Experiment set4IT030 for Methanococcus maripaludis JJ

Compare to:

Iron limitation (0.2x), H2 media

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00600 -5.6 -3.9 hydroxymethylbilane synthase compare
MMJJ_RS05450 -5.5 -19.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS05935 -5.4 -3.7 Era-like GTP-binding protein compare
MMJJ_RS00275 -5.3 -3.7 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03615 -5.3 -3.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS00270 -5.2 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS06625 -5.2 -3.2 pyruvate synthase subunit PorB compare
MMJJ_RS05995 -5.0 -3.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS05650 -4.6 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS00570 -4.6 -3.0 ribonuclease P compare
MMJJ_RS04485 -4.6 -12.1 riboflavin synthase compare
MMJJ_RS06485 -4.5 -3.1 phosphoglycerate kinase compare
MMJJ_RS06695 -4.5 -4.4 amidohydrolase compare
MMJJ_RS03840 -4.5 -3.1 DHH family phosphoesterase compare
MMJJ_RS03895 -4.5 -5.7 hydrogenase expression/formation protein HypE compare
MMJJ_RS06040 -4.5 -5.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS01750 -4.4 -4.2 ferrous iron transport protein A compare
MMJJ_RS02920 -4.4 -3.2 30S ribosomal protein S27ae compare
MMJJ_RS05930 -4.3 -3.0 cell division protein SepF compare
MMJJ_RS06860 -4.2 -6.3 hypothetical protein compare
MMJJ_RS02275 -4.1 -6.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03815 -4.1 -3.2 nascent polypeptide-associated complex protein compare
MMJJ_RS06175 -4.1 -3.8 DUF1743 domain-containing protein compare
MMJJ_RS09175 -4.1 -1.8 anthranilate synthase component I compare
MMJJ_RS00355 -4.1 -3.9 ribonuclease P protein component 4 compare
MMJJ_RS01935 -4.0 -6.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS08625 -4.0 -7.6 magnesium/cobalt transporter CorA compare
MMJJ_RS06180 -4.0 -3.8 tryptophan--tRNA ligase compare
MMJJ_RS07950 -4.0 -4.6 4Fe-4S binding protein compare
MMJJ_RS06725 -3.9 -15.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS03055 -3.9 -4.9 hypothetical protein compare
MMJJ_RS02200 -3.9 -13.0 chorismate pyruvate-lyase family protein compare
MMJJ_RS03830 -3.9 -13.3 CBS domain-containing protein compare
MMJJ_RS01870 -3.9 -3.1 methanogenesis marker 15 protein compare
MMJJ_RS03670 -3.8 -6.7 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS00560 -3.8 -5.7 homoisocitrate dehydrogenase compare
MMJJ_RS03660 -3.8 -5.7 DUF447 family protein compare
MMJJ_RS07190 -3.8 -4.4 RtcB family protein compare
MMJJ_RS06805 -3.7 -4.4 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS00235 -3.7 -18.3 hypothetical protein compare
MMJJ_RS04475 -3.7 -5.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS05225 -3.7 -1.5 Gar1/Naf1 family protein compare
MMJJ_RS00195 -3.7 -5.0 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS01360 -3.7 -3.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08020 -3.7 -10.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03125 -3.7 -6.0 GMC oxidoreductase compare
MMJJ_RS04800 -3.6 -8.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS04790 -3.6 -5.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04970 -3.6 -2.9 DUF655 domain-containing protein compare
MMJJ_RS00450 -3.6 -2.9 DUF126 domain-containing protein compare
MMJJ_RS01600 -3.6 -4.6 radical SAM protein compare
MMJJ_RS06215 -3.6 -5.8 agmatinase compare
MMJJ_RS04200 -3.6 -4.6 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03785 -3.5 -3.4 hypothetical protein compare
MMJJ_RS06250 -3.5 -3.4 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS03580 -3.5 -5.3 TIGR00303 family protein compare
MMJJ_RS05445 -3.5 -3.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS00645 -3.5 -15.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS00125 -3.5 -3.3 KEOPS complex subunit Cgi121 compare
MMJJ_RS03270 -3.4 -3.1 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05620 -3.4 -5.2 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS05950 -3.4 -4.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03820 -3.4 -5.6 hydrogenase formation protein HypD compare
MMJJ_RS04995 -3.4 -7.4 Tfx family DNA-binding protein compare
MMJJ_RS04520 -3.3 -6.3 coenzyme F430 synthase compare
MMJJ_RS05810 -3.3 -7.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS08095 -3.3 -6.2 cobyric acid synthase CobQ compare
MMJJ_RS03110 -3.3 -5.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04155 -3.3 -9.9 hypothetical protein compare
MMJJ_RS08080 -3.3 -11.0 TIGR00300 family protein compare
MMJJ_RS04675 -3.2 -8.7 thiamine pyrophosphate-binding protein compare
MMJJ_RS06750 -3.2 -3.0 homoaconitase large subunit compare
MMJJ_RS05070 -3.2 -3.4 DNA primase catalytic subunit PriS compare
MMJJ_RS01810 -3.2 -2.4 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS03760 -3.2 -5.4 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS03200 -3.2 -3.4 uroporphyrinogen-III synthase compare
MMJJ_RS07785 -3.2 -3.9 fumarate reductase subunit A compare
MMJJ_RS06875 -3.2 -3.6 hypothetical protein compare
MMJJ_RS06490 -3.1 -3.8 methanogenesis marker 2 protein compare
MMJJ_RS00205 -3.1 -6.7 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS02090 -3.1 -5.1 tyramine--L-glutamate ligase compare
MMJJ_RS05065 -3.1 -6.1 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS08855 -3.1 -5.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS06270 -3.1 -10.2 dethiobiotin synthase compare
MMJJ_RS06880 -3.1 -2.5 EhaG family protein compare
MMJJ_RS00370 -3.1 -2.4 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06110 -3.1 -3.4 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS08850 -3.1 -3.5 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS08035 -3.0 -9.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS05655 -3.0 -6.6 HisA/HisF family protein compare
MMJJ_RS08055 -3.0 -7.7 methanogenesis marker 14 protein compare
MMJJ_RS08535 -3.0 -5.2 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06155 -3.0 -5.1 phosphatidylglycerophosphatase A compare
MMJJ_RS03005 -3.0 -5.2 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS02055 -3.0 -15.5 GTP 3',8-cyclase MoaA compare
MMJJ_RS06600 -3.0 -3.3 DUF555 domain-containing protein compare
MMJJ_RS01355 -3.0 -4.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS06840 -3.0 -5.5 nickel-dependent hydrogenase large subunit compare
MMJJ_RS09375 -2.9 -2.3 hypothetical protein compare
MMJJ_RS05590 -2.9 -2.8 homoserine dehydrogenase compare
MMJJ_RS07980 -2.9 -11.8 biotin synthase BioB compare
MMJJ_RS05720 -2.9 -3.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS07000 -2.9 -2.6 TrkH family potassium uptake protein compare
MMJJ_RS08575 -2.9 -5.0 hypothetical protein compare
MMJJ_RS08660 -2.8 -4.6 acetylornithine transaminase compare
MMJJ_RS01865 -2.8 -8.1 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS07410 -2.8 -5.5 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS05610 -2.8 -5.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03065 -2.8 -12.9 CBS domain-containing protein compare
MMJJ_RS09190 -2.8 -2.8 tryptophan synthase subunit beta compare
MMJJ_RS08250 -2.8 -7.4 hydrogenase maturation peptidase HycI compare
MMJJ_RS09135 -2.8 -10.4 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS07995 -2.8 -5.6 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS07720 -2.8 -2.6 UPF0058 family protein compare
MMJJ_RS08000 -2.8 -9.5 HesA/MoeB/ThiF family protein compare
MMJJ_RS03060 -2.8 -3.9 methanogenesis marker 7 protein compare
MMJJ_RS03875 -2.8 -6.2 CBS domain-containing protein compare
MMJJ_RS06240 -2.8 -3.8 dihydropteroate synthase-like protein compare
MMJJ_RS06170 -2.8 -10.3 hypothetical protein compare
MMJJ_RS03800 -2.7 -11.7 aldolase compare
MMJJ_RS03295 -2.7 -18.2 PHP domain-containing protein compare
MMJJ_RS01755 -2.7 -3.6 ferrous iron transport protein B compare
MMJJ_RS04730 -2.7 -3.3 tyrosine decarboxylase MfnA compare
MMJJ_RS06390 -2.7 -2.2 NADPH-dependent F420 reductase compare
MMJJ_RS05770 -2.7 -3.1 flagellar protein D compare
MMJJ_RS06225 -2.7 -2.3 adenosylmethionine decarboxylase compare
MMJJ_RS04685 -2.7 -11.1 carbamoyltransferase HypF compare
MMJJ_RS03170 -2.7 -6.7 DUF5612 domain-containing protein compare
MMJJ_RS05295 -2.7 -11.6 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS07725 -2.6 -6.5 DNA primase DnaG compare
MMJJ_RS03225 -2.6 -3.6 4Fe-4S binding protein compare
MMJJ_RS05575 -2.6 -5.6 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04145 -2.6 -10.7 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS08840 -2.6 -3.3 calcium/sodium antiporter compare
MMJJ_RS06375 -2.6 -3.2 UbiX family flavin prenyltransferase compare
MMJJ_RS06185 -2.6 -5.5 cobalamin biosynthesis protein compare
MMJJ_RS05330 -2.6 -3.4 DNA polymerase II large subunit compare
MMJJ_RS01880 -2.6 -3.2 RlmE family RNA methyltransferase compare
MMJJ_RS08320 -2.6 -2.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07265 -2.6 -10.6 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS05380 -2.6 -1.8 hypothetical protein compare
MMJJ_RS01875 -2.6 -7.4 global nitrogen regulator NrpR compare
MMJJ_RS06220 -2.6 -5.9 polyamine aminopropyltransferase compare
MMJJ_RS01830 -2.6 -4.7 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS00210 -2.5 -3.0 DUF530 family protein compare
MMJJ_RS06700 -2.5 -5.3 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS06910 -2.5 -3.9 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS03150 -2.5 -6.3 2-phospho-L-lactate transferase compare
MMJJ_RS07380 -2.5 -6.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS01350 -2.5 -8.1 sodium:proton antiporter compare
MMJJ_RS01200 -2.5 -3.6 PRC-barrel domain-containing protein compare
MMJJ_RS04615 -2.4 -3.8 methanogenesis marker 3 protein compare
MMJJ_RS08155 -2.4 -5.1 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS04110 -2.4 -5.3 hypothetical protein compare
MMJJ_RS04655 -2.4 -4.8 FAD-dependent oxidoreductase compare
MMJJ_RS02045 -2.4 -3.3 molybdenum cofactor guanylyltransferase compare
MMJJ_RS00425 -2.4 -3.9 hypothetical protein compare
MMJJ_RS05260 -2.4 -5.9 ATP-grasp domain-containing protein compare
MMJJ_RS01345 -2.4 -3.9 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS04980 -2.4 -3.5 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS07155 -2.4 -8.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06855 -2.4 -2.3 DUF2104 domain-containing protein compare
MMJJ_RS06510 -2.4 -3.1 LL-diaminopimelate aminotransferase compare
MMJJ_RS06760 -2.4 -5.3 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS06785 -2.4 -9.3 RNA ligase partner protein compare
MMJJ_RS05490 -2.4 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS03095 -2.4 -2.5 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS01960 -2.4 -5.9 glycosyltransferase family 2 protein compare
MMJJ_RS08335 -2.3 -2.4 ABC transporter ATP-binding protein compare
MMJJ_RS08330 -2.3 -2.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS06200 -2.3 -2.7 phosphoglycerate dehydrogenase compare
MMJJ_RS07705 -2.3 -4.8 GTP-binding protein EngB compare
MMJJ_RS03620 -2.3 -4.0 DUF2097 domain-containing protein compare
MMJJ_RS09035 -2.3 -6.0 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06260 -2.3 -7.0 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS03650 -2.3 -6.4 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07245 -2.3 -5.3 amidohydrolase family protein compare
MMJJ_RS00215 -2.3 -3.6 CCA tRNA nucleotidyltransferase compare
MMJJ_RS04700 -2.3 -7.0 deoxyhypusine synthase compare
MMJJ_RS05415 -2.3 -2.0 hypothetical protein compare
MMJJ_RS03190 -2.2 -2.9 phosphopyruvate hydratase compare
MMJJ_RS04010 -2.2 -7.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS04650 -2.2 -5.0 nitrogenase iron protein compare
MMJJ_RS04565 -2.2 -2.5 sirohydrochlorin nickelochelatase compare
MMJJ_RS07470 -2.2 -2.8 50S ribosome-binding GTPase compare
MMJJ_RS01410 -2.2 -6.9 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS00475 -2.2 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS01860 -2.2 -12.2 tRNA guanosine(15) transglycosylase TgtA compare
MMJJ_RS07430 -2.2 -3.4 ribonuclease VapC compare
MMJJ_RS04670 -2.2 -3.8 DUF2117 domain-containing protein compare
MMJJ_RS07945 -2.1 -3.1 4Fe-4S binding protein compare
MMJJ_RS07455 -2.1 -7.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS01820 -2.1 -5.3 MJ1244 family protein compare
MMJJ_RS03160 -2.1 -9.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03245 -2.1 -1.9 UMP kinase compare
MMJJ_RS00580 -2.1 -2.3 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS08340 -2.1 -4.7 archaeoflavoprotein AfpA compare
MMJJ_RS06255 -2.1 -4.7 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06050 -2.1 -6.7 molybdopterin molybdotransferase MoeA compare
MMJJ_RS00265 -2.1 -6.1 TIGR02253 family HAD-type hydrolase compare


Specific Phenotypes

For 1 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms