase compare
MMP_RS03890 +0.2 1.2 DUF2540 domain-containing protein compare
MMP_RS02840 +0.2 1.0 DUF123 domain-containing protein compare
MMP_RS07970 +0.2 0.9 hypothetical protein compare
MMP_RS07185 +0.2 1.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS02915 +0.2 1.1 amino acid ABC transporter permease compare
MMP_RS05940 +0.2 0.7 corrinoid protein compare
MMP_RS04835 +0.2 1.6 chemotaxis protein CheC compare
MMP_RS02825 +0.2 1.3 mechanosensitive ion channel family protein compare
MMP_RS00375 +0.2 1.4 ammonium transporter compare
MMP_RS02375 +0.2 1.8 hypothetical protein compare
MMP_RS04415 +0.2 1.2 peptide-methionine (S)-S-oxide reductase MsrA compare
MMP_RS05695 +0.2 1.4 phospholipase D-like domain-containing protein compare
MMP_RS04520 +0.2 1.0 nucleoside deaminase compare
MMP_RS01485 +0.2 1.4 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS06365 +0.2 0.7 hypothetical protein compare
MMP_RS03740 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS03980 +0.2 1.2 hypothetical protein compare
MMP_RS06515 +0.2 0.8 UPF0489 family protein compare
MMP_RS01525 +0.2 0.5 nucleoside-diphosphate kinase compare
MMP_RS00055 +0.2 1.6 DUF2254 domain-containing protein compare
MMP_RS06080 +0.2 1.5 radical SAM protein compare
MMP_RS01135 +0.2 1.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS06225 +0.2 1.4 DNA double-strand break repair nuclease NurA compare
MMP_RS00400 +0.2 1.5 tributyrin esterase compare
MMP_RS01785 +0.2 1.6 hypothetical protein compare
MMP_RS07595 +0.2 1.4 hypothetical protein compare
MMP_RS00035 +0.2 1.5 DUF2098 family protein compare
MMP_RS01120 +0.2 1.1 permease compare
MMP_RS08775 +0.2 0.7 methanogenesis marker 9 domain-containing protein compare
MMP_RS08770 +0.2 1.2 hypothetical protein compare
MMP_RS05945 +0.2 0.9 CBS domain-containing protein compare
MMP_RS08260 +0.2 1.0 DUF99 family protein compare
MMP_RS02810 +0.2 1.4 hypothetical protein compare
MMP_RS07155 +0.2 1.5 MFS transporter compare
MMP_RS06045 +0.2 1.4 DNA polymerase compare
MMP_RS02320 +0.2 1.1 glutamate-cysteine ligase family protein compare
MMP_RS01680 +0.2 1.3 phenylacetate--CoA ligase compare
MMP_RS08400 +0.2 0.5 MJ0307 family thioredoxin compare
MMP_RS02590 +0.2 1.2 low molecular weight phosphatase family protein compare
MMP_RS01240 +0.2 0.3 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS00280 +0.2 1.3 DUF2118 domain-containing protein compare
MMP_RS06070 +0.2 1.7 iron ABC transporter substrate-binding protein compare
MMP_RS01115 +0.2 1.6 molybdopterin molybdotransferase MoeA compare
MMP_RS06000 +0.2 0.9 divalent-cation tolerance protein CutA compare
MMP_RS06675 +0.2 1.3 ADP-specific phosphofructokinase compare
MMP_RS02315 +0.2 0.9 RimK family alpha-L-glutamate ligase compare
MMP_RS00955 +0.2 1.3 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS05455 +0.2 0.8 DUF167 domain-containing protein compare
MMP_RS00795 +0.2 1.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00640 +0.2 1.1 ABC transporter substrate-binding protein compare
MMP_RS01855 +0.2 1.2 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS00480 +0.2 1.4 hypothetical protein compare
MMP_RS04105 +0.2 0.8 MarR family transcriptional regulator compare
MMP_RS01160 +0.2 1.0 DMT family transporter compare
MMP_RS02085 +0.2 1.0 inosine/xanthosine triphosphatase compare
MMP_RS06745 +0.2 0.9 DUF2119 domain-containing protein compare
MMP_RS02740 +0.2 0.9 hypothetical protein compare
MMP_RS00290 +0.2 1.3 hypothetical protein compare
MMP_RS06055 +0.2 0.9 peroxiredoxin compare
MMP_RS01835 +0.2 1.1 hypothetical protein compare
MMP_RS08755 +0.2 1.2 sodium:solute symporter family protein compare
MMP_RS00235 +0.2 1.1 HDIG domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 casamino acids across organisms