Experiment set4IT026 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate FREE

200 most important genes:

  gene name fitness t score description  
MMP_RS03600 -6.0 -3.0 triose-phosphate isomerase compare
MMP_RS03315 -5.1 -2.0 ferrous iron transport protein A compare
MMP_RS03435 -4.3 -2.5 ketol-acid reductoisomerase compare
MMP_RS04890 -3.5 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01830 -2.8 -2.1 tRNA-Val compare
MMP_RS04605 -2.6 -5.1 cobalt ECF transporter T component CbiQ compare
MMP_RS03640 -2.6 -5.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07600 -2.6 -2.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08790 -2.6 -2.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS03015 -2.5 -11.7 GTP 3' 8-cyclase MoaA compare
MMP_RS01225 -2.5 -7.7 DUF5379 domain-containing protein compare
MMP_RS05515 -2.5 -9.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS02240 -2.4 -4.9 methanogenesis marker 7 protein compare
MMP_RS02195 -2.3 -3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06295 -2.3 -8.0 methanogenesis marker 14 protein compare
MMP_RS08745 -2.3 -6.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS06730 -2.3 -2.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS06400 -2.3 -1.7 4Fe-4S binding protein compare
MMP_RS04620 -2.2 -11.0 cobalt transporter CbiM compare
MMP_RS01265 -2.2 -4.2 hypothetical protein compare
MMP_RS03700 -2.2 -8.4 sodium:proton antiporter compare
MMP_RS08715 -2.2 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS02280 -2.2 -1.1 DUF211 domain-containing protein compare
MMP_RS00130 -2.1 -1.5 nickel-responsive transcriptional regulator NikR compare
MMP_RS04720 -2.1 -2.6 DedA family protein compare
MMP_RS00305 -2.1 -2.1 phosphoribosyl-ATP diphosphatase compare
MMP_RS07845 -2.1 -2.5 LL-diaminopimelate aminotransferase compare
MMP_RS02010 -2.1 -7.2 PHP domain-containing protein compare
MMP_RS04615 -2.1 -4.4 PDGLE domain-containing protein compare
MMP_RS05930 -2.1 -2.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS01800 -2.1 -4.9 TIGR00303 family protein compare
MMP_RS07005 -2.1 -0.8 4Fe-4S binding protein compare
MMP_RS06925 -2.0 -3.1 ribonuclease VapC4 compare
MMP_RS01700 -2.0 -1.3 dihydroxy-acid dehydratase compare
MMP_RS03155 -2.0 -8.3 precorrin-6A reductase compare
MMP_RS08435 -2.0 -2.0 Era-like GTP-binding protein compare
MMP_RS06355 -2.0 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01500 -2.0 -2.6 CBS domain-containing protein compare
MMP_RS07750 -2.0 -4.7 DUF357 domain-containing protein compare
MMP_RS01005 -1.9 -1.7 riboflavin synthase compare
MMP_RS06230 -1.9 -2.6 helix-turn-helix domain-containing protein compare
MMP_RS00895 -1.9 -3.4 hypothetical protein compare
MMP_RS08300 -1.9 -1.2 metal-sulfur cluster assembly factor compare
MMP_RS05920 -1.9 -0.7 50S ribosomal protein L37e compare
MMP_RS01610 -1.8 -2.6 hypothetical protein compare
MMP_RS02355 -1.8 -3.5 30S ribosomal protein S27ae compare
MMP_RS04685 -1.8 -3.1 DUF126 domain-containing protein compare
MMP_RS02135 -1.8 -4.4 DUF5612 domain-containing protein compare
MMP_RS02900 -1.8 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01175 -1.8 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02875 -1.8 -9.0 chorismate pyruvate-lyase family protein compare
MMP_RS06350 -1.8 -6.8 HesA/MoeB/ThiF family protein compare
MMP_RS07630 -1.8 -1.6 ATP-binding cassette domain-containing protein compare
MMP_RS06475 -1.7 -5.2 FAD-dependent oxidoreductase compare
MMP_RS00750 -1.7 -2.2 fumarate hydratase compare
MMP_RS01220 -1.7 -5.5 hypothetical protein compare
MMP_RS05250 -1.7 -1.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00685 -1.7 -4.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08210 -1.7 -2.3 phosphatidylglycerophosphatase A compare
MMP_RS07635 -1.7 -6.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06340 -1.7 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04500 -1.7 -12.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS04775 -1.6 -2.9 adenosylhomocysteinase compare
MMP_RS09020 -1.6 -1.5 hypothetical protein compare
MMP_RS07645 -1.6 -5.4 aldehyde dehydrogenase family protein compare
MMP_RS03035 -1.6 -3.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02145 -1.6 -5.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS05540 -1.6 -3.7 hypothetical protein compare
MMP_RS02235 -1.6 -7.6 CBS domain-containing protein compare
MMP_RS06885 -1.6 -2.4 50S ribosome-binding GTPase compare
MMP_RS06105 -1.6 -7.3 hydrogenase maturation peptidase HycI compare
MMP_RS06130 -1.5 -3.1 peptidylprolyl isomerase compare
MMP_RS06285 -1.5 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05265 -1.5 -2.6 2-isopropylmalate synthase compare
MMP_RS00810 -1.5 -6.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06120 -1.5 -1.6 UPF0147 family protein compare
MMP_RS00735 -1.5 -3.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05425 -1.5 -5.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03445 -1.5 -1.0 methanogenesis marker 17 protein compare
MMP_RS07735 -1.5 -0.9 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06895 -1.5 -1.6 selenocysteine-specific translation elongation factor compare
MMP_RS07380 -1.5 -1.8 transcription elongation factor Spt5 compare
MMP_RS02165 -1.5 -7.2 tRNA-dihydrouridine synthase compare
MMP_RS02110 -1.5 -2.4 hypothetical protein compare
MMP_RS02800 -1.5 -5.2 nucleotidyltransferase domain-containing protein compare
MMP_RS04585 -1.5 -7.3 AIR synthase related protein compare
MMP_RS07525 -1.5 -5.6 4Fe-4S binding protein compare
MMP_RS07580 -1.5 -2.4 DUF356 domain-containing protein compare
MMP_RS06670 -1.5 -4.4 glucose-6-phosphate isomerase compare
MMP_RS00110 -1.5 -2.6 hypothetical protein compare
MMP_RS00985 -1.5 -3.9 CDC48 family AAA ATPase compare
MMP_RS05430 -1.4 -5.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS06020 -1.4 -4.5 archaeoflavoprotein AfpA compare
MMP_RS06270 -1.4 -4.8 TIGR00300 family protein compare
MMP_RS03140 -1.4 -8.4 hypothetical protein compare
MMP_RS08785 -1.4 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS06625 -1.4 -1.8 DNA primase compare
MMP_RS01545 -1.4 -1.1 CBS domain-containing protein compare
MMP_RS08095 -1.3 -6.7 dethiobiotin synthase compare
MMP_RS01755 -1.3 -1.2 DUF2097 domain-containing protein compare
MMP_RS03025 -1.3 -3.8 molybdenum cofactor guanylyltransferase compare
MMP_RS05910 -1.3 -3.4 cell division ATPase MinD compare
MMP_RS07615 -1.3 -4.2 energy-coupling factor ABC transporter permease compare
MMP_RS07575 -1.3 -2.3 RNA ligase partner protein compare
MMP_RS02885 -1.3 -9.5 molybdopterin biosynthesis protein compare
MMP_RS06630 -1.3 -0.9 UPF0058 family protein compare
MMP_RS00300 -1.3 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05445 -1.3 -6.2 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS06370 -1.3 -4.6 biotin synthase BioB compare
MMP_RS08635 -1.2 -1.2 UbiA family prenyltransferase compare
MMP_RS08100 -1.2 -6.2 8-amino-7-oxononanoate synthase compare
MMP_RS07730 -1.2 -1.6 pyruvate synthase subunit beta compare
MMP_RS08105 -1.2 -5.0 6-carboxyhexanoate--CoA ligase compare
MMP_RS01380 -1.2 -1.7 PHP domain-containing protein compare
MMP_RS07200 -1.2 -4.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05925 -1.2 -2.2 small nuclear ribonucleoprotein compare
MMP_RS06680 -1.2 -6.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS05845 -1.2 -1.7 tRNA-intron lyase compare
MMP_RS06685 -1.2 -6.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS04780 -1.2 -2.5 ribonuclease P compare
MMP_RS07620 -1.2 -3.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07710 -1.2 -5.1 cell division protein FtsZ compare
MMP_RS02245 -1.2 -2.5 hypothetical protein compare
MMP_RS07625 -1.2 -2.8 cobalt ECF transporter T component CbiQ compare
MMP_RS07445 -1.2 -3.9 helix-turn-helix domain-containing protein compare
MMP_RS01795 -1.2 -1.4 methanogenesis marker 6 protein compare
MMP_RS06865 -1.2 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS03095 -1.2 -3.5 diphthine synthase compare
MMP_RS06395 -1.2 -2.6 ThiF family adenylyltransferase compare
MMP_RS03960 -1.1 -0.7 hypothetical protein compare
MMP_RS07195 -1.1 -6.2 M20 family metallo-hydrolase compare
MMP_RS03400 -1.1 -1.6 archease compare
MMP_RS04850 -1.1 -8.4 UPF0254 family protein compare
MMP_RS06110 -1.1 -2.4 ATP-dependent protease LonB compare
MMP_RS01900 -1.1 -6.4 hypothetical protein compare
MMP_RS04875 -1.1 -4.6 energy-converting hydrogenase B subunit P compare
MMP_RS06215 -1.1 -2.1 30S ribosomal protein S6e compare
MMP_RS05550 -1.1 -0.5 cation:proton antiporter compare
MMP_RS03475 -1.1 -0.5 hypothetical protein compare
MMP_RS01085 -1.1 -1.5 hypothetical protein compare
MMP_RS00520 -1.1 -1.3 RNA polymerase Rpb4 family protein compare
MMP_RS05345 -1.1 -5.2 hypothetical protein compare
MMP_RS01890 -1.1 -2.0 nucleotide sugar dehydrogenase compare
MMP_RS07695 -1.1 -3.5 DUF3236 domain-containing protein compare
MMP_RS05950 -1.1 -6.0 nickel-dependent hydrogenase large subunit compare
MMP_RS00050 -1.1 -5.0 AarF/UbiB family protein compare
MMP_RS06940 -1.1 -2.4 polyprenyl diphosphate synthase compare
MMP_RS00115 -1.1 -7.0 radical SAM protein compare
MMP_RS00695 -1.1 -0.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05640 -1.0 -4.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07355 -1.0 -0.8 transcription factor S compare
MMP_RS00725 -1.0 -4.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07420 -1.0 -4.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03250 -1.0 -3.4 MJ1244 family protein compare
MMP_RS03080 -1.0 -2.5 universal stress protein compare
MMP_RS03320 -1.0 -2.6 metal-dependent transcriptional regulator compare
MMP_RS01925 -1.0 -4.1 DUF1616 domain-containing protein compare
MMP_RS06725 -1.0 -4.7 hypothetical protein compare
MMP_RS00900 -1.0 -1.2 50S ribosomal protein L39e compare
MMP_RS07435 -1.0 -1.4 GMP synthase subunit A compare
MMP_RS01045 -1.0 -4.6 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS08330 -1.0 -3.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS07755 -1.0 -0.8 DUF555 domain-containing protein compare
MMP_RS01840 -1.0 -5.8 TIGR00289 family protein compare
MMP_RS04870 -0.9 -3.7 TIGR02253 family HAD-type hydrolase compare
MMP_RS08645 -0.9 -3.6 UPF0179 family protein compare
MMP_RS08320 -0.9 -4.1 molybdopterin molybdotransferase MoeA compare
MMP_RS05545 -0.9 -3.9 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05525 -0.9 -3.7 calcium/sodium antiporter compare
MMP_RS08940 -0.9 -1.0 MetS family NSS transporter small subunit compare
MMP_RS02175 -0.9 -0.6 DUF1611 domain-containing protein compare
MMP_RS08820 -0.9 -3.3 hypothetical protein compare
MMP_RS01875 -0.9 -3.5 N-acetyltransferase compare
MMP_RS03385 -0.9 -0.8 cation diffusion facilitator family transporter compare
MMP_RS01385 -0.9 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06345 -0.9 -3.8 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS05580 -0.9 -6.8 glycosyltransferase compare
MMP_RS04710 -0.9 -1.1 hypothetical protein compare
MMP_RS01325 -0.9 -1.3 dihydroneopterin aldolase family protein compare
MMP_RS00730 -0.9 -3.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08365 -0.9 -3.0 energy conserving hydrogenase EhbF compare
MMP_RS03125 -0.9 -3.4 cell division ATPase MinD compare
MMP_RS03580 -0.9 -2.1 signal recognition particle-docking protein FtsY compare
MMP_RS02130 -0.9 -2.9 zinc metalloprotease HtpX compare
MMP_RS07605 -0.9 -1.9 diadenylate cyclase compare
MMP_RS07425 -0.9 -2.5 GTP-binding protein compare
MMP_RS07705 -0.9 -4.0 transcriptional regulator compare
MMP_RS06980 -0.9 -3.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS08460 -0.9 -1.1 proteasome-activating nucleotidase compare
MMP_RS07955 -0.8 -3.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06700 -0.8 -4.2 hypothetical protein compare
MMP_RS08335 -0.8 -3.9 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS05245 -0.8 -5.4 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08345 -0.8 -5.6 4Fe-4S binding protein compare
MMP_RS08360 -0.8 -2.8 hypothetical protein compare
MMP_RS01270 -0.8 -5.7 prepilin peptidase compare
MMP_RS05850 -0.8 -2.6 Ldh family oxidoreductase compare
MMP_RS05460 -0.8 -4.3 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS03535 -0.8 -1.3 helix-turn-helix transcriptional regulator compare
MMP_RS05955 -0.8 -1.5 CoB--CoM heterodisulfide reductase subunit C compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 casamino acids across organisms