Experiment set4IT025 for Caulobacter crescentus NA1000

Compare to:

PYE with benzoic acid 0.2 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02030 +4.1 14.6 hypothetical protein compare
CCNA_02028 +4.0 7.3 NTF2 superfamily protein compare
CCNA_01712 +3.9 34.4 CopY/TcrY family transcriptional repressor compare
CCNA_02416 +3.9 20.5 DNA-binding protein HU compare
CCNA_01242 +3.8 25.0 amino acid permease compare
CCNA_00699 +3.8 13.1 LSU ribosomal protein L28P compare
CCNA_02026 +3.8 20.5 hypothetical protein compare
CCNA_01060 +3.7 19.9 type I protein secretion ATP-binding protein RsaD compare
CCNA_01061 +3.6 13.7 type I secretion adaptor protein RsaE compare
CCNA_02103 +3.6 21.5 hypothetical protein compare
CCNA_01815 +3.5 22.6 nitrogen assimilation regulatory protein NtrC compare
CCNA_01059 +3.4 31.4 S-layer protein rsaA compare
CCNA_03379 +3.4 10.3 Cro/CI family transcriptional regulator compare
CCNA_R0037 +3.4 13.2 tRNA-Glu compare
CCNA_02957 +3.4 12.6 ArsR-family transcriptional regulator compare
CCNA_03287 +3.4 28.5 PadR-family transcriptional regulator compare
CCNA_01094 +3.3 10.3 hypothetical protein compare
CCNA_03252 +3.3 24.0 CopY/TcrY-family transcriptional regulator compare
CCNA_03064 +3.3 20.8 PadR-family transcriptional regulator compare
CCNA_02025 +3.2 13.7 hypothetical protein compare
CCNA_03271 +3.2 25.4 methionine gamma-lyase compare
CCNA_02980 +3.2 22.6 tryptophan 2,3-dioxygenase compare
CCNA_00161 +3.2 27.7 hypothetical protein compare
CCNA_01814 +3.2 22.3 nitrogen regulation protein ntrB compare
CCNA_03612 +3.2 24.1 HTH XRE-family transcriptional regulator compare
CCNA_00924 +3.2 22.9 MarR/EmrR family transcriptional regulator compare
CCNA_00162 +3.1 15.4 hypothetical protein compare
CCNA_03043 +3.1 11.9 type IV pilin protein pilA compare
CCNA_01526 +3.1 15.3 flagellar biosynthesis regulatory protein flaF compare
CCNA_01790 +3.1 13.3 protein translocase subunit secG compare
CCNA_01923 +3.1 16.2 ATP-dependent RNA helicase compare
CCNA_01840 +3.1 24.5 MerR-family transcriptional regulator compare
CCNA_02242 +3.0 20.9 PHB granule-associated protein, phasin2 compare
CCNA_03805 +3.0 22.4 PadR-family transcriptional regulator compare
CCNA_01361 +3.0 12.7 PepSY superfamily protein compare
CCNA_03479 +3.0 17.6 MarR-family transcriptional regulator compare
CCNA_00518 +3.0 17.0 LSU ribosomal protein L25P compare
CCNA_01324 +3.0 15.9 LSU ribosomal protein L30P compare
CCNA_03989 +3.0 24.2 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00684 +3.0 8.2 anti-sigma factor, ChrR-family compare
CCNA_01964 +2.9 12.9 NADH dehydrogenase compare
CCNA_02225 +2.9 16.4 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_00013 +2.9 24.3 protein-PII uridylyltransferase compare
CCNA_01525 +2.9 17.1 flagellar biosynthesis repressor flbT compare
CCNA_02910 +2.9 24.6 TonB-dependent receptor compare
CCNA_01058 +2.8 18.2 helix-turn-helix transcriptional regulator compare
CCNA_00920 +2.8 12.4 hypothetical protein compare
CCNA_01573 +2.8 12.8 ArsR-family transcriptional regulator compare
CCNA_03281 +2.8 23.6 AsnC-family transcriptional regulator compare
CCNA_00846 +2.8 23.9 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01931 +2.8 20.5 TetR-family transcriptional regulator compare
CCNA_01942 +2.8 15.2 Rrf2 family protein compare
CCNA_01739 +2.8 16.0 LSU ribosomal protein L9P compare
CCNA_02021 +2.7 13.9 hypothetical protein compare
CCNA_03123 +2.7 16.7 ArsR-family transcriptional regulator compare
CCNA_00296 +2.7 15.8 phosphate regulon response regulator PhoB compare
CCNA_03325 +2.7 12.8 hypothetical protein compare
CCNA_02591 +2.7 16.0 glutaredoxin compare
CCNA_02000 +2.7 3.9 SSU ribosomal protein S2P compare
CCNA_03280 +2.7 23.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_03961 +2.7 9.7 hypothetical protein compare
CCNA_00505 +2.7 16.7 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_03420 +2.7 12.9 hypothetical protein compare
CCNA_01583 +2.7 5.5 phosphate-binding protein compare
CCNA_03464 +2.7 10.1 glycine cleavage system H protein compare
CCNA_02448 +2.7 14.0 hypothetical protein compare
CCNA_03129 +2.7 17.6 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_02339 +2.7 16.5 methyltransferase compare
CCNA_01086 +2.7 16.7 GTP-binding protein lepA compare
CCNA_00517 +2.6 2.6 peptidyl-tRNA hydrolase compare
CCNA_01684 +2.6 16.3 phenylalanine-4-hydroxylase compare
CCNA_03108 +2.6 21.2 TonB-dependent outer membrane receptor compare
CCNA_01453 +2.6 12.7 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01801 +2.6 14.7 hypothetical protein compare
CCNA_01913 +2.6 19.4 MarR-family transcriptional regulator compare
CCNA_01751 +2.6 9.7 aminodeoxychorismate lyase compare
CCNA_01186 +2.6 13.4 hypothetical protein compare
CCNA_02617 +2.6 20.4 histidinol-phosphate aminotransferase compare
CCNA_01742 +2.5 14.9 hypothetical protein compare
CCNA_01802 +2.5 7.4 hypothetical protein compare
CCNA_03062 +2.5 15.8 cell wall hydrolase family protein compare
CCNA_03215 +2.5 16.8 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_03689 +2.5 19.0 alanine dehydrogenase compare
CCNA_03030 +2.5 12.2 cytochrome c2 compare
CCNA_02073 +2.5 8.8 cupin domain transcriptional regulator compare
CCNA_02576 +2.5 17.0 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_00028 +2.5 12.6 TonB-dependent receptor compare
CCNA_03951 +2.5 11.3 hypothetical protein compare
CCNA_02619 +2.5 18.1 stomatin/prohibitin-related protein compare
CCNA_00400 +2.4 14.8 MarR/EmrR-family transcriptional regulator compare
CCNA_00389 +2.4 3.7 aminomethyltransferase family protein compare
CCNA_00944 +2.4 14.0 flagellar hook length determination protein compare
CCNA_03808 +2.4 15.4 organic solvent resistance transport system Ttg2C protein compare
CCNA_00803 +2.4 10.7 chemotaxis protein cheW compare
CCNA_03519 +2.4 8.7 PadR-family transcriptional regulator compare
CCNA_02447 +2.4 13.1 PspA/IM30 family regulatory protein compare
CCNA_02616 +2.4 18.5 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_03518 +2.4 20.1 cytochrome c oxidase polypeptide II coxB compare
CCNA_02341 +2.4 12.8 small heat shock protein compare
CCNA_01804 +2.4 13.5 glutathione peroxidase compare
CCNA_00031 +2.4 14.1 toxin protein VapC compare
CCNA_03089 +2.4 15.6 hypothetical protein compare
CCNA_02575 +2.4 10.2 hypothetical protein compare
CCNA_00447 +2.4 13.0 chemotaxis protein cheD compare
CCNA_03705 +2.3 7.1 hypothetical protein compare
CCNA_03498 +2.3 14.5 MarR-family transcriptional regulator compare
CCNA_01008 +2.3 18.1 urocanate hydratase compare
CCNA_02434 +2.3 10.9 hypothetical protein compare
CCNA_02379 +2.3 12.6 hypothetical protein compare
CCNA_00441 +2.3 14.4 chemotaxis receiver domain protein cheYI compare
CCNA_01690 +2.3 6.0 MAPEG family membrane protein compare
CCNA_03893 +2.3 5.8 hypothetical protein compare
CCNA_01968 +2.3 7.3 pentapeptide repeats containing protein compare
CCNA_00032 +2.3 10.4 antitoxin protein VapB compare
CCNA_00947 +2.3 18.2 flagellar hook protein FlgE compare
CCNA_02324 +2.3 12.8 heat shock protein 33 hsp33 compare
CCNA_00438 +2.3 10.0 hypothetical protein compare
CCNA_00939 +2.3 10.9 MarR-family transcriptional regulator compare
CCNA_00895 +2.3 11.4 hypothetical protein compare
CCNA_00497 +2.3 14.4 putative rhamnosyl transferase compare
CCNA_00962 +2.3 13.8 MarR-family transcriptional regulator compare
CCNA_03132 +2.3 8.5 transcriptional regulator, antitoxin protein higA compare
CCNA_03012 +2.3 15.2 peroxiredoxin compare
CCNA_00945 +2.3 12.4 chemotaxis protein MotD compare
CCNA_02646 +2.2 4.0 cell division protein MraZ compare
CCNA_00834 +2.2 11.4 flagellin FljM compare
CCNA_00954 +2.2 16.8 AAA-family response regulator flbD compare
CCNA_01851 +2.2 17.7 quinol cytochrome oxidase polypeptide II compare
CCNA_01678 +2.2 11.7 arginine N-succinyltransferase, beta chain compare
CCNA_02663 +2.2 6.3 DnaK suppressor protein DksA compare
CCNA_02475 +2.2 17.6 transcriptional regulator vanR compare
CCNA_02036 +2.2 4.7 DNA-binding protein HU compare
CCNA_02419 +2.2 9.7 TonB1 protein compare
CCNA_01235 +2.2 11.0 AcrR-family transcriptional regulator compare
CCNA_01528 +2.2 12.9 flagellin fljK compare
CCNA_00163 +2.2 15.3 exopolysaccharide transport family protein compare
CCNA_02387 +2.2 16.1 glutathione reductase compare
CCNA_00726 +2.2 16.8 acyl-CoA dehydrogenase compare
CCNA_01379 +2.2 13.8 type I secretion outer membrane protein rsaFb compare
CCNA_02760 +2.2 6.9 hypothetical protein compare
CCNA_00998 +2.2 13.0 ROS/MUCR transcriptional regulator compare
CCNA_02037 +2.2 11.4 ATP-dependent endopeptidase Lon compare
CCNA_01593 +2.2 13.5 Xaa-pro aminopeptidase compare
CCNA_02063 +2.2 13.1 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_01020 +2.2 13.2 LacI-family transcriptional regulator compare
CCNA_03372 +2.2 9.2 bacterioferritin-associated ferredoxin compare
CCNA_00027 +2.2 4.5 2OG-Fe(II) oxygenase compare
CCNA_02330 +2.2 11.6 hypothetical protein compare
CCNA_03214 +2.2 11.5 hypothetical protein compare
CCNA_03762 +2.2 8.4 acetolactate synthase-related protein compare
CCNA_01553 +2.2 10.9 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_03959 +2.2 2.4 hypothetical protein compare
CCNA_00375 +2.2 9.0 hypothetical protein compare
CCNA_01622 +2.1 9.1 Rsh ppGpp hydrolase-synthetase compare
CCNA_02156 +2.1 14.6 hypothetical protein compare
CCNA_03352 +2.1 10.1 YebC/PmpR transcriptional regulator compare
CCNA_00448 +2.1 14.3 cheU protein compare
CCNA_03635 +2.1 2.7 hypothetical protein compare
CCNA_00257 +2.1 10.4 adenosylhomocysteinase compare
CCNA_02976 +2.1 10.8 MCP-signal associated domain protein compare
CCNA_00044 +2.1 8.3 ribosome maturation protein RimP compare
CCNA_02732 +2.1 4.8 hypothetical protein compare
CCNA_00752 +2.1 13.0 3-hydroxybutyryl-CoA dehydrogenase compare
CCNA_01679 +2.1 12.9 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01655 +2.1 11.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01813 +2.1 12.4 tRNA-dihydrouridine synthase compare
CCNA_02287 +2.1 13.9 TetR-family transcriptional regulator compare
CCNA_00322 +2.1 15.3 hypothetical protein compare
CCNA_00705 +2.1 7.4 hypothetical protein compare
CCNA_01393 +2.1 14.4 soluble lytic murein transglycosylase compare
CCNA_02805 +2.1 10.8 hypothetical protein compare
CCNA_03688 +2.1 14.7 AsnC-family transcriptional regulator compare
CCNA_01624 +2.1 4.8 orotate phosphoribosyltransferase compare
CCNA_01918 +2.1 12.6 cyclic di-GMP effector protein PopA compare
CCNA_01608 +2.1 9.3 TetR-family transcriptional regulator compare
CCNA_01691 +2.1 11.2 tRNA/rRNA methyltransferase compare
CCNA_03936 +2.1 7.5 hypothetical protein compare
CCNA_00352 +2.1 12.4 integral membrane protein compare
CCNA_01181 +2.1 11.2 hypothetical protein compare
CCNA_00807 +2.0 5.5 ribonuclease P protein component compare
CCNA_03105 +2.0 9.8 DnaJ domain protein compare
CCNA_01926 +2.0 9.3 GGDEF diguanylate cyclase DgcB compare
CCNA_03722 +2.0 18.1 glutamate synthase (NADPH) large chain GltB compare
CCNA_02367 +2.0 13.2 CelR-family transcriptional regulator compare
CCNA_02395 +2.0 7.9 hypothetical protein compare
CCNA_00440 +2.0 5.3 STAS domain protein compare
CCNA_03807 +2.0 11.2 organic solvent resistance transport system Ttg2D protein compare
CCNA_01541 +2.0 14.7 LysR-family transcriptional regulator compare
CCNA_01339 +2.0 9.0 ArsR-family transcriptional regulator compare
CCNA_02004 +2.0 4.4 SOS-induced inhibitor of cell division SidA compare
CCNA_00443 +2.0 10.3 chemotaxis protein cheW compare
CCNA_01199 +2.0 12.8 glucose-1-phosphate thymidylyltransferase compare
CCNA_02289 +2.0 13.5 MarR/EmrR family transcriptional regulator compare
CCNA_00168 +2.0 15.8 polysaccharide export protein compare
CCNA_00769 +2.0 11.0 TetR family transcriptional regulator compare
CCNA_03513 +2.0 10.5 cytochrome c oxidase subunit III coxC compare
CCNA_00950 +2.0 15.5 flagellar M-ring protein FliF compare
CCNA_03557 +2.0 8.0 hypothetical protein compare
CCNA_03354 +2.0 6.3 5-formyltetrahydrofolate cyclo-ligase compare
CCNA_03938 +2.0 7.1 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress benzoic acid in Caulobacter crescentus NA1000

For stress benzoic acid across organisms