Experiment set4IT024 for Shewanella loihica PV-4

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LB with 1-ethyl-3-methylimidazolium chloride 50 mM

Group: stress
Media: LB + 1-ethyl-3-methylimidazolium chloride (50 mM)
Culturing: PV4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Adam on 4/30/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 906 D7,D8

Specific Phenotypes

For 2 genes in this experiment

For stress 1-ethyl-3-methylimidazolium chloride in Shewanella loihica PV-4

For stress 1-ethyl-3-methylimidazolium chloride across organisms

SEED Subsystems

Subsystem #Specific
Polyamine Metabolism 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
spermidine biosynthesis I 2 2 1
spermine biosynthesis 2 1 1
aminopropylcadaverine biosynthesis 3 1 1
spermidine biosynthesis III 4 2 1
superpathway of polyamine biosynthesis I 8 5 1
superpathway of polyamine biosynthesis II 8 4 1
L-methionine salvage cycle III 11 6 1
L-methionine salvage cycle I (bacteria and plants) 12 6 1
superpathway of arginine and polyamine biosynthesis 17 14 1