Experiment set4IT030 for Caulobacter crescentus NA1000

Compare to:

PYE with Dimethyl Sulfoxide 5 vol%

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01712 +2.8 23.7 CopY/TcrY family transcriptional repressor compare
CCNA_00699 +2.8 14.4 LSU ribosomal protein L28P compare
CCNA_03281 +2.8 21.2 AsnC-family transcriptional regulator compare
CCNA_02103 +2.6 13.1 hypothetical protein compare
CCNA_02957 +2.5 8.8 ArsR-family transcriptional regulator compare
CCNA_03064 +2.5 21.1 PadR-family transcriptional regulator compare
CCNA_02026 +2.5 16.4 hypothetical protein compare
CCNA_00518 +2.5 18.0 LSU ribosomal protein L25P compare
CCNA_00924 +2.5 16.1 MarR/EmrR family transcriptional regulator compare
CCNA_03287 +2.5 16.4 PadR-family transcriptional regulator compare
CCNA_01242 +2.4 17.0 amino acid permease compare
CCNA_03252 +2.4 17.2 CopY/TcrY-family transcriptional regulator compare
CCNA_01790 +2.3 9.4 protein translocase subunit secG compare
CCNA_02025 +2.3 10.0 hypothetical protein compare
CCNA_00962 +2.3 14.5 MarR-family transcriptional regulator compare
CCNA_R0037 +2.3 8.2 tRNA-Glu compare
CCNA_01361 +2.3 10.5 PepSY superfamily protein compare
CCNA_00521 +2.3 8.2 antitoxin protein compare
CCNA_02910 +2.3 20.2 TonB-dependent receptor compare
CCNA_03043 +2.3 10.9 type IV pilin protein pilA compare
CCNA_03289 +2.3 17.3 HicB-family RNA-binding protein compare
CCNA_02980 +2.3 17.0 tryptophan 2,3-dioxygenase compare
CCNA_01840 +2.3 19.1 MerR-family transcriptional regulator compare
CCNA_02028 +2.3 3.2 NTF2 superfamily protein compare
CCNA_02575 +2.2 9.2 hypothetical protein compare
CCNA_01751 +2.2 10.2 aminodeoxychorismate lyase compare
CCNA_01739 +2.2 10.9 LSU ribosomal protein L9P compare
CCNA_03271 +2.2 17.5 methionine gamma-lyase compare
CCNA_03379 +2.2 7.2 Cro/CI family transcriptional regulator compare
CCNA_00846 +2.2 19.4 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01526 +2.2 11.7 flagellar biosynthesis regulatory protein flaF compare
CCNA_00162 +2.2 13.7 hypothetical protein compare
CCNA_03280 +2.2 19.5 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02535 +2.2 2.5 DNA topoisomerase I compare
CCNA_02646 +2.1 4.8 cell division protein MraZ compare
CCNA_00939 +2.1 10.1 MarR-family transcriptional regulator compare
CCNA_02030 +2.1 11.0 hypothetical protein compare
CCNA_01814 +2.1 15.9 nitrogen regulation protein ntrB compare
CCNA_03325 +2.1 10.4 hypothetical protein compare
CCNA_02021 +2.1 12.4 hypothetical protein compare
CCNA_00517 +2.1 2.1 peptidyl-tRNA hydrolase compare
CCNA_00505 +2.1 13.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01801 +2.1 10.7 hypothetical protein compare
CCNA_01094 +2.1 7.0 hypothetical protein compare
CCNA_00161 +2.1 18.0 hypothetical protein compare
CCNA_01942 +2.1 11.9 Rrf2 family protein compare
CCNA_00756 +2.1 5.0 hypothetical protein compare
CCNA_02591 +2.1 12.1 glutaredoxin compare
CCNA_03030 +2.1 15.4 cytochrome c2 compare
CCNA_03479 +2.1 13.5 MarR-family transcriptional regulator compare
CCNA_03989 +2.1 17.0 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01573 +2.0 12.1 ArsR-family transcriptional regulator compare
CCNA_01851 +2.0 17.3 quinol cytochrome oxidase polypeptide II compare
CCNA_01058 +2.0 10.9 helix-turn-helix transcriptional regulator compare
CCNA_01684 +2.0 13.7 phenylalanine-4-hydroxylase compare
CCNA_02328 +2.0 2.3 cell cycle regulatory protein GcrA compare
CCNA_01453 +2.0 10.6 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_02000 +2.0 3.9 SSU ribosomal protein S2P compare
CCNA_01979 +2.0 12.7 LexA repressor compare
CCNA_01060 +2.0 8.1 type I protein secretion ATP-binding protein RsaD compare
CCNA_01849 +2.0 13.5 quinol cytochrome oxidase polypeptide III compare
CCNA_03612 +2.0 14.2 HTH XRE-family transcriptional regulator compare
CCNA_01059 +2.0 14.2 S-layer protein rsaA compare
CCNA_01913 +2.0 15.1 MarR-family transcriptional regulator compare
CCNA_02419 +1.9 9.1 TonB1 protein compare
CCNA_00735 +1.9 3.8 beta-barrel assembly machine (BAM) protein BamF compare
CCNA_03961 +1.9 7.5 hypothetical protein compare
CCNA_02617 +1.9 15.9 histidinol-phosphate aminotransferase compare
CCNA_01931 +1.9 13.9 TetR-family transcriptional regulator compare
CCNA_00920 +1.9 7.1 hypothetical protein compare
CCNA_03936 +1.9 9.6 hypothetical protein compare
CCNA_02225 +1.9 9.3 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_02616 +1.9 14.9 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_00769 +1.9 10.4 TetR family transcriptional regulator compare
CCNA_01742 +1.9 12.4 hypothetical protein compare
CCNA_02133 +1.9 10.5 glucokinase compare
CCNA_03012 +1.9 12.3 peroxiredoxin compare
CCNA_02339 +1.9 12.2 methyltransferase compare
CCNA_03129 +1.9 13.3 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00459 +1.9 12.7 Na+/H+ antiporter nhaA compare
CCNA_03959 +1.9 1.9 hypothetical protein compare
CCNA_00954 +1.9 14.4 AAA-family response regulator flbD compare
CCNA_02447 +1.9 10.5 PspA/IM30 family regulatory protein compare
CCNA_01802 +1.9 6.1 hypothetical protein compare
CCNA_02448 +1.9 11.2 hypothetical protein compare
CCNA_02619 +1.8 13.9 stomatin/prohibitin-related protein compare
CCNA_01804 +1.8 12.2 glutathione peroxidase compare
CCNA_02289 +1.8 13.5 MarR/EmrR family transcriptional regulator compare
CCNA_03513 +1.8 8.8 cytochrome c oxidase subunit III coxC compare
CCNA_02663 +1.8 5.1 DnaK suppressor protein DksA compare
CCNA_03062 +1.8 12.1 cell wall hydrolase family protein compare
CCNA_03689 +1.8 14.1 alanine dehydrogenase compare
CCNA_02073 +1.8 7.4 cupin domain transcriptional regulator compare
CCNA_01763 +1.8 12.6 multifunctional aminopeptidase compare
CCNA_03123 +1.8 11.6 ArsR-family transcriptional regulator compare
CCNA_02732 +1.8 4.4 hypothetical protein compare
CCNA_01848 +1.8 10.1 quinol cytochrome oxidase polypeptide IV compare
CCNA_01186 +1.8 10.1 hypothetical protein compare
CCNA_01619 +1.8 12.6 NYN domain protein compare
CCNA_02042 +1.8 12.3 trigger factor chaperone compare
CCNA_03518 +1.8 14.9 cytochrome c oxidase polypeptide II coxB compare
CCNA_01850 +1.8 13.8 quinol cytochrome oxidase polypeptide I compare
CCNA_01679 +1.8 11.3 succinylglutamic semialdehyde dehydrogenase compare
CCNA_00944 +1.8 9.9 flagellar hook length determination protein compare
CCNA_03108 +1.7 14.5 TonB-dependent outer membrane receptor compare
CCNA_01505 +1.7 6.0 hypothetical protein compare
CCNA_00803 +1.7 8.6 chemotaxis protein cheW compare
CCNA_01780 +1.7 12.4 exopolyphosphatase compare
CCNA_01815 +1.7 12.5 nitrogen assimilation regulatory protein NtrC compare
CCNA_01690 +1.7 5.8 MAPEG family membrane protein compare
CCNA_00684 +1.7 7.9 anti-sigma factor, ChrR-family compare
CCNA_03635 +1.7 2.0 hypothetical protein compare
CCNA_00947 +1.7 13.7 flagellar hook protein FlgE compare
CCNA_01008 +1.7 13.2 urocanate hydratase compare
CCNA_01678 +1.7 9.7 arginine N-succinyltransferase, beta chain compare
CCNA_01964 +1.7 4.6 NADH dehydrogenase compare
CCNA_01063 +1.7 8.9 UDP-perosamine 4-acetyl transferase compare
CCNA_00834 +1.7 9.5 flagellin FljM compare
CCNA_02379 +1.7 10.9 hypothetical protein compare
CCNA_00354 +1.7 9.2 NlpC/P60 CHAP domain amidase protein compare
CCNA_00945 +1.7 9.7 chemotaxis protein MotD compare
CCNA_03420 +1.7 10.9 hypothetical protein compare
CCNA_00726 +1.7 12.3 acyl-CoA dehydrogenase compare
CCNA_00441 +1.6 10.8 chemotaxis receiver domain protein cheYI compare
CCNA_00375 +1.6 6.9 hypothetical protein compare
CCNA_03805 +1.6 12.8 PadR-family transcriptional regulator compare
CCNA_01813 +1.6 9.9 tRNA-dihydrouridine synthase compare
CCNA_02576 +1.6 11.6 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03215 +1.6 11.4 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_00497 +1.6 10.9 putative rhamnosyl transferase compare
CCNA_03964 +1.6 4.9 hypothetical protein compare
CCNA_00438 +1.6 7.7 hypothetical protein compare
CCNA_02242 +1.6 11.2 PHB granule-associated protein, phasin2 compare
CCNA_03089 +1.6 10.8 hypothetical protein compare
CCNA_01528 +1.6 10.5 flagellin fljK compare
CCNA_00224 +1.6 12.1 TonB-dependent receptor protein compare
CCNA_03372 +1.6 7.1 bacterioferritin-associated ferredoxin compare
CCNA_02416 +1.6 9.5 DNA-binding protein HU compare
CCNA_00895 +1.6 8.7 hypothetical protein compare
CCNA_01181 +1.6 8.8 hypothetical protein compare
CCNA_00400 +1.6 9.9 MarR/EmrR-family transcriptional regulator compare
CCNA_01655 +1.6 9.0 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01393 +1.6 11.7 soluble lytic murein transglycosylase compare
CCNA_00998 +1.6 8.7 ROS/MUCR transcriptional regulator compare
CCNA_03951 +1.6 6.1 hypothetical protein compare
CCNA_02475 +1.6 12.2 transcriptional regulator vanR compare
CCNA_02534 +1.6 2.1 hypothetical protein compare
CCNA_01193 +1.6 12.2 amylosucrase compare
CCNA_03519 +1.6 6.6 PadR-family transcriptional regulator compare
CCNA_00163 +1.6 10.9 exopolysaccharide transport family protein compare
CCNA_01235 +1.6 8.7 AcrR-family transcriptional regulator compare
CCNA_00028 +1.6 6.3 TonB-dependent receptor compare
CCNA_01959 +1.6 5.8 3-dehydroquinate dehydratase compare
CCNA_00036 +1.6 3.1 ribosome-binding factor A compare
CCNA_03762 +1.5 5.0 acetolactate synthase-related protein compare
CCNA_01339 +1.5 7.6 ArsR-family transcriptional regulator compare
CCNA_02156 +1.5 11.0 hypothetical protein compare
CCNA_00447 +1.5 8.9 chemotaxis protein cheD compare
CCNA_03498 +1.5 12.1 MarR-family transcriptional regulator compare
CCNA_03464 +1.5 7.8 glycine cleavage system H protein compare
CCNA_02036 +1.5 4.8 DNA-binding protein HU compare
CCNA_01020 +1.5 9.5 LacI-family transcriptional regulator compare
CCNA_00031 +1.5 9.7 toxin protein VapC compare
CCNA_02081 +1.5 7.6 Sec-independent protein translocase protein tatB compare
CCNA_00168 +1.5 12.3 polysaccharide export protein compare
CCNA_01061 +1.5 6.1 type I secretion adaptor protein RsaE compare
CCNA_00527 +1.5 10.0 hypothetical protein compare
CCNA_03072 +1.5 5.5 TetR-family transcriptional regulator compare
CCNA_02316 +1.5 9.4 hypothetical protein compare
CCNA_00919 +1.5 6.5 hypothetical protein compare
CCNA_01926 +1.5 7.4 GGDEF diguanylate cyclase DgcB compare
CCNA_03938 +1.5 5.4 hypothetical protein compare
CCNA_02976 +1.5 7.9 MCP-signal associated domain protein compare
CCNA_02644 +1.5 4.4 cell division protein FtsL compare
CCNA_00443 +1.5 9.0 chemotaxis protein cheW compare
CCNA_03515 +1.5 7.7 hypothetical protein compare
CCNA_01541 +1.5 11.0 LysR-family transcriptional regulator compare
CCNA_01624 +1.5 5.1 orotate phosphoribosyltransferase compare
CCNA_02273 +1.5 10.1 glutathione peroxidase compare
CCNA_00675 +1.5 7.0 VapC-like PIN domain ribonuclease compare
CCNA_02341 +1.5 9.8 small heat shock protein compare
CCNA_02805 +1.5 7.7 hypothetical protein compare
CCNA_02846 +1.5 10.2 DegP/HtrA-family serine protease compare
CCNA_02942 +1.5 4.6 nucleoside-diphosphate-sugar epimerase compare
CCNA_03371 +1.4 7.8 bacterioferritin compare
CCNA_01553 +1.4 8.5 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_03863 +1.4 5.1 hypothetical protein compare
CCNA_01533 +1.4 6.4 hypothetical protein compare
CCNA_01995 +1.4 1.7 phosphatidate cytidylyltransferase compare
CCNA_01691 +1.4 8.4 tRNA/rRNA methyltransferase compare
CCNA_01525 +1.4 9.1 flagellar biosynthesis repressor flbT compare
CCNA_00950 +1.4 11.4 flagellar M-ring protein FliF compare
CCNA_03808 +1.4 10.0 organic solvent resistance transport system Ttg2C protein compare
CCNA_02553 +1.4 11.5 ATP-dependent clp protease ATP-binding subunit ClpA compare
CCNA_02297 +1.4 6.9 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02728 +1.4 8.4 hypothetical protein compare
CCNA_02467 +1.4 9.6 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_00322 +1.4 10.9 hypothetical protein compare
CCNA_01220 +1.4 6.6 7-keto-8-aminopelargonate synthetase compare
CCNA_01968 +1.4 4.3 pentapeptide repeats containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Dimethyl Sulfoxide in Caulobacter crescentus NA1000

For stress Dimethyl Sulfoxide across organisms