Experiment set4IT014 for Pedobacter sp. GW460-11-11-14-LB5

Compare to:

Lactitol 10mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
CA265_RS15895 +5.9 23.2 hypothetical protein compare
CA265_RS18235 +5.0 11.6 peptidase compare
CA265_RS23145 +4.4 14.7 hypothetical protein compare
CA265_RS14625 +3.5 23.7 hypothetical protein compare
CA265_RS15900 +3.0 1.8 hypothetical protein compare
CA265_RS18230 +2.7 5.0 two-component sensor histidine kinase compare
CA265_RS13695 +2.6 4.0 hypothetical protein compare
CA265_RS05725 +2.2 11.4 hypothetical protein compare
CA265_RS08905 +2.0 5.1 DNA helicase RecQ compare
CA265_RS05655 +1.9 12.6 hypothetical protein compare
CA265_RS04990 +1.9 6.6 short chain dehydrogenase compare
CA265_RS20355 +1.9 3.1 hypothetical protein compare
CA265_RS14550 +1.8 9.5 hypothetical protein compare
CA265_RS22790 +1.8 9.2 hypothetical protein compare
CA265_RS05620 +1.8 1.7 hypothetical protein compare
CA265_RS07455 +1.7 2.5 hypothetical protein compare
CA265_RS06595 +1.7 1.7 Arc family DNA binding domain-containing protein compare
CA265_RS02990 +1.6 9.0 mannosyltransferase compare
CA265_RS09725 +1.5 11.9 tolB protein precursor compare
CA265_RS10740 +1.5 6.0 DNA-binding response regulator compare
CA265_RS14125 +1.4 2.0 hypothetical protein compare
CA265_RS20465 +1.4 1.2 hypothetical protein compare
CA265_RS17690 +1.3 7.6 DNA-binding response regulator compare
CA265_RS16005 +1.3 4.6 hypothetical protein compare
CA265_RS17695 +1.3 6.1 hypothetical protein compare
CA265_RS05660 +1.3 6.6 DNA-binding response regulator compare
CA265_RS15270 +1.3 5.1 hypothetical protein compare
CA265_RS00650 +1.3 4.1 hypothetical protein compare
CA265_RS22395 +1.2 2.4 VOC family virulence protein compare
CA265_RS00815 +1.2 3.4 hypothetical protein compare
CA265_RS14745 +1.1 3.3 biopolymer transporter ExbD compare
CA265_RS19360 +1.1 5.2 peptidylprolyl isomerase compare
CA265_RS10305 +1.1 4.1 hypothetical protein compare
CA265_RS17720 +1.1 8.3 hypothetical protein compare
CA265_RS24895 +1.1 5.7 hypothetical protein compare
CA265_RS17225 +1.1 8.9 hypothetical protein compare
CA265_RS24355 +1.1 2.1 transcriptional regulator compare
CA265_RS22785 +1.1 3.6 hypothetical protein compare
CA265_RS21870 +1.1 4.8 DNA-binding response regulator compare
CA265_RS17330 +1.1 2.1 hypothetical protein compare
CA265_RS10745 +1.0 7.1 diguanylate cyclase compare
CA265_RS14935 +1.0 7.8 hypothetical protein compare
CA265_RS09740 +1.0 1.0 transcriptional regulator compare
CA265_RS06585 +1.0 5.4 hypothetical protein compare
CA265_RS19030 +1.0 5.2 hypothetical protein compare
CA265_RS19350 +1.0 5.3 ATP-dependent exodnase (exonuclease V) alpha subunit - helicase superfamily I member compare
CA265_RS04290 +1.0 2.3 hypothetical protein compare
CA265_RS09415 +1.0 0.6 hypothetical protein compare
CA265_RS18125 +1.0 5.3 gliding motility protein GldL compare
CA265_RS13970 +1.0 7.1 hypothetical protein compare
CA265_RS22805 +1.0 5.2 glycosyl transferase compare
CA265_RS00585 +0.9 7.6 translocation/assembly module TamB compare
CA265_RS00570 +0.9 2.5 hypothetical protein compare
CA265_RS14665 +0.9 6.1 hypothetical protein compare
CA265_RS04635 +0.9 6.8 CusA/CzcA family heavy metal efflux RND transporter compare
CA265_RS25275 +0.9 3.4 TIGR00159 family protein compare
CA265_RS08880 +0.9 5.7 chromate transporter compare
CA265_RS16615 +0.9 1.2 hypothetical protein compare
CA265_RS20070 +0.9 3.8 NadR compare
CA265_RS20490 +0.9 5.7 hypothetical protein compare
CA265_RS20495 +0.9 4.4 hypothetical protein compare
CA265_RS24995 +0.9 2.7 hypothetical protein compare
CA265_RS22820 +0.9 4.3 flagellar motor protein MotB compare
CA265_RS03735 +0.9 3.2 hypothetical protein compare
CA265_RS06365 +0.9 6.7 hypothetical protein compare
CA265_RS07470 +0.9 2.0 hypothetical protein compare
CA265_RS08655 +0.9 1.7 glyoxalase family protein compare
CA265_RS15720 +0.9 3.6 hypothetical protein compare
CA265_RS17710 +0.9 4.5 hypothetical protein compare
CA265_RS16295 +0.8 4.7 LacI family transcriptional regulator compare
CA265_RS18120 +0.8 6.1 gliding motility protein GldM compare
CA265_RS20480 +0.8 4.8 restriction endonuclease subunit S compare
CA265_RS23190 +0.8 1.6 transcription elongation factor GreA compare
CA265_RS13240 +0.8 1.8 preprotein translocase subunit YajC compare
CA265_RS03290 +0.8 3.9 gliding motility-associated ABC transporter permease subunit GldF compare
CA265_RS20485 +0.8 4.4 hypothetical protein compare
CA265_RS23985 +0.8 3.8 gliding motility lipoprotein GldB compare
CA265_RS25305 +0.8 1.9 hypothetical protein compare
CA265_RS04655 +0.8 3.3 DNA-binding response regulator compare
CA265_RS04640 +0.8 3.2 efflux transporter periplasmic adaptor subunit compare
CA265_RS18865 +0.8 3.0 hypothetical protein compare
CA265_RS20880 +0.8 2.7 hypothetical protein compare
CA265_RS23960 +0.8 1.0 glycine cleavage system protein T compare
CA265_RS21365 +0.8 1.3 thiol reductase thioredoxin compare
CA265_RS06900 +0.8 1.8 hypothetical protein compare
CA265_RS17705 +0.8 5.5 hypothetical protein compare
CA265_RS21315 +0.8 2.9 hypothetical protein compare
CA265_RS07330 +0.8 2.2 hypothetical protein compare
CA265_RS19500 +0.8 3.5 methyltransferase type 11 compare
CA265_RS19810 +0.8 1.8 hypothetical protein compare
CA265_RS23635 +0.8 5.4 gliding motility lipoprotein GldJ compare
CA265_RS12280 +0.8 1.2 hypothetical protein compare
CA265_RS02965 +0.8 2.1 hypothetical protein compare
CA265_RS22640 +0.8 3.1 chloride channel protein compare
CA265_RS06265 +0.8 1.1 cold-shock protein compare
CA265_RS12100 +0.8 3.6 hypothetical protein compare
CA265_RS05350 +0.8 3.8 hypothetical protein compare
CA265_RS17715 +0.8 7.0 hypothetical protein compare
CA265_RS13265 +0.8 2.6 DNA-binding protein compare
CA265_RS17635 +0.8 2.2 hypothetical protein compare
CA265_RS20585 +0.8 1.2 hypothetical protein compare
CA265_RS17440 +0.7 5.4 Fis family transcriptional regulator compare
CA265_RS18035 +0.7 2.3 hypothetical protein compare
CA265_RS14925 +0.7 1.5 hypothetical protein compare
CA265_RS15910 +0.7 3.7 hypothetical protein compare
CA265_RS15070 +0.7 2.6 hypothetical protein compare
CA265_RS12825 +0.7 2.0 hypothetical protein compare
CA265_RS22965 +0.7 1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
CA265_RS09560 +0.7 4.6 galactose-1-epimerase compare
CA265_RS23030 +0.7 1.4 serine protease compare
CA265_RS16785 +0.7 1.0 50S ribosomal protein L17 compare
CA265_RS15415 +0.7 3.3 GNAT family N-acetyltransferase compare
CA265_RS14530 +0.7 1.6 nicotinate-nucleotide diphosphorylase (carboxylating) compare
CA265_RS07520 +0.7 3.3 cation diffusion facilitator family transporter compare
CA265_RS17685 +0.7 4.0 hypothetical protein compare
CA265_RS06995 +0.7 3.2 hypothetical protein compare
CA265_RS19460 +0.7 2.1 uracil phosphoribosyltransferase compare
CA265_RS25260 +0.7 1.8 hypothetical protein compare
CA265_RS07440 +0.7 2.5 hypothetical protein compare
CA265_RS02100 +0.7 2.2 hypothetical protein compare
CA265_RS02315 +0.7 2.5 single-stranded DNA-binding protein compare
CA265_RS03260 +0.7 3.8 multidrug ABC transporter ATP-binding protein compare
CA265_RS20350 +0.7 2.4 gliding motility lipoprotein GldH compare
CA265_RS00335 +0.7 1.3 hypothetical protein compare
CA265_RS22690 +0.7 3.7 hypothetical protein compare
CA265_RS24230 +0.7 3.6 RNA polymerase sigma factor compare
CA265_RS18090 +0.7 5.4 gliding motility protein compare
CA265_RS15905 +0.7 3.0 RNA polymerase sigma factor compare
CA265_RS21675 +0.7 3.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
CA265_RS22450 +0.7 1.6 GntR family transcriptional regulator compare
CA265_RS13245 +0.7 2.6 hypothetical protein compare
CA265_RS14740 +0.7 2.8 biopolymer transporter ExbB compare
CA265_RS03400 +0.7 1.4 hypothetical protein compare
CA265_RS15760 +0.7 1.8 peroxiredoxin compare
CA265_RS16390 +0.7 2.9 polysaccharide deacetylase family protein compare
CA265_RS21195 +0.7 4.2 hypothetical protein compare
CA265_RS13935 +0.7 2.6 DNA-binding response regulator compare
CA265_RS01355 +0.7 2.8 hypothetical protein compare
CA265_RS16550 +0.7 1.8 acyl carrier protein compare
CA265_RS10910 +0.7 4.5 iron/manganese transporter compare
CA265_RS10645 +0.7 1.1 II family cellulose-binding protein compare
CA265_RS04650 +0.6 3.5 two-component sensor histidine kinase compare
CA265_RS12745 +0.6 1.7 NUDIX hydrolase compare
CA265_RS07245 +0.6 1.7 hypothetical protein compare
CA265_RS19935 +0.6 2.1 hypothetical protein compare
CA265_RS19740 +0.6 2.3 gliding motility lipoprotein GldD compare
CA265_RS18200 +0.6 1.6 DUF4440 domain-containing protein compare
CA265_RS05365 +0.6 2.9 hypothetical protein compare
CA265_RS23800 +0.6 2.0 methyltransferase type 12 compare
CA265_RS23275 +0.6 1.3 alpha/beta hydrolase compare
CA265_RS14350 +0.6 1.8 hypothetical protein compare
CA265_RS08665 +0.6 0.8 tRNA-Lys compare
CA265_RS06360 +0.6 4.2 hypothetical protein compare
CA265_RS09705 +0.6 2.0 copper oxidase compare
CA265_RS19800 +0.6 2.3 GLPGLI family protein compare
CA265_RS20650 +0.6 0.5 hypothetical protein compare
CA265_RS20805 +0.6 1.9 methyltransferase compare
CA265_RS18335 +0.6 2.4 sulfurtransferase compare
CA265_RS00885 +0.6 1.6 hypothetical protein compare
CA265_RS00160 +0.6 1.8 hypothetical protein compare
CA265_RS08755 +0.6 2.4 response regulator compare
CA265_RS16395 +0.6 2.0 hypothetical protein compare
CA265_RS21965 +0.6 2.6 hypothetical protein compare
CA265_RS02200 +0.6 2.6 NUDIX hydrolase compare
CA265_RS14670 +0.6 3.3 hypothetical protein compare
CA265_RS16820 +0.6 1.5 type I methionyl aminopeptidase compare
CA265_RS01785 +0.6 2.3 hypothetical protein compare
CA265_RS12450 +0.6 1.6 endonuclease/exonuclease/phosphatase compare
CA265_RS05515 +0.6 1.4 hypothetical protein compare
CA265_RS18555 +0.6 0.9 hypothetical protein compare
CA265_RS24480 +0.6 1.0 hypothetical protein compare
CA265_RS11620 +0.6 4.0 sterol desaturase compare
CA265_RS24610 +0.6 1.9 DNA polymerase IV compare
CA265_RS24045 +0.6 2.4 SIMPL domain-containing protein compare
CA265_RS07620 +0.6 1.9 hypothetical protein compare
CA265_RS06065 +0.6 3.0 family 88 glycosyl hydrolase compare
CA265_RS08830 +0.6 2.8 hypothetical protein compare
CA265_RS06990 +0.6 2.4 hypothetical protein compare
CA265_RS07120 +0.6 1.2 glutathione peroxidase compare
CA265_RS03525 +0.6 1.1 hypothetical protein compare
CA265_RS05645 +0.6 2.1 hypothetical protein compare
CA265_RS20215 +0.6 1.3 transcriptional regulator compare
CA265_RS18130 +0.6 4.0 gliding motility-associated lipoprotein compare
CA265_RS04875 +0.6 2.4 LysR family transcriptional regulator compare
CA265_RS21060 +0.6 1.5 hypothetical protein compare
CA265_RS23225 +0.6 1.7 transcriptional regulator compare
CA265_RS04645 +0.6 3.6 cation transporter compare
CA265_RS21010 +0.6 2.2 hypothetical protein compare
CA265_RS21960 +0.6 1.7 hypothetical protein compare
CA265_RS13175 +0.6 0.5 hypothetical protein compare
CA265_RS19570 +0.6 2.9 capsule biosynthesis protein CapA compare
CA265_RS12600 +0.6 1.0 hypothetical protein compare
CA265_RS03665 +0.5 1.4 hypothetical protein compare
CA265_RS20750 +0.5 0.8 hypothetical protein compare
CA265_RS24445 +0.5 1.4 hypothetical protein compare
CA265_RS18115 +0.5 2.3 gliding motility protein GldN compare
CA265_RS25335 +0.5 0.8 hypothetical protein compare
CA265_RS14940 +0.5 1.1 hypothetical protein compare
CA265_RS10390 +0.5 1.2 hypothetical protein compare
CA265_RS09420 +0.5 0.7 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Lactitol in Pedobacter sp. GW460-11-11-14-LB5

For carbon source Lactitol across organisms