Experiment set4IT013 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -6.1 -4.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_3008 -4.7 -9.8 Undecaprenyl-diphosphatase compare
Psyr_1544 -4.4 -4.3 SirA-like protein compare
Psyr_4340 -4.0 -9.7 phosphomethylpyrimidine kinase, putative compare
Psyr_4740 -4.0 -8.9 thiazole-phosphate synthase compare
Psyr_1613 -3.7 -6.1 septum site-determining protein MinC compare
Psyr_4684 -3.7 -3.5 biotin synthesis protein BioC compare
Psyr_4341 -3.7 -9.7 thiamine-phosphate diphosphorylase compare
Psyr_0565 -3.3 -7.6 Protein of unknown function UPF0126 compare
Psyr_4686 -3.2 -7.2 8-amino-7-oxononanoate synthase compare
Psyr_4687 -3.0 -9.5 biotin synthase compare
Psyr_0454 -2.7 -7.0 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_2080 -2.6 -9.9 aminodeoxychorismate synthase, subunit I compare
Psyr_1373 -2.6 -4.1 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4683 -2.5 -5.5 dethiobiotin synthase compare
Psyr_4091 -2.5 -4.3 8-oxo-dGTPase compare
Psyr_1121 -2.4 -2.9 6-phosphogluconolactonase compare
Psyr_0917 -2.4 -11.3 ABC-2 compare
Psyr_0831 -2.4 -4.4 Two-component response regulator CbrB compare
Psyr_0918 -2.3 -12.3 ABC transporter compare
Psyr_0849 -2.3 -11.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4754 -2.2 -3.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_1650 -2.2 -5.1 aminodeoxychorismate lyase apoprotein compare
Psyr_0826 -2.2 -8.1 glucose-6-phosphate isomerase compare
Psyr_0531 -2.0 -2.3 LmbE-like protein compare
Psyr_4622 -2.0 -6.0 Nucleotidyl transferase compare
Psyr_4627 -2.0 -3.5 dimethyladenosine transferase compare
Psyr_0259 -1.9 -4.4 Osmolarity sensor protein envZ compare
Psyr_4991 -1.8 -3.3 hypothetical protein compare
Psyr_2854 -1.8 -6.2 conserved hypothetical protein compare
Psyr_4581 -1.7 -3.3 anthranilate synthase, component II compare
Psyr_5133 -1.7 -4.8 tRNA modification GTPase trmE compare
Psyr_4203 -1.7 -2.1 SsrA-binding protein compare
Psyr_0377 -1.6 -6.7 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1556 -1.6 -2.4 hypothetical protein compare
Psyr_3954 -1.6 -4.5 GTP-binding protein LepA compare
Psyr_3198 -1.6 -3.0 NADH dehydrogenase subunit B compare
Psyr_2980 -1.5 -3.3 UDP-glucose pyrophosphorylase compare
Psyr_1227 -1.5 -3.3 Queuosine biosynthesis protein compare
Psyr_0487 -1.5 -3.3 glutathione synthase compare
Psyr_0529 -1.4 -4.9 Glycosyl transferase, group 1 compare
Psyr_1748 -1.4 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0303 -1.4 -2.2 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_4893 -1.4 -3.0 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_0475 -1.4 -3.7 Protein of unknown function YGGT compare
Psyr_4460 -1.3 -2.5 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1410 -1.3 -4.5 Holliday junction DNA helicase RuvB compare
Psyr_1408 -1.3 -2.9 Holliday junction endonuclease RuvC compare
Psyr_0378 -1.3 -7.5 Glycosyl transferase, family 2 compare
Psyr_2855 -1.3 -2.9 methionine synthase (B12-independent) compare
Psyr_4140 -1.3 -2.0 Protein of unknown function DUF140 compare
Psyr_4822 -1.3 -3.5 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0976 -1.3 -4.7 Malate:quinone-oxidoreductase compare
Psyr_3193 -1.3 -2.3 Transcription factor jumonji, jmjC compare
Psyr_1907 -1.2 -2.2 GTP cyclohydrolase I compare
Psyr_3701 -1.2 -2.9 thioredoxin, putative compare
Psyr_3262 -1.2 -1.5 dnaK suppressor protein, putative compare
Psyr_1751 -1.2 -4.3 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4424 -1.2 -6.4 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4294 -1.1 -3.8 Histone deacetylase family protein compare
Psyr_1910 -1.1 -4.6 VacJ-like lipoprotein compare
Psyr_1371 -1.1 -5.3 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_0532 -1.1 -4.8 conserved hypothetical protein compare
Psyr_1108 -1.1 -6.1 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_4843 -1.1 -4.5 NUDIX hydrolase compare
Psyr_3581 -1.1 -4.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_3808 -1.1 -2.5 hypothetical protein compare
Psyr_1749 -1.1 -5.3 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0832 -1.0 -6.2 Two-component sensor kinase CbrA compare
Psyr_3199 -1.0 -2.4 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0817 -1.0 -3.1 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_4407 -1.0 -1.6 phosphoribosylamine--glycine ligase compare
Psyr_1816 -1.0 -2.8 transcriptional regulator, GntR family compare
Psyr_3179 -1.0 -2.7 DNA translocase FtsK compare
Psyr_2285 -1.0 -1.5 Twin-arginine translocation pathway signal compare
Psyr_0579 -1.0 -6.6 RNAse R compare
Psyr_0393 -1.0 -3.6 Protein of unknown function DUF971 compare
Psyr_0373 -1.0 -2.5 CDS compare
Psyr_4408 -1.0 -5.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4015 -1.0 -2.5 conserved domain protein compare
Psyr_3146 -1.0 -1.2 general secretion pathway protein J, putative compare
Psyr_0060 -1.0 -4.5 Protein of unknown function DUF513 compare
Psyr_0491 -1.0 -2.7 chemotaxis sensory transducer compare
Psyr_RNA28 -1.0 -1.3 tRNA-Val compare
Psyr_3932 -0.9 -1.6 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4141 -0.9 -4.2 ABC transporter compare
Psyr_4940 -0.9 -2.2 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_5135 -0.9 -1.2 Protein of unknown function DUF37 compare
Psyr_3287 -0.9 -2.1 DNA topoisomerase I compare
Psyr_4623 -0.9 -6.4 Aminoglycoside phosphotransferase compare
Psyr_0822 -0.9 -1.0 1-phosphofructokinase compare
Psyr_0724 -0.9 -2.6 conserved hypothetical protein compare
Psyr_4316 -0.9 -2.9 conserved hypothetical protein compare
Psyr_0034 -0.9 -2.8 tryptophan synthase, beta chain compare
Psyr_4830 -0.9 -1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1864 -0.9 -3.5 spermidine synthase compare
Psyr_3691 -0.9 -4.5 conserved hypothetical protein compare
Psyr_0927 -0.9 -3.0 hypothetical protein compare
Psyr_3905 -0.9 -4.3 glycerol kinase compare
Psyr_2196 -0.9 -2.1 Urease accessory protein UreG compare
Psyr_0729 -0.9 -3.5 CDS compare
Psyr_2144 -0.9 -2.1 conserved hypothetical protein compare
Psyr_4750 -0.9 -2.1 cell division ATP-binding protein FtsE compare
Psyr_0827 -0.9 -3.1 pantothenate synthetase compare
Psyr_2383 -0.9 -2.0 Protein of unknown function DUF72 compare
Psyr_3202 -0.9 -1.5 NADH dehydrogenase subunit G compare
Psyr_1638 -0.8 -2.5 RNAse E compare
Psyr_4089 -0.8 -3.7 PAS compare
Psyr_0014 -0.8 -2.9 lipid A biosynthesis acyltransferase compare
Psyr_2360 -0.8 -1.5 CBS compare
Psyr_0571 -0.8 -2.8 tRNA isopentenyltransferase compare
Psyr_4194 -0.8 -2.7 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0920 -0.8 -6.6 Glycosyl transferase, group 1 compare
Psyr_3337 -0.8 -1.8 gluconate kinase, SKI family compare
Psyr_3419 -0.8 -3.2 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2095 -0.8 -2.9 Conserved TM helix compare
Psyr_1269 -0.8 -2.4 phosphoribosylformylglycinamidine synthase compare
Psyr_0574 -0.8 -3.3 protease FtsH subunit HflK compare
Psyr_2088 -0.8 -1.4 2-methylaconitate cis-trans isomerase compare
Psyr_3258 -0.8 -2.0 conserved hypothetical protein compare
Psyr_0524 -0.7 -2.8 Lipopolysaccharide kinase compare
Psyr_1667 -0.7 -3.4 Colicin V production protein compare
Psyr_1614 -0.7 -2.7 lipid A biosynthesis acyltransferase compare
Psyr_2897 -0.7 -3.6 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2804 -0.7 -2.7 hypothetical protein compare
Psyr_4673 -0.7 -2.0 Coenzyme PQQ synthesis D compare
Psyr_4393 -0.7 -2.5 type II secretion system protein E compare
Psyr_0137 -0.7 -1.5 outer membrane transport energization protein ExbD compare
Psyr_1547 -0.7 -3.0 glycine cleavage system transcriptional repressor compare
Psyr_0549 -0.7 -1.5 Metallophosphoesterase compare
Psyr_2067 -0.7 -1.9 ABC transporter compare
Psyr_4601 -0.7 -2.1 hypothetical protein compare
Psyr_0746 -0.7 -3.0 IS66 Orf2 like protein compare
Psyr_0726 -0.7 -2.8 ribosomal large subunit pseudouridine synthase D compare
Psyr_1317 -0.7 -1.5 conserved hypothetical protein compare
Psyr_5067 -0.7 -3.1 conserved hypothetical protein compare
Psyr_4842 -0.7 -3.5 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2292 -0.7 -1.7 L-glutaminase compare
Psyr_4788 -0.7 -1.5 lipoprotein, putative compare
Psyr_3213 -0.7 -2.3 Propeptide, PepSY amd peptidase M4 compare
Psyr_1807 -0.7 -2.2 Allantoicase compare
Psyr_4143 -0.7 -1.9 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2502 -0.7 -2.1 conserved hypothetical protein compare
Psyr_4078 -0.7 -5.1 AmpG-related permease compare
Psyr_3294 -0.7 -3.1 ABC transporter compare
Psyr_3637 -0.7 -4.8 Glycosyl transferase, family 4 compare
Psyr_1417 -0.7 -3.2 TPR repeat protein compare
Psyr_2270 -0.7 -2.2 transferase hexapeptide repeat protein compare
Psyr_4362 -0.7 -1.6 Rare lipoprotein A compare
Psyr_2471 -0.7 -1.2 hydroxymethylglutaryl-CoA lyase compare
Psyr_4029 -0.7 -3.7 pyruvate kinase compare
Psyr_4051 -0.7 -1.7 transcriptional regulator, ArsR family compare
Psyr_2802 -0.7 -1.8 lipoprotein, putative compare
Psyr_2826 -0.7 -2.6 hypothetical protein compare
Psyr_5065 -0.7 -3.6 ATP-dependent DNA helicase UvrD compare
Psyr_2642 -0.7 -2.6 hypothetical protein compare
Psyr_5132 -0.7 -1.2 Glucose-inhibited division protein A subfamily compare
Psyr_0255 -0.7 -1.3 glutamate-cysteine ligase compare
Psyr_0936 -0.7 -4.5 Glycosyl transferase, group 1 compare
Psyr_4682 -0.7 -1.8 conserved hypothetical protein compare
Psyr_0835 -0.6 -3.0 transcriptional regulator, TraR/DksA family compare
Psyr_1522 -0.6 -3.2 Single-strand binding protein compare
Psyr_1780 -0.6 -1.5 transcriptional regulator, TetR family compare
Psyr_3282 -0.6 -2.7 transcriptional regulator, TetR family compare
Psyr_1678 -0.6 -1.0 Hypothetical protein compare
Psyr_3567 -0.6 -1.3 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_2779 -0.6 -1.0 Phage minor tail compare
Psyr_0295 -0.6 -1.9 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1022 -0.6 -1.2 conserved hypothetical protein compare
Psyr_1855 -0.6 -2.8 methylthioribulose-1-phosphate dehydratase compare
Psyr_0239 -0.6 -2.5 cytochrome c5 compare
Psyr_4887 -0.6 -4.3 Peptidase S41A, C-terminal protease compare
Psyr_1843 -0.6 -2.0 Protein of unknown function DUF1311 compare
Psyr_1138 -0.6 -1.5 GCN5-related N-acetyltransferase compare
Psyr_0788 -0.6 -2.0 Response regulator receiver compare
Psyr_3081 -0.6 -1.7 Secretion protein HlyD compare
Psyr_4416 -0.6 -2.1 precorrin-8X methylmutase compare
Psyr_3522 -0.6 -3.1 L-serine ammonia-lyase compare
Psyr_3585 -0.6 -1.3 Sua5/YciO/YrdC/YwlC compare
Psyr_1462 -0.6 -2.8 GCN5-related N-acetyltransferase compare
Psyr_1251 -0.6 -1.6 quinoprotein compare
Psyr_1935 -0.6 -2.6 Protein of unknown function DUF796 compare
Psyr_3807 -0.6 -3.2 hypothetical protein compare
Psyr_0919 -0.6 -4.2 Chromosome segregation ATPase-like protein compare
Psyr_2927 -0.6 -1.2 transcriptional regulator, TetR family compare
Psyr_2974 -0.6 -3.2 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
Psyr_4361 -0.6 -1.9 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_4019 -0.6 -2.3 H-NS family protein MvaT compare
Psyr_1097 -0.6 -1.1 glycine cleavage system H protein compare
Psyr_3665 -0.6 -1.4 conserved hypothetical protein compare
Psyr_4512 -0.6 -2.4 putative phage-related protein compare
Psyr_1930 -0.6 -2.0 hypothetical protein compare
Psyr_3020 -0.6 -1.4 precorrin-4 C11-methyltransferase compare
Psyr_1505 -0.6 -2.1 Protein of unknown function DUF156 compare
Psyr_0533 -0.6 -2.7 conserved hypothetical protein compare
Psyr_1196 -0.6 -1.4 type III secretion protein HrpD compare
Psyr_3342 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0033 -0.6 -1.5 tryptophan synthase, alpha chain compare
Psyr_2921 -0.6 -1.1 ADP-ribosylglycohydrolase compare
Psyr_2733 -0.6 -1.5 Short-chain dehydrogenase/reductase SDR compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in kb experiments