Experiment set4IT030 for Methanococcus maripaludis JJ

Compare to:

Iron limitation (0.2x), H2 media

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS03205 +1.0 7.1 metallophosphoesterase compare
MMJJ_RS08065 +0.8 0.7 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS05685 +0.7 3.8 class III signal peptide-containing protein compare
MMJJ_RS09365 +0.7 3.1 hypothetical protein compare
MMJJ_RS08390 +0.6 1.1 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS06100 +0.6 4.6 rubrerythrin compare
MMJJ_RS06585 +0.5 3.7 alanine racemase compare
MMJJ_RS06470 +0.5 3.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS05350 +0.5 3.3 DUF192 domain-containing protein compare
MMJJ_RS07235 +0.5 4.5 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07220 +0.5 4.1 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS05510 +0.5 3.6 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06755 +0.5 3.8 diadenylate cyclase compare
MMJJ_RS06580 +0.5 3.2 alanine dehydrogenase compare
MMJJ_RS06515 +0.5 3.7 ribonuclease III compare
MMJJ_RS06440 +0.5 3.1 DUF4870 domain-containing protein compare
MMJJ_RS06810 +0.5 3.9 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06770 +0.5 4.0 hypothetical protein compare
MMJJ_RS07495 +0.4 2.8 4Fe-4S binding protein compare
MMJJ_RS09405 +0.4 1.7 hypothetical protein compare
MMJJ_RS05970 +0.4 1.4 MJ0307 family thioredoxin compare
MMJJ_RS05280 +0.4 0.6 hypothetical protein compare
MMJJ_RS04105 +0.4 3.7 prepilin peptidase compare
MMJJ_RS05975 +0.4 3.0 sulfurtransferase TusA family protein compare
MMJJ_RS04215 +0.4 3.5 DMT family transporter compare
MMJJ_RS07230 +0.4 2.4 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06205 +0.4 3.1 EamA family transporter compare
MMJJ_RS06500 +0.4 2.9 class I SAM-dependent methyltransferase compare
MMJJ_RS05530 +0.4 1.5 roadblock/LC7 domain-containing protein compare
MMJJ_RS07010 +0.4 2.4 preprotein translocase subunit Sec61beta compare
MMJJ_RS07915 +0.4 2.4 CBS domain-containing protein compare
MMJJ_RS06925 +0.4 0.9 GMP synthase subunit A compare
MMJJ_RS06960 +0.4 3.2 CAP domain-containing protein compare
MMJJ_RS06290 +0.3 2.3 DUF749 domain-containing protein compare
MMJJ_RS08515 +0.3 1.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06455 +0.3 2.7 YeeE/YedE family protein compare
MMJJ_RS07985 +0.3 1.5 hypothetical protein compare
MMJJ_RS07635 +0.3 2.1 response regulator transcription factor compare
MMJJ_RS06430 +0.3 1.9 haloacid dehalogenase compare
MMJJ_RS06745 +0.3 1.8 energy-coupling factor ABC transporter permease compare
MMJJ_RS07255 +0.3 2.8 hypothetical protein compare
MMJJ_RS07445 +0.3 2.4 RlmF-related methyltransferase compare
MMJJ_RS06495 +0.3 1.0 hypothetical protein compare
MMJJ_RS07365 +0.3 2.6 CatB-related O-acetyltransferase compare
MMJJ_RS06450 +0.3 2.2 DUF3343 domain-containing protein compare
MMJJ_RS07890 +0.3 2.0 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS08165 +0.3 2.0 thermonuclease family protein compare
MMJJ_RS06115 +0.3 2.2 pyruvate kinase compare
MMJJ_RS09325 +0.3 2.0 hypothetical protein compare
MMJJ_RS01010 +0.3 2.9 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06445 +0.3 2.6 hypothetical protein compare
MMJJ_RS07215 +0.3 2.6 TIGR00341 family protein compare
MMJJ_RS06505 +0.3 1.1 prephenate dehydratase compare
MMJJ_RS07860 +0.3 2.1 hypothetical protein compare
MMJJ_RS07795 +0.3 1.5 cupin domain-containing protein compare
MMJJ_RS07200 +0.3 2.5 MFS transporter compare
MMJJ_RS05915 +0.3 1.1 multiprotein bridging factor aMBF1 compare
MMJJ_RS05605 +0.3 1.7 hypothetical protein compare
MMJJ_RS07015 +0.3 0.4 PFL family protein compare
MMJJ_RS05495 +0.3 1.9 MinD/ParA family protein compare
MMJJ_RS08930 +0.3 1.9 5'/3'-nucleotidase SurE compare
MMJJ_RS07225 +0.3 2.1 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS03350 +0.3 0.5 hypothetical protein compare
MMJJ_RS07205 +0.3 1.5 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS07025 +0.3 1.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS05300 +0.3 2.5 potassium channel protein compare
MMJJ_RS06075 +0.3 1.9 DNA-binding protein Alba compare
MMJJ_RS07480 +0.3 2.2 FAD-dependent oxidoreductase compare
MMJJ_RS05695 +0.3 1.4 class III signal peptide-containing protein compare
MMJJ_RS07835 +0.3 1.8 UPF0489 family protein compare
MMJJ_RS05700 +0.3 1.9 metallophosphoesterase compare
MMJJ_RS06640 +0.3 1.8 YfcE family phosphodiesterase compare
MMJJ_RS06190 +0.3 2.0 7-cyano-7-deazaguanine synthase compare
MMJJ_RS07420 +0.3 1.9 protease complex subunit PrcB family protein compare
MMJJ_RS06680 +0.3 1.6 DUF366 family protein compare
MMJJ_RS05690 +0.3 2.3 hypothetical protein compare
MMJJ_RS03320 +0.3 1.5 hypothetical protein compare
MMJJ_RS06080 +0.2 1.8 serine/threonine protein kinase compare
MMJJ_RS05505 +0.2 2.4 hypothetical protein compare
MMJJ_RS06540 +0.2 1.1 DUF2120 domain-containing protein compare
MMJJ_RS06555 +0.2 1.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS06385 +0.2 1.1 hypothetical protein compare
MMJJ_RS06940 +0.2 1.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07385 +0.2 1.7 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS08345 +0.2 1.9 flavodoxin family protein compare
MMJJ_RS09305 +0.2 1.7 hypothetical protein compare
MMJJ_RS08370 +0.2 1.3 hypothetical protein compare
MMJJ_RS08300 +0.2 1.8 hypothetical protein compare
MMJJ_RS05980 +0.2 1.7 DUF5400 domain-containing protein compare
MMJJ_RS08820 +0.2 1.3 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS00155 +0.2 1.9 DUF2193 domain-containing protein compare
MMJJ_RS06235 +0.2 2.0 IGHMBP2 family helicase compare
MMJJ_RS01790 +0.2 1.6 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS04545 +0.2 1.2 PadR family transcriptional regulator compare
MMJJ_RS06765 +0.2 2.0 hypothetical protein compare
MMJJ_RS07670 +0.2 1.9 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS09235 +0.2 0.9 helix-turn-helix transcriptional regulator compare
MMJJ_RS08215 +0.2 1.6 radical SAM protein compare
MMJJ_RS05580 +0.2 1.5 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS01320 +0.2 1.6 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS07450 +0.2 1.1 hypothetical protein compare
MMJJ_RS07790 +0.2 1.6 hypothetical protein compare
MMJJ_RS05875 +0.2 2.0 hypothetical protein compare
MMJJ_RS06710 +0.2 1.8 TldD/PmbA family protein compare
MMJJ_RS03730 +0.2 1.2 SWIM zinc finger family protein compare
MMJJ_RS04290 +0.2 1.2 hypothetical protein compare
MMJJ_RS07210 +0.2 1.6 AmmeMemoRadiSam system protein B compare
MMJJ_RS09010 +0.2 1.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS05985 +0.2 1.2 ABC transporter substrate-binding protein compare
MMJJ_RS06105 +0.2 1.5 DUF99 family protein compare
MMJJ_RS06460 +0.2 1.3 cytochrome c compare
MMJJ_RS09225 +0.2 1.3 hypothetical protein compare
MMJJ_RS03835 +0.2 0.8 DUF504 domain-containing protein compare
MMJJ_RS07695 +0.2 1.6 glycoside hydrolase family 15 protein compare
MMJJ_RS08365 +0.2 1.1 DsrE family protein compare
MMJJ_RS07665 +0.2 1.7 formate dehydrogenase subunit alpha compare
MMJJ_RS07740 +0.2 1.3 DUF2334 domain-containing protein compare
MMJJ_RS06120 +0.2 1.5 DUF4013 domain-containing protein compare
MMJJ_RS07620 +0.2 1.5 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS05085 +0.2 1.5 hypothetical protein compare
MMJJ_RS04120 +0.2 1.3 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS05880 +0.2 1.7 hypothetical protein compare
MMJJ_RS02270 +0.2 1.1 HEPN domain-containing protein compare
MMJJ_RS09050 +0.2 1.1 hypothetical protein compare
MMJJ_RS04365 +0.2 1.1 helix-turn-helix transcriptional regulator compare
MMJJ_RS06550 +0.2 1.5 ABC transporter permease compare
MMJJ_RS07040 +0.2 0.2 preprotein translocase subunit SecY compare
MMJJ_RS00875 +0.2 1.4 hydrogenase iron-sulfur subunit compare
MMJJ_RS02865 +0.2 1.0 amino acid ABC transporter substrate-binding protein compare
MMJJ_RS06135 +0.2 1.4 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS07885 +0.2 1.4 NERD domain-containing protein compare
MMJJ_RS07640 +0.2 1.7 cache domain-containing protein compare
MMJJ_RS03035 +0.2 1.4 nitroreductase family protein compare
MMJJ_RS07610 +0.2 1.1 DUF2119 domain-containing protein compare
MMJJ_RS06790 +0.2 1.6 nucleotidyltransferase family protein compare
MMJJ_RS01365 +0.2 1.2 Mrp/NBP35 family ATP-binding protein compare
MMJJ_RS05815 +0.2 0.8 hypothetical protein compare
MMJJ_RS09390 +0.2 0.7 hypothetical protein compare
MMJJ_RS08565 +0.2 1.6 ATP-binding protein compare
MMJJ_RS06295 +0.2 1.1 DUF2096 family protein compare
MMJJ_RS06275 +0.2 0.8 hypothetical protein compare
MMJJ_RS03725 +0.2 0.5 sulfurtransferase TusA family protein compare
MMJJ_RS01745 +0.2 1.1 metal-dependent transcriptional regulator compare
MMJJ_RS05750 +0.2 1.3 flagellar accessory protein FlaH compare
MMJJ_RS06685 +0.2 1.5 S-layer protein compare
MMJJ_RS02185 +0.2 1.3 TIGR00296 family protein compare
MMJJ_RS05150 +0.2 1.3 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS00150 +0.2 0.9 DUF2180 family protein compare
MMJJ_RS08100 +0.2 1.0 hypothetical protein compare
MMJJ_RS05955 +0.2 1.3 radical SAM protein compare
MMJJ_RS06210 +0.2 0.9 hypothetical protein compare
MMJJ_RS04390 +0.2 1.3 rhomboid family intramembrane serine protease compare
MMJJ_RS03040 +0.2 1.1 lactate utilization protein compare
MMJJ_RS01950 +0.2 1.3 hypothetical protein compare
MMJJ_RS08350 +0.2 1.5 heavy metal translocating P-type ATPase compare
MMJJ_RS06735 +0.2 1.1 cobalt ECF transporter T component CbiQ compare
MMJJ_RS03805 +0.2 0.7 hypothetical protein compare
MMJJ_RS08735 +0.2 1.2 hypothetical protein compare
MMJJ_RS05200 +0.2 1.4 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS08270 +0.2 1.3 iron ABC transporter substrate-binding protein compare
MMJJ_RS08285 +0.2 1.3 class I SAM-dependent methyltransferase compare
MMJJ_RS06800 +0.2 0.8 prefoldin subunit alpha compare
MMJJ_RS06285 +0.2 1.0 YchF/TatD family DNA exonuclease compare
MMJJ_RS06055 +0.2 1.0 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS07685 +0.2 1.3 glycogen/starch synthase compare
MMJJ_RS07260 +0.2 1.0 PspC domain-containing protein compare
MMJJ_RS05585 +0.2 1.1 hypothetical protein compare
MMJJ_RS08560 +0.2 1.2 metal-dependent phosphohydrolase compare
MMJJ_RS04065 +0.1 1.1 hypothetical protein compare
MMJJ_RS08665 +0.1 1.3 transcriptional regulator compare
MMJJ_RS05895 +0.1 1.3 ABC transporter permease compare
MMJJ_RS01945 +0.1 0.9 cell division ATPase MinD compare
MMJJ_RS07815 +0.1 1.1 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS05245 +0.1 1.1 type II secretion system F family protein compare
MMJJ_RS05190 +0.1 0.7 gamma carbonic anhydrase family protein compare
MMJJ_RS00555 +0.1 0.9 hypothetical protein compare
MMJJ_RS07810 +0.1 0.9 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS04855 +0.1 1.0 ECF transporter S component compare
MMJJ_RS07645 +0.1 1.0 selenium-binding protein compare
MMJJ_RS05240 +0.1 1.2 type II secretion system F family protein compare
MMJJ_RS05890 +0.1 1.1 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS08450 +0.1 1.0 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS03575 +0.1 0.7 NUDIX hydrolase compare
MMJJ_RS05520 +0.1 1.0 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS04430 +0.1 1.1 purine NTPase compare
MMJJ_RS08455 +0.1 0.7 tetratricopeptide repeat protein compare
MMJJ_RS03090 +0.1 1.1 ECF transporter S component compare
MMJJ_RS09255 +0.1 0.5 hypothetical protein compare
MMJJ_RS05900 +0.1 1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS07800 +0.1 1.1 AMP-binding protein compare
MMJJ_RS08125 +0.1 1.0 DNA double-strand break repair nuclease NurA compare
MMJJ_RS05500 +0.1 1.2 hypothetical protein compare
MMJJ_RS02170 +0.1 0.8 2-thiouracil desulfurase family protein compare
MMJJ_RS04235 +0.1 0.7 molybdate ABC transporter permease subunit compare
MMJJ_RS04915 +0.1 1.0 protein-L-isoaspartate O-methyltransferase compare
MMJJ_RS08745 +0.1 1.0 glycosyltransferase family 9 protein compare
MMJJ_RS00870 +0.1 0.8 F420-nonreducing hydrogenase compare
MMJJ_RS05600 +0.1 1.1 sodium:solute symporter family protein compare
MMJJ_RS09110 +0.1 1.0 PEGA domain-containing protein compare
MMJJ_RS03825 +0.1 1.0 DUF1624 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms