Experiment set4IT024 for Caulobacter crescentus NA1000

Compare to:

PYE with Aluminum chloride hydrate 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02000 +2.0 2.9 SSU ribosomal protein S2P compare
CCNA_02025 +2.0 10.2 hypothetical protein compare
CCNA_00518 +2.0 12.5 LSU ribosomal protein L25P compare
CCNA_01242 +2.0 14.8 amino acid permease compare
CCNA_01526 +1.9 10.9 flagellar biosynthesis regulatory protein flaF compare
CCNA_01094 +1.9 6.1 hypothetical protein compare
CCNA_01712 +1.9 12.6 CopY/TcrY family transcriptional repressor compare
CCNA_R0037 +1.9 7.5 tRNA-Glu compare
CCNA_02910 +1.9 16.3 TonB-dependent receptor compare
CCNA_02980 +1.8 13.7 tryptophan 2,3-dioxygenase compare
CCNA_01814 +1.8 14.4 nitrogen regulation protein ntrB compare
CCNA_01840 +1.8 15.0 MerR-family transcriptional regulator compare
CCNA_03513 +1.8 10.8 cytochrome c oxidase subunit III coxC compare
CCNA_02575 +1.8 6.8 hypothetical protein compare
CCNA_02103 +1.8 12.1 hypothetical protein compare
CCNA_02028 +1.8 2.6 NTF2 superfamily protein compare
CCNA_00505 +1.7 10.2 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01942 +1.7 9.8 Rrf2 family protein compare
CCNA_03280 +1.7 15.4 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01913 +1.7 12.7 MarR-family transcriptional regulator compare
CCNA_00924 +1.7 8.1 MarR/EmrR family transcriptional regulator compare
CCNA_00080 +1.7 2.7 LexA-related transcriptional repressor compare
CCNA_01742 +1.7 11.2 hypothetical protein compare
CCNA_01730 +1.7 10.8 amidophosphoribosyltransferase compare
CCNA_00699 +1.7 6.5 LSU ribosomal protein L28P compare
CCNA_02021 +1.7 8.7 hypothetical protein compare
CCNA_00939 +1.7 8.4 MarR-family transcriptional regulator compare
CCNA_02416 +1.7 10.4 DNA-binding protein HU compare
CCNA_01624 +1.7 5.3 orotate phosphoribosyltransferase compare
CCNA_R0054 +1.7 4.6 tRNA-Gly compare
CCNA_03287 +1.7 12.1 PadR-family transcriptional regulator compare
CCNA_02732 +1.7 4.5 hypothetical protein compare
CCNA_03479 +1.7 11.0 MarR-family transcriptional regulator compare
CCNA_03271 +1.6 13.2 methionine gamma-lyase compare
CCNA_03961 +1.6 7.0 hypothetical protein compare
CCNA_03518 +1.6 13.8 cytochrome c oxidase polypeptide II coxB compare
CCNA_01739 +1.6 7.9 LSU ribosomal protein L9P compare
CCNA_01324 +1.6 6.8 LSU ribosomal protein L30P compare
CCNA_02591 +1.6 8.0 glutaredoxin compare
CCNA_01979 +1.6 8.3 LexA repressor compare
CCNA_03951 +1.6 9.6 hypothetical protein compare
CCNA_01361 +1.6 6.7 PepSY superfamily protein compare
CCNA_02957 +1.6 5.6 ArsR-family transcriptional regulator compare
CCNA_01505 +1.6 6.3 hypothetical protein compare
CCNA_02617 +1.6 13.3 histidinol-phosphate aminotransferase compare
CCNA_02339 +1.6 11.1 methyltransferase compare
CCNA_00920 +1.6 6.3 hypothetical protein compare
CCNA_03129 +1.6 11.5 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_03989 +1.6 13.5 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01684 +1.6 10.6 phenylalanine-4-hydroxylase compare
CCNA_02026 +1.6 8.8 hypothetical protein compare
CCNA_01801 +1.6 7.2 hypothetical protein compare
CCNA_01751 +1.6 6.8 aminodeoxychorismate lyase compare
CCNA_01573 +1.6 8.9 ArsR-family transcriptional regulator compare
CCNA_03936 +1.5 7.2 hypothetical protein compare
CCNA_01804 +1.5 9.4 glutathione peroxidase compare
CCNA_01931 +1.5 11.6 TetR-family transcriptional regulator compare
CCNA_01968 +1.5 4.5 pentapeptide repeats containing protein compare
CCNA_01964 +1.5 6.2 NADH dehydrogenase compare
CCNA_01802 +1.5 5.3 hypothetical protein compare
CCNA_02646 +1.5 3.7 cell division protein MraZ compare
CCNA_00919 +1.5 4.9 hypothetical protein compare
CCNA_00756 +1.5 5.1 hypothetical protein compare
CCNA_03281 +1.5 12.1 AsnC-family transcriptional regulator compare
CCNA_03108 +1.5 12.5 TonB-dependent outer membrane receptor compare
CCNA_02616 +1.5 12.0 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01420 +1.5 9.9 NrdR family transcriptional regulator compare
CCNA_02760 +1.5 5.4 hypothetical protein compare
CCNA_03325 +1.5 8.0 hypothetical protein compare
CCNA_03372 +1.5 6.5 bacterioferritin-associated ferredoxin compare
CCNA_01815 +1.5 10.3 nitrogen assimilation regulatory protein NtrC compare
CCNA_00846 +1.5 13.1 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_01186 +1.4 8.5 hypothetical protein compare
CCNA_00895 +1.4 8.9 hypothetical protein compare
CCNA_01690 +1.4 6.6 MAPEG family membrane protein compare
CCNA_03379 +1.4 5.1 Cro/CI family transcriptional regulator compare
CCNA_03123 +1.4 9.4 ArsR-family transcriptional regulator compare
CCNA_03762 +1.4 5.2 acetolactate synthase-related protein compare
CCNA_03514 +1.4 9.8 cytochrome c oxidase assembly protein ctaG compare
CCNA_01679 +1.4 9.4 succinylglutamic semialdehyde dehydrogenase compare
CCNA_03062 +1.4 10.0 cell wall hydrolase family protein compare
CCNA_01058 +1.4 7.5 helix-turn-helix transcriptional regulator compare
CCNA_03252 +1.4 11.0 CopY/TcrY-family transcriptional regulator compare
CCNA_00954 +1.4 11.3 AAA-family response regulator flbD compare
CCNA_02225 +1.4 8.9 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_00735 +1.4 3.2 beta-barrel assembly machine (BAM) protein BamF compare
CCNA_02075 +1.4 1.5 peptidoglycan binding endopeptidase DipM compare
CCNA_02619 +1.4 10.7 stomatin/prohibitin-related protein compare
CCNA_00162 +1.4 8.5 hypothetical protein compare
CCNA_01235 +1.4 8.0 AcrR-family transcriptional regulator compare
CCNA_03064 +1.4 8.6 PadR-family transcriptional regulator compare
CCNA_02073 +1.4 5.7 cupin domain transcriptional regulator compare
CCNA_01528 +1.4 9.4 flagellin fljK compare
CCNA_00506 +1.4 9.6 cytochrome b compare
CCNA_03959 +1.4 1.7 hypothetical protein compare
CCNA_00161 +1.3 10.6 hypothetical protein compare
CCNA_03043 +1.3 7.4 type IV pilin protein pilA compare
CCNA_00944 +1.3 8.4 flagellar hook length determination protein compare
CCNA_03089 +1.3 8.3 hypothetical protein compare
CCNA_01525 +1.3 7.7 flagellar biosynthesis repressor flbT compare
CCNA_00447 +1.3 8.9 chemotaxis protein cheD compare
CCNA_00521 +1.3 3.5 antitoxin protein compare
CCNA_02475 +1.3 10.6 transcriptional regulator vanR compare
CCNA_00834 +1.3 8.3 flagellin FljM compare
CCNA_02448 +1.3 7.9 hypothetical protein compare
CCNA_00441 +1.3 8.6 chemotaxis receiver domain protein cheYI compare
CCNA_03215 +1.3 9.2 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01728 +1.3 8.0 short chain dehydrogenase compare
CCNA_00803 +1.3 7.0 chemotaxis protein cheW compare
CCNA_00769 +1.3 6.8 TetR family transcriptional regulator compare
CCNA_02063 +1.3 7.6 beta-barrel assembly machine (BAM) protein BamD compare
CCNA_00675 +1.3 6.2 VapC-like PIN domain ribonuclease compare
CCNA_01926 +1.3 7.5 GGDEF diguanylate cyclase DgcB compare
CCNA_03464 +1.3 5.4 glycine cleavage system H protein compare
CCNA_00947 +1.3 10.7 flagellar hook protein FlgE compare
CCNA_03612 +1.3 9.8 HTH XRE-family transcriptional regulator compare
CCNA_02133 +1.3 6.5 glucokinase compare
CCNA_01763 +1.3 8.8 multifunctional aminopeptidase compare
CCNA_02805 +1.3 6.6 hypothetical protein compare
CCNA_00190 +1.3 1.1 acyl-CoA hydrolase compare
CCNA_02030 +1.3 4.3 hypothetical protein compare
CCNA_03132 +1.3 7.4 transcriptional regulator, antitoxin protein higA compare
CCNA_00527 +1.3 8.1 hypothetical protein compare
CCNA_00962 +1.3 8.6 MarR-family transcriptional regulator compare
CCNA_02447 +1.2 7.9 PspA/IM30 family regulatory protein compare
CCNA_00726 +1.2 9.6 acyl-CoA dehydrogenase compare
CCNA_01813 +1.2 8.5 tRNA-dihydrouridine synthase compare
CCNA_02156 +1.2 9.2 hypothetical protein compare
CCNA_02341 +1.2 9.5 small heat shock protein compare
CCNA_01678 +1.2 7.7 arginine N-succinyltransferase, beta chain compare
CCNA_01541 +1.2 8.9 LysR-family transcriptional regulator compare
CCNA_01433 +1.2 5.3 integration host factor alpha-subunit compare
CCNA_02576 +1.2 9.6 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_02976 +1.2 6.8 MCP-signal associated domain protein compare
CCNA_01780 +1.2 9.1 exopolyphosphatase compare
CCNA_02467 +1.2 8.7 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_00950 +1.2 10.1 flagellar M-ring protein FliF compare
CCNA_01059 +1.2 10.4 S-layer protein rsaA compare
CCNA_03964 +1.2 3.9 hypothetical protein compare
CCNA_01826 +1.2 8.3 vitamin B12 receptor compare
CCNA_02379 +1.2 8.2 hypothetical protein compare
CCNA_01339 +1.2 5.6 ArsR-family transcriptional regulator compare
CCNA_00443 +1.2 7.0 chemotaxis protein cheW compare
CCNA_00945 +1.2 7.8 chemotaxis protein MotD compare
CCNA_01193 +1.2 10.0 amylosucrase compare
CCNA_03893 +1.2 2.8 hypothetical protein compare
CCNA_00684 +1.2 4.3 anti-sigma factor, ChrR-family compare
CCNA_00946 +1.2 7.7 Basal-body rod modification protein FlgD compare
CCNA_03808 +1.2 8.7 organic solvent resistance transport system Ttg2C protein compare
CCNA_03214 +1.2 7.2 hypothetical protein compare
CCNA_00807 +1.2 3.2 ribonuclease P protein component compare
CCNA_00031 +1.2 7.4 toxin protein VapC compare
CCNA_01619 +1.2 8.2 NYN domain protein compare
CCNA_02330 +1.2 5.6 hypothetical protein compare
CCNA_02289 +1.2 8.3 MarR/EmrR family transcriptional regulator compare
CCNA_02242 +1.2 8.2 PHB granule-associated protein, phasin2 compare
CCNA_03910 +1.2 2.2 hypothetical protein compare
CCNA_03012 +1.2 9.8 peroxiredoxin compare
CCNA_02297 +1.2 5.8 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_03965 +1.2 2.1 hypothetical protein compare
CCNA_00322 +1.2 8.9 hypothetical protein compare
CCNA_01655 +1.2 7.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_00153 +1.1 2.9 adenine nucleotide exchange factor GrpE compare
CCNA_00400 +1.1 7.1 MarR/EmrR-family transcriptional regulator compare
CCNA_01583 +1.1 2.1 phosphate-binding protein compare
CCNA_01717 +1.1 5.8 hypothetical protein compare
CCNA_02171 +1.1 8.7 nucleoside permease nupC compare
CCNA_02553 +1.1 9.5 ATP-dependent clp protease ATP-binding subunit ClpA compare
CCNA_02067 +1.1 7.7 conserved membrane spanning protein compare
CCNA_02004 +1.1 2.8 SOS-induced inhibitor of cell division SidA compare
CCNA_02434 +1.1 5.0 hypothetical protein compare
CCNA_03105 +1.1 6.7 DnaJ domain protein compare
CCNA_01086 +1.1 7.9 GTP-binding protein lepA compare
CCNA_03515 +1.1 6.9 hypothetical protein compare
CCNA_02011 +1.1 7.1 methylmalonyl CoA epimerase compare
CCNA_00079 +1.1 5.5 MerR-family transcriptional regulator compare
CCNA_00507 +1.1 6.9 cytochrome c1 compare
CCNA_02419 +1.1 4.7 TonB1 protein compare
CCNA_01918 +1.1 7.7 cyclic di-GMP effector protein PopA compare
CCNA_03689 +1.1 9.0 alanine dehydrogenase compare
CCNA_01691 +1.1 6.6 tRNA/rRNA methyltransferase compare
CCNA_00998 +1.1 6.3 ROS/MUCR transcriptional regulator compare
CCNA_02552 +1.1 3.1 ATP-dependent Clp protease adaptor protein ClpS compare
CCNA_02534 +1.1 2.2 hypothetical protein compare
CCNA_02546 +1.1 8.0 GGDEF/response regulator protein PleD compare
CCNA_01453 +1.1 5.0 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_00682 +1.1 6.0 MarR-family transcriptional regulator compare
CCNA_02775 +1.1 3.5 hypothetical protein compare
CCNA_00448 +1.1 7.3 cheU protein compare
CCNA_01681 +1.1 6.6 RimI-like acetyltransferase compare
CCNA_02077 +1.1 3.5 5'(3')-nucleotidase/polyphosphatase SurE compare
CCNA_02037 +1.1 6.5 ATP-dependent endopeptidase Lon compare
CCNA_03420 +1.1 7.4 hypothetical protein compare
CCNA_01608 +1.1 5.4 TetR-family transcriptional regulator compare
CCNA_02728 +1.1 6.8 hypothetical protein compare
CCNA_02942 +1.1 3.5 nucleoside-diphosphate-sugar epimerase compare
CCNA_00440 +1.1 3.0 STAS domain protein compare
CCNA_00951 +1.1 7.5 flagellar motor switch protein FliG compare
CCNA_01393 +1.1 8.0 soluble lytic murein transglycosylase compare
CCNA_01025 +1.1 7.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in stress experiments

For stress Aluminum chloride hydrate across organisms