Experiment set4IT026 for Shewanella loihica PV-4
LB with L-Lysine 200 mM
Group: stressMedia: LB + L-Lysine (200 mM)
Culturing: PV4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Adam on 4/30/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 906 F3,F4
Specific Phenotypes
For 1 genes in this experiment
For stress L-Lysine in Shewanella loihica PV-4
For stress L-Lysine across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glycerolipid and Glycerophospholipid Metabolism in Bacteria | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| cardiolipin biosynthesis II | 3 | 3 | 1 |
| cardiolipin biosynthesis III | 3 | 2 | 1 |
| cardiolipin biosynthesis I | 3 | 2 | 1 |
| phosphatidylglycerol biosynthesis II | 6 | 6 | 1 |
| phosphatidylglycerol biosynthesis I | 6 | 6 | 1 |
| superpathway of phospholipid biosynthesis III (E. coli) | 12 | 10 | 1 |
| superpathway of cardiolipin biosynthesis (bacteria) | 13 | 9 | 1 |
| type I lipoteichoic acid biosynthesis (S. aureus) | 17 | 5 | 1 |
| superpathway of phospholipid biosynthesis II (plants) | 28 | 10 | 1 |