Experiment set4IT025 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Flavone 0.125 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Psyr_3692 +1.7 2.8 conserved hypothetical protein compare
Psyr_2765 +1.3 2.5 conserved domain protein compare
Psyr_3673 +1.2 2.5 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_4464 +1.0 1.5 lipoprotein, putative compare
Psyr_2069 +1.0 3.4 conserved hypothetical protein compare
Psyr_3688 +1.0 2.0 conserved hypothetical protein compare
Psyr_2757 +0.9 1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1728 +0.9 2.0 tRNA--hydroxylase compare
Psyr_0464 +0.9 1.7 hypothetical protein compare
Psyr_1270 +0.8 1.5 conserved hypothetical protein compare
Psyr_1676 +0.8 2.8 1-aminocyclopropane-1-carboxylate deaminase, putative compare
Psyr_4335 +0.8 1.5 transcriptional regulator, AsnC family compare
Psyr_2386 +0.8 1.8 hypothetical protein compare
Psyr_2264 +0.8 2.2 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2594 +0.8 1.4 unknown conserved protein in bacilli compare
Psyr_1573 +0.8 1.5 cyclic nucleotide-binding protein compare
Psyr_2337 +0.8 2.2 conserved hypothetical protein compare
Psyr_5030 +0.8 3.6 chorismate lyase compare
Psyr_4224 +0.8 2.2 conserved hypothetical protein compare
Psyr_0622 +0.8 1.6 transcriptional regulator, XRE family compare
Psyr_4068 +0.8 2.9 conserved hypothetical protein compare
Psyr_2049 +0.7 1.8 K+ transporting ATPase, KdpC subunit compare
Psyr_4491 +0.7 2.2 Deoxyribose-phosphate aldolase compare
Psyr_0437 +0.7 2.1 acyl carrier protein, putative compare
Psyr_2807 +0.7 0.8 NinB compare
Psyr_1722 +0.7 2.2 Amidohydrolase 2 compare
Psyr_1304 +0.7 1.6 CheW-like protein compare
Psyr_2221 +0.7 2.0 sarcosine oxidase, gamma subunit compare
Psyr_3618 +0.7 2.4 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_4939 +0.7 2.6 conserved hypothetical protein compare
Psyr_4577 +0.7 3.3 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_4490 +0.7 1.2 transcriptional regulator, DeoR family compare
Psyr_3373 +0.7 2.5 conserved hypothetical protein compare
Psyr_1687 +0.7 2.1 Rhomboid-like protein compare
Psyr_1154 +0.7 1.3 Copper/Zinc superoxide dismutase compare
Psyr_4774 +0.7 0.9 Hypothetical protein compare
Psyr_2253 +0.7 2.0 Phosphonate metabolism compare
Psyr_0844 +0.6 2.6 Protein of unknown function DUF446 compare
Psyr_2706 +0.6 3.2 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
Psyr_1678 +0.6 1.3 Hypothetical protein compare
Psyr_2593 +0.6 1.5 ABC transporter compare
Psyr_2873 +0.6 2.4 Acyl-CoA dehydrogenase, C-terminal compare
Psyr_1717 +0.6 1.1 TPR repeat:von Willebrand factor, type A compare
Psyr_3288 +0.6 1.9 conserved hypothetical protein compare
Psyr_4300 +0.6 2.5 DNA polymerase III, epsilon subunit compare
Psyr_2540 +0.6 1.7 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3236 +0.6 2.9 transcriptional regulator, LysR family compare
Psyr_2668 +0.6 2.2 Helix-turn-helix, Fis-type compare
Psyr_2887 +0.6 1.3 Endoribonuclease L-PSP compare
Psyr_1883 +0.6 2.5 Hypothetical protein compare
Psyr_4786 +0.6 0.8 hypothetical protein compare
Psyr_2030 +0.6 0.9 Calcium-binding EF-hand compare
Psyr_1024 +0.6 1.8 Flavodoxin/nitric oxide synthase compare
Psyr_3226 +0.6 1.7 Transcriptional activator RfaH compare
Psyr_3677 +0.6 1.7 Aminotransferase, class I and II compare
Psyr_0299 +0.6 2.4 transcriptional regulator, GntR family compare
Psyr_3624 +0.6 1.9 transcriptional regulator, LysR family compare
Psyr_3935 +0.6 1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_3518 +0.6 2.5 hypothetical protein compare
Psyr_3227 +0.6 2.3 Glycosyl transferase, family 2 compare
Psyr_1540 +0.6 2.5 hypothetical protein compare
Psyr_1944 +0.6 1.3 Thioesterase compare
Psyr_3755 +0.6 1.1 conserved hypothetical protein compare
Psyr_2112 +0.6 0.6 Protein with unknown function DUF469 compare
Psyr_0212 +0.6 1.4 Conserved hypothetical protein 255 compare
Psyr_3793 +0.6 1.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3886 +0.6 1.2 methionyl-tRNA synthetase compare
Psyr_3284 +0.6 1.7 SOS cell division inhibitor SulA compare
Psyr_3681 +0.6 1.4 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_0349 +0.5 1.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0995 +0.5 2.0 Flavin reductase-like protein compare
Psyr_3662 +0.5 1.3 NAD(P)H dehydrogenase (quinone) compare
Psyr_0784 +0.5 0.8 CheW-like protein compare
Psyr_3357 +0.5 1.0 transcriptional regulator, LysR family compare
Psyr_3723 +0.5 1.6 CDS compare
Psyr_3031 +0.5 1.7 Thiolase compare
Psyr_2998 +0.5 2.5 conserved hypothetical protein compare
Psyr_3631 +0.5 2.2 GreA/GreB family elongation factor compare
Psyr_2758 +0.5 2.5 ABC transporter:TOBE compare
Psyr_2243 +0.5 1.3 Endoribonuclease L-PSP compare
Psyr_5051 +0.5 2.5 Aspartate ammonia-lyase compare
Psyr_2915 +0.5 1.6 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_2946 +0.5 2.6 4-oxalocrotonate tautomerase compare
Psyr_2741 +0.5 2.0 Beta-lactamase compare
Psyr_1689 +0.5 2.3 conserved hypothetical protein compare
Psyr_0436 +0.5 1.4 Phosphopantetheine-binding protein compare
Psyr_2064 +0.5 1.7 conserved hypothetical protein compare
Psyr_1949 +0.5 1.6 ABC-3 compare
Psyr_2246 +0.5 3.0 Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer compare
Psyr_4516 +0.5 3.1 hypothetical protein compare
Psyr_0136 +0.5 2.3 outer membrane transport energization protein ExbB compare
Psyr_1487 +0.5 1.6 conserved hypothetical protein compare
Psyr_3620 +0.5 1.3 hypothetical protein compare
Psyr_4942 +0.5 1.9 HAD-superfamily hydrolase, subfamily IA, variant 3 compare
Psyr_0404 +0.5 2.1 Fimbrial assembly compare
Psyr_3210 +0.5 2.6 Protein of unknown function UPF0118 compare
Psyr_0694 +0.5 1.9 ABC transporter compare
Psyr_3249 +0.5 2.3 conserved hypothetical protein compare
Psyr_4115 +0.5 1.2 phosphoheptose isomerase compare
Psyr_3220 +0.5 3.1 Aminotransferase, class V compare
Psyr_1941 +0.5 0.8 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_4765 +0.5 2.4 TraX compare
Psyr_2105 +0.5 2.0 conserved hypothetical protein compare
Psyr_1937 +0.5 1.6 UspA compare
Psyr_1017 +0.5 1.0 type III effector HopJ1 compare
Psyr_3000 +0.5 1.1 methyltransferase, putative compare
Psyr_1867 +0.5 2.4 conserved hypothetical protein compare
Psyr_2238 +0.5 1.8 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_0441 +0.5 1.3 conserved hypothetical protein compare
Psyr_2315 +0.5 2.4 methyl-accepting chemotaxis sensory transducer compare
Psyr_0781 +0.5 1.9 Protein-glutamate methylesterase compare
Psyr_2209 +0.5 1.8 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_2872 +0.5 1.4 hypothetical protein compare
Psyr_3770 +0.5 2.6 Propeptide, PepSY amd peptidase M4 compare
Psyr_2055 +0.5 2.1 Transglutaminase-like protein compare
Psyr_1275 +0.5 1.8 Protein of unknown function DUF1289 compare
Psyr_4665 +0.5 3.0 membrane protein, putative compare
Psyr_4116 +0.5 0.7 Transport-associated protein compare
Psyr_4580 +0.5 1.5 anthranilate phosphoribosyltransferase compare
Psyr_3240 +0.5 0.8 CTP synthase compare
Psyr_2257 +0.5 1.6 Amidohydrolase compare
Psyr_2079 +0.4 2.0 phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase compare
Psyr_2894 +0.4 1.0 conserved hypothetical protein compare
Psyr_1721 +0.4 2.5 moxR protein, putative compare
Psyr_0199 +0.4 1.3 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_1337 +0.4 1.8 Conserved hypothetical protein ArsC related protein compare
Psyr_2954 +0.4 1.9 Phospholipase/Carboxylesterase compare
Psyr_2051 +0.4 1.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_5029 +0.4 1.2 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_2830 +0.4 1.0 conserved hypothetical protein compare
Psyr_0616 +0.4 1.4 conserved domain protein compare
Psyr_5052 +0.4 3.9 Sodium:alanine symporter compare
Psyr_3667 +0.4 1.1 conserved hypothetical protein compare
Psyr_3896 +0.4 0.8 BFD-like [2Fe-2S]-binding region compare
Psyr_3657 +0.4 1.4 DSBA oxidoreductase compare
Psyr_2297 +0.4 1.4 glucose 1-dehydrogenase compare
Psyr_2531 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_4656 +0.4 1.8 hypothetical protein compare
Psyr_1388 +0.4 1.7 Protein of unknown function UPF0066 compare
Psyr_2184 +0.4 1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_1973 +0.4 1.2 Aspartate transaminase compare
Psyr_3246 +0.4 1.5 Ku compare
Psyr_3296 +0.4 1.3 MOSC:MOSC, N-terminal beta barrel compare
Psyr_2553 +0.4 1.4 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases-related enzyme compare
Psyr_4262 +0.4 0.8 lipoprotein, putative compare
Psyr_2456 +0.4 0.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0165 +0.4 1.9 GCN5-related N-acetyltransferase compare
Psyr_2604 +0.4 1.6 conserved hypothetical protein; putative membrane protein compare
Psyr_3432 +0.4 1.3 MotA/TolQ/ExbB proton channel compare
Psyr_3555 +0.4 1.0 aspartate kinase compare
Psyr_1432 +0.4 3.1 hypothetical protein compare
Psyr_4845 +0.4 1.3 conserved hypothetical protein compare
Psyr_0405 +0.4 1.3 Pilus assembly protein, PilO compare
Psyr_3241 +0.4 1.3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_2215 +0.4 2.0 CheW-like protein compare
Psyr_4999 +0.4 1.6 hypothetical protein compare
Psyr_3661 +0.4 1.5 Fumarate hydratase, class II compare
Psyr_2503 +0.4 2.3 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1718 +0.4 1.0 von Willebrand factor, type A compare
Psyr_4481 +0.4 1.4 outer membrane transport energization protein ExbB compare
Psyr_4620 +0.4 1.8 conserved hypothetical protein compare
Psyr_0743 +0.4 1.7 CDS compare
Psyr_0081 +0.4 0.9 ABC transporter compare
Psyr_1308 +0.4 1.5 Protein-glutamate methylesterase compare
Psyr_2435 +0.4 1.4 Xylulokinase compare
Psyr_2274 +0.4 2.2 glutamate synthase (NADPH) GltB1 subunit compare
Psyr_3630 +0.4 1.3 conserved hypothetical protein compare
Psyr_1988 +0.4 1.3 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_2382 +0.4 2.1 conservedhypothetical protein compare
Psyr_4928 +0.4 1.3 conserved hypothetical protein compare
Psyr_1621 +0.4 1.3 Autoinducer synthesis protein compare
Psyr_3684 +0.4 1.1 NLP/P60 compare
Psyr_1806 +0.4 1.0 Ureidoglycolate hydrolase compare
Psyr_0861 +0.4 2.4 Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_5059 +0.4 2.4 GCN5-related N-acetyltransferase compare
Psyr_4254 +0.4 0.8 conserved hypothetical protein compare
Psyr_5064 +0.4 2.0 transcriptional regulator, RpiR family compare
Psyr_0545 +0.4 1.2 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_2269 +0.4 1.5 GTP cyclohydrolase I compare
Psyr_0099 +0.4 0.7 Conserved hypothetical protein compare
Psyr_1377 +0.4 1.2 CinA, C-terminal compare
Psyr_3180 +0.4 1.2 Leucyl/phenylalanyl-tRNA--protein transferase compare
Psyr_2589 +0.4 1.8 IucA/IucC compare
Psyr_1813 +0.4 2.1 molybdenum cofactor sulfurylase compare
Psyr_2801 +0.4 2.0 hypothetical protein compare
Psyr_3973 +0.4 1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1999 +0.4 1.5 OmpA/MotB compare
Psyr_0613 +0.4 2.2 conserved hypothetical protein compare
Psyr_3092 +0.4 1.4 PAP2 superfamily protein compare
Psyr_0078 +0.4 2.1 Beta-lactamase-like protein compare
Psyr_0271 +0.4 2.3 conserved hypothetical protein compare
Psyr_3018 +0.4 1.3 membrane protein, putative compare
Psyr_3085 +0.4 1.7 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_0666 +0.4 1.1 transport system permease protein compare
Psyr_3998 +0.4 2.0 Heat shock protein DnaJ, N-terminal compare
Psyr_0639 +0.4 1.8 lipoprotein, putative compare
Psyr_3751 +0.4 1.0 Carbon storage regulator compare
Psyr_3083 +0.4 1.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_4450 +0.4 1.6 transcriptional regulator, TetR family compare
Psyr_3774 +0.4 1.7 PAS compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Flavone across organisms