Experiment set4IT025 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Flavone 0.125 mg/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.9 -3.4 SirA-like protein compare
Psyr_3008 -4.4 -9.3 Undecaprenyl-diphosphatase compare
Psyr_4740 -4.4 -8.4 thiazole-phosphate synthase compare
Psyr_0951 -4.2 -3.5 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -3.9 -10.6 phosphomethylpyrimidine kinase, putative compare
Psyr_4341 -3.7 -9.0 thiamine-phosphate diphosphorylase compare
Psyr_4009 -3.6 -10.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1613 -3.5 -6.6 septum site-determining protein MinC compare
Psyr_4687 -3.4 -8.8 biotin synthase compare
Psyr_4683 -3.4 -5.9 dethiobiotin synthase compare
Psyr_0454 -3.2 -6.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0565 -3.1 -7.9 Protein of unknown function UPF0126 compare
Psyr_4686 -2.9 -7.3 8-amino-7-oxononanoate synthase compare
Psyr_3202 -2.7 -3.7 NADH dehydrogenase subunit G compare
Psyr_0917 -2.6 -11.9 ABC-2 compare
Psyr_0014 -2.4 -5.2 lipid A biosynthesis acyltransferase compare
Psyr_4684 -2.4 -3.8 biotin synthesis protein BioC compare
Psyr_0918 -2.3 -10.8 ABC transporter compare
Psyr_0831 -2.2 -3.7 Two-component response regulator CbrB compare
Psyr_5133 -2.2 -5.1 tRNA modification GTPase trmE compare
Psyr_2980 -2.2 -5.2 UDP-glucose pyrophosphorylase compare
Psyr_4362 -2.2 -4.9 Rare lipoprotein A compare
Psyr_3193 -2.2 -3.4 Transcription factor jumonji, jmjC compare
Psyr_0571 -2.1 -4.6 tRNA isopentenyltransferase compare
Psyr_0826 -2.1 -7.6 glucose-6-phosphate isomerase compare
Psyr_4091 -2.1 -4.4 8-oxo-dGTPase compare
Psyr_0529 -2.1 -6.9 Glycosyl transferase, group 1 compare
Psyr_3013 -2.1 -3.5 magnesium chelatase subunit ChlD compare
Psyr_4008 -1.9 -14.2 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2080 -1.9 -8.6 aminodeoxychorismate synthase, subunit I compare
Psyr_0383 -1.8 -2.6 Twin-arginine translocation protein TatB compare
Psyr_4991 -1.8 -3.4 hypothetical protein compare
Psyr_3701 -1.8 -3.6 thioredoxin, putative compare
Psyr_0487 -1.6 -2.9 glutathione synthase compare
Psyr_0849 -1.6 -9.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4566 -1.6 -8.7 Peptidase M23B compare
Psyr_4408 -1.5 -8.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_1373 -1.5 -3.0 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_0255 -1.5 -2.7 glutamate-cysteine ligase compare
Psyr_3287 -1.5 -2.9 DNA topoisomerase I compare
Psyr_0575 -1.5 -3.4 protease FtsH subunit HflC compare
Psyr_3135 -1.5 -2.4 transcriptional regulator, GntR family compare
Psyr_1556 -1.4 -3.5 hypothetical protein compare
Psyr_3262 -1.4 -2.8 dnaK suppressor protein, putative compare
Psyr_4007 -1.4 -6.8 Secretion protein HlyD compare
Psyr_4634 -1.4 -1.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_3199 -1.4 -3.0 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4424 -1.3 -7.1 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4136 -1.3 -2.1 BolA-like protein compare
Psyr_4203 -1.3 -2.0 SsrA-binding protein compare
Psyr_1268 -1.3 -5.6 extracellular solute-binding protein, family 3:SLT compare
Psyr_1614 -1.3 -4.1 lipid A biosynthesis acyltransferase compare
Psyr_3198 -1.3 -2.6 NADH dehydrogenase subunit B compare
Psyr_2292 -1.2 -3.0 L-glutaminase compare
Psyr_5135 -1.2 -2.3 Protein of unknown function DUF37 compare
Psyr_4418 -1.2 -1.8 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_5129 -1.2 -4.3 chromosome segregation DNA-binding protein compare
Psyr_4622 -1.2 -3.5 Nucleotidyl transferase compare
Psyr_0574 -1.2 -4.7 protease FtsH subunit HflK compare
Psyr_2854 -1.2 -4.3 conserved hypothetical protein compare
Psyr_1650 -1.2 -2.3 aminodeoxychorismate lyase apoprotein compare
Psyr_3808 -1.2 -2.8 hypothetical protein compare
Psyr_4940 -1.2 -2.8 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_4087 -1.2 -1.9 Protein of unknown function DUF520 compare
Psyr_4618 -1.2 -3.7 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0393 -1.2 -3.7 Protein of unknown function DUF971 compare
Psyr_1748 -1.2 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_2855 -1.2 -3.6 methionine synthase (B12-independent) compare
Psyr_1816 -1.1 -3.1 transcriptional regulator, GntR family compare
Psyr_1910 -1.1 -4.5 VacJ-like lipoprotein compare
Psyr_0378 -1.1 -6.9 Glycosyl transferase, family 2 compare
Psyr_0976 -1.1 -4.4 Malate:quinone-oxidoreductase compare
Psyr_3179 -1.1 -2.3 DNA translocase FtsK compare
Psyr_4627 -1.1 -2.5 dimethyladenosine transferase compare
Psyr_4893 -1.0 -1.9 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_1864 -1.0 -2.9 spermidine synthase compare
Psyr_0377 -1.0 -5.5 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_0579 -1.0 -6.7 RNAse R compare
Psyr_0827 -1.0 -2.9 pantothenate synthetase compare
Psyr_1097 -1.0 -1.8 glycine cleavage system H protein compare
Psyr_4093 -1.0 -4.4 glutamate N-acetyltransferase compare
Psyr_5132 -1.0 -1.6 Glucose-inhibited division protein A subfamily compare
Psyr_4581 -1.0 -1.5 anthranilate synthase, component II compare
Psyr_4089 -1.0 -4.1 PAS compare
Psyr_1667 -1.0 -3.8 Colicin V production protein compare
Psyr_2973 -1.0 -1.7 Glyoxalase I compare
Psyr_0303 -1.0 -1.9 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3954 -1.0 -4.6 GTP-binding protein LepA compare
Psyr_2897 -1.0 -4.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1371 -1.0 -5.1 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_3691 -0.9 -4.9 conserved hypothetical protein compare
Psyr_5067 -0.9 -4.4 conserved hypothetical protein compare
Psyr_4830 -0.9 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2285 -0.9 -1.9 Twin-arginine translocation pathway signal compare
Psyr_5065 -0.9 -5.2 ATP-dependent DNA helicase UvrD compare
Psyr_3208 -0.9 -1.8 NADH dehydrogenase subunit M compare
Psyr_3034 -0.9 -1.4 conserved hypothetical protein compare
Psyr_0259 -0.9 -2.7 Osmolarity sensor protein envZ compare
Psyr_1638 -0.9 -2.1 RNAse E compare
Psyr_1419 -0.9 -2.1 preQ(0) biosynthesis protein QueC compare
Psyr_0532 -0.9 -3.7 conserved hypothetical protein compare
Psyr_5072 -0.9 -1.3 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3581 -0.9 -3.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_4512 -0.9 -4.3 putative phage-related protein compare
Psyr_2847 -0.9 -2.4 hypothetical protein compare
Psyr_3480 -0.9 -3.2 Flagellar basal-body rod protein FlgC compare
Psyr_0281 -0.9 -2.5 ABC transporter compare
Psyr_4194 -0.8 -3.1 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_1227 -0.8 -2.2 Queuosine biosynthesis protein compare
Psyr_1751 -0.8 -3.3 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3600 -0.8 -2.2 transcriptional regulator, LysR family compare
Psyr_4278 -0.8 -1.4 regulatory protein, LuxR compare
Psyr_4887 -0.8 -6.1 Peptidase S41A, C-terminal protease compare
Psyr_2095 -0.8 -3.4 Conserved TM helix compare
Psyr_4151 -0.8 -1.3 Phosphocarrier HPr protein compare
Psyr_4361 -0.8 -2.3 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_3419 -0.8 -3.2 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0524 -0.8 -2.7 Lipopolysaccharide kinase compare
Psyr_2256 -0.8 -3.1 ABC transporter compare
Psyr_1408 -0.8 -1.6 Holliday junction endonuclease RuvC compare
Psyr_1108 -0.8 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_4843 -0.8 -3.9 NUDIX hydrolase compare
Psyr_1056 -0.8 -2.9 Poly(beta-D-mannuronate) lyase compare
Psyr_3905 -0.8 -4.3 glycerol kinase compare
Psyr_0060 -0.8 -3.8 Protein of unknown function DUF513 compare
Psyr_1277 -0.8 -1.8 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_0785 -0.7 -2.8 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_4407 -0.7 -2.3 phosphoribosylamine--glycine ligase compare
Psyr_0941 -0.7 -3.3 Conserved hypothetical protein 92 compare
Psyr_3835 -0.7 -1.5 hypothetical protein compare
Psyr_0017 -0.7 -3.6 16S rRNA m(5)C-967 methyltransferase compare
Psyr_1929 -0.7 -3.1 hypothetical protein compare
Psyr_0034 -0.7 -2.4 tryptophan synthase, beta chain compare
Psyr_1747 -0.7 -1.9 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3882 -0.7 -1.7 conserved hypothetical protein compare
Psyr_0832 -0.7 -3.9 Two-component sensor kinase CbrA compare
Psyr_4593 -0.7 -2.5 sigma factor domain protein compare
Psyr_3867 -0.7 -1.6 hypothetical protein compare
Psyr_3554 -0.7 -1.4 Carbon storage regulator compare
Psyr_1984 -0.7 -1.7 3-isopropylmalate dehydratase, small subunit compare
Psyr_4682 -0.7 -1.1 conserved hypothetical protein compare
Psyr_1269 -0.7 -2.6 phosphoribosylformylglycinamidine synthase compare
Psyr_1749 -0.7 -3.7 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2462 -0.7 -3.4 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_4153 -0.7 -2.0 conserved hypothetical protein compare
Psyr_4716 -0.7 -1.5 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_4158 -0.7 -4.3 conserved hypothetical protein compare
Psyr_4078 -0.6 -4.6 AmpG-related permease compare
Psyr_0857 -0.6 -1.8 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1118 -0.6 -2.6 Aldose 1-epimerase compare
Psyr_4138 -0.6 -2.0 Toluene tolerance compare
Psyr_0184 -0.6 -1.1 Protein of unknown function DUF484 compare
Psyr_0817 -0.6 -1.8 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_1410 -0.6 -2.0 Holliday junction DNA helicase RuvB compare
Psyr_0835 -0.6 -2.6 transcriptional regulator, TraR/DksA family compare
Psyr_4623 -0.6 -4.2 Aminoglycoside phosphotransferase compare
Psyr_3585 -0.6 -1.8 Sua5/YciO/YrdC/YwlC compare
Psyr_0395 -0.6 -2.5 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_1528 -0.6 -2.3 Arc-like DNA binding protein compare
Psyr_3107 -0.6 -1.6 conserved hypothetical protein compare
Psyr_0447 -0.6 -1.5 malonate decarboxylase subunit, putative compare
Psyr_4688 -0.6 -3.1 Phosphoribosyltransferase compare
Psyr_1920 -0.6 -2.3 carboxyphosphonoenolpyruvate phosphonomutase-like protein compare
Psyr_0033 -0.6 -2.3 tryptophan synthase, alpha chain compare
Psyr_4343 -0.6 -3.3 Sel1-like repeat protein compare
Psyr_4178 -0.6 -3.5 tRNA pseudouridine synthase B compare
Psyr_2433 -0.6 -2.0 conserved hypothetical protein compare
Psyr_3806 -0.6 -2.9 hypothetical protein compare
Psyr_4882 -0.6 -3.5 protein translocase subunit secB compare
Psyr_2383 -0.6 -2.1 Protein of unknown function DUF72 compare
Psyr_0119 -0.6 -1.6 CDS compare
Psyr_1251 -0.6 -2.2 quinoprotein compare
Psyr_0491 -0.6 -2.7 chemotaxis sensory transducer compare
Psyr_0282 -0.6 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3680 -0.6 -2.0 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_2974 -0.6 -3.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
Psyr_0178 -0.6 -2.6 regulator of nucleoside diphosphate kinase compare
Psyr_1317 -0.6 -1.0 conserved hypothetical protein compare
Psyr_3665 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0680 -0.6 -1.7 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_0979 -0.6 -1.1 conserved hypothetical protein compare
Psyr_1460 -0.6 -2.8 hypothetical protein compare
Psyr_5102 -0.6 -2.2 ABC transporter compare
Psyr_0947 -0.6 -3.2 TPR repeat protein:TPR repeat protein compare
Psyr_5130 -0.6 -3.3 chromosome segregation ATPase compare
Psyr_4363 -0.6 -2.2 membrane-bound lytic murein transglycosylase B compare
Psyr_2471 -0.6 -1.1 hydroxymethylglutaryl-CoA lyase compare
Psyr_3637 -0.6 -4.1 Glycosyl transferase, family 4 compare
Psyr_0215 -0.6 -4.1 Exodeoxyribonuclease III xth compare
Psyr_3462 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0920 -0.6 -4.8 Glycosyl transferase, group 1 compare
Psyr_3939 -0.6 -2.1 transcriptional regulator, GntR family compare
Psyr_1555 -0.6 -2.4 Cobyrinic acid a,c-diamide synthase compare
Psyr_2468 -0.6 -2.2 Enoyl-CoA hydratase/isomerase compare
Psyr_3779 -0.5 -1.4 GCN5-related N-acetyltransferase compare
Psyr_1400 -0.5 -4.5 outer membrane porin compare
Psyr_2850 -0.5 -1.8 hypothetical protein compare
Psyr_2927 -0.5 -1.5 transcriptional regulator, TetR family compare
Psyr_4891 -0.5 -2.4 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2346 -0.5 -2.3 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Flavone across organisms