Experiment set4IT009 for Methanococcus maripaludis S2

Compare to:

H2 deepwell casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03620 +1.9 12.9 hypothetical protein compare
MMP_RS03615 +1.8 12.0 4Fe-4S binding protein compare
MMP_RS07890 +1.2 4.0 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS04550 +1.1 8.5 S-layer protein compare
MMP_RS07860 +1.0 0.9 hypothetical protein compare
MMP_RS09025 +1.0 1.6 hypothetical protein compare
MMP_RS01865 +1.0 2.1 GPR1/FUN34/YaaH family transporter compare
MMP_RS05355 +0.9 1.1 hypothetical protein compare
MMP_RS08315 +0.8 1.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS08090 +0.7 2.8 hypothetical protein compare
MMP_RS00240 +0.7 4.6 type II secretion system F family protein compare
MMP_RS07815 +0.7 1.2 DUF2120 domain-containing protein compare
MMP_RS06365 +0.7 2.2 hypothetical protein compare
MMP_RS06910 +0.7 4.1 RlmF-related methyltransferase compare
MMP_RS02915 +0.7 3.1 amino acid ABC transporter permease compare
MMP_RS02490 +0.6 2.7 hypothetical protein compare
MMP_RS06070 +0.6 4.5 iron ABC transporter substrate-binding protein compare
MMP_RS04520 +0.6 1.6 nucleoside deaminase compare
MMP_RS02265 +0.6 2.0 nitroreductase family protein compare
MMP_RS00395 +0.6 1.3 MGMT family protein compare
MMP_RS08620 +0.6 2.8 flagellar accessory protein FlaH compare
MMP_RS03300 +0.6 0.7 TOBE domain-containing protein compare
MMP_RS01055 +0.6 2.4 hypothetical protein compare
MMP_RS07895 +0.6 1.7 cytochrome c compare
MMP_RS08275 +0.6 3.5 hypothetical protein compare
MMP_RS01310 +0.5 4.1 hypothetical protein compare
MMP_RS02475 +0.5 1.7 hypothetical protein compare
MMP_RS06530 +0.5 2.6 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS03490 +0.5 1.1 DUF2115 domain-containing protein compare
MMP_RS08855 +0.5 2.5 hypothetical protein compare
MMP_RS08555 +0.5 1.5 hypothetical protein compare
MMP_RS08860 +0.5 2.1 MinD/ParA family protein compare
MMP_RS08670 +0.5 2.3 metallophosphoesterase compare
MMP_RS07885 +0.5 2.0 tripartite tricarboxylate transporter permease compare
MMP_RS08675 +0.5 1.6 class III signal peptide-containing protein compare
MMP_RS08930 +0.5 1.1 hypothetical protein compare
MMP_RS01130 +0.5 2.8 flavoprotein compare
MMP_RS03520 +0.5 0.8 YwbE family protein compare
MMP_RS07125 +0.5 1.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00125 +0.5 1.0 DUF2798 domain-containing protein compare
MMP_RS08130 +0.5 3.1 IGHMBP2 family helicase compare
MMP_RS08775 +0.5 1.8 methanogenesis marker 9 domain-containing protein compare
MMP_RS00990 +0.4 1.1 hypothetical protein compare
MMP_RS01180 +0.4 0.9 XTP/dITP diphosphatase compare
MMP_RS06175 +0.4 1.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS05835 +0.4 0.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04985 +0.4 1.2 DUF2180 family protein compare
MMP_RS07770 +0.4 1.8 alanine racemase compare
MMP_RS00960 +0.4 1.4 iron export ABC transporter permease subunit FetB compare
MMP_RS08260 +0.4 2.5 DUF99 family protein compare
MMP_RS01750 +0.4 2.9 DUF63 family protein compare
MMP_RS03965 +0.4 1.2 hypothetical protein compare
MMP_RS00950 +0.4 2.3 site-2 protease family protein compare
MMP_RS07650 +0.4 2.9 TldD/PmbA family protein compare
MMP_RS02310 +0.4 0.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS02605 +0.4 0.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08200 +0.4 2.6 archaeosine synthase subunit alpha compare
MMP_RS04145 +0.4 0.8 hypothetical protein compare
MMP_RS07840 +0.4 1.0 ribonuclease III compare
MMP_RS01155 +0.4 1.6 XRE family transcriptional regulator compare
MMP_RS00280 +0.4 2.3 DUF2118 domain-containing protein compare
MMP_RS06440 +0.4 1.9 CBS domain-containing protein compare
MMP_RS00140 +0.4 1.0 DUF192 domain-containing protein compare
MMP_RS02650 +0.4 1.6 flavodoxin family protein compare
MMP_RS08580 +0.4 2.0 flagellin compare
MMP_RS06905 +0.4 0.9 hypothetical protein compare
MMP_RS01650 +0.4 0.5 sulfurtransferase TusA family protein compare
MMP_RS07905 +0.4 1.4 DUF3343 domain-containing protein compare
MMP_RS00245 +0.4 2.9 type II secretion system F family protein compare
MMP_RS07095 +0.4 0.6 PspC domain-containing protein compare
MMP_RS08625 +0.4 2.4 type II/IV secretion system ATPase subunit compare
MMP_RS06150 +0.4 1.9 hypothetical protein compare
MMP_RS06000 +0.4 1.3 divalent-cation tolerance protein CutA compare
MMP_RS06500 +0.4 2.0 ATP-binding protein compare
MMP_RS01285 +0.4 2.0 hypothetical protein compare
MMP_RS08610 +0.4 1.9 flagellar protein F compare
MMP_RS08755 +0.4 2.5 sodium:solute symporter family protein compare
MMP_RS01980 +0.3 2.5 trimeric intracellular cation channel family protein compare
MMP_RS01165 +0.3 1.7 DUF434 domain-containing protein compare
MMP_RS07130 +0.3 1.9 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS00635 +0.3 1.7 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS08665 +0.3 2.8 hypothetical protein compare
MMP_RS06335 +0.3 1.7 HAD family hydrolase compare
MMP_RS04795 +0.3 1.5 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY compare
MMP_RS08640 +0.3 1.6 TIM barrel protein compare
MMP_RS06585 +0.3 0.7 DMT family protein compare
MMP_RS05635 +0.3 2.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05825 +0.3 1.0 peptidyl-prolyl cis-trans isomerase compare
MMP_RS00825 +0.3 0.8 fumarylacetoacetate hydrolase family protein compare
MMP_RS00185 +0.3 2.3 potassium channel protein compare
MMP_RS09065 +0.3 2.5 hypothetical protein compare
MMP_RS02480 +0.3 0.5 hypothetical protein compare
MMP_RS02675 +0.3 0.8 hypothetical protein compare
MMP_RS01290 +0.3 2.2 class III signal peptide-containing protein compare
MMP_RS03875 +0.3 1.2 hypothetical protein compare
MMP_RS04840 +0.3 2.0 response regulator compare
MMP_RS01515 +0.3 2.1 PINc/VapC family ATPase compare
MMP_RS00080 +0.3 1.2 RecB-family nuclease compare
MMP_RS05715 +0.3 1.6 hypothetical protein compare
MMP_RS01295 +0.3 1.9 hypothetical protein compare
MMP_RS07330 +0.3 2.7 membrane protein compare
MMP_RS07120 +0.3 1.6 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08850 +0.3 2.4 hypothetical protein compare
MMP_RS08400 +0.3 0.5 MJ0307 family thioredoxin compare
MMP_RS08215 +0.3 0.7 DUF483 domain-containing protein compare
MMP_RS08285 +0.3 1.6 serine/threonine protein kinase compare
MMP_RS07560 +0.3 1.5 prefoldin subunit alpha compare
MMP_RS01620 +0.3 1.5 hypothetical protein compare
MMP_RS03740 +0.3 1.8 indolepyruvate oxidoreductase subunit beta compare
MMP_RS02765 +0.3 1.3 ABC transporter ATP-binding protein compare
MMP_RS08630 +0.3 1.6 archaellar assembly protein FlaJ compare
MMP_RS08205 +0.3 1.6 stage II sporulation protein M compare
MMP_RS08385 +0.3 1.5 ABC transporter substrate-binding protein compare
MMP_RS03020 +0.3 0.9 peptidylprolyl isomerase compare
MMP_RS00955 +0.3 1.9 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS02795 +0.3 1.6 sulfate permease compare
MMP_RS05615 +0.3 2.0 radical SAM protein compare
MMP_RS01305 +0.3 2.3 hypothetical protein compare
MMP_RS04675 +0.3 1.8 selenouridine synthase SelU-like subunit compare
MMP_RS05980 +0.3 1.5 ferritin compare
MMP_RS05140 +0.3 0.6 helix-turn-helix transcriptional regulator compare
MMP_RS00700 +0.3 1.3 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00935 +0.3 1.7 MATE family efflux transporter compare
MMP_RS04965 +0.3 1.8 thioredoxin family protein compare
MMP_RS04285 +0.3 1.5 Ni/Fe hydrogenase subunit alpha compare
MMP_RS00660 +0.3 1.6 alkaline phosphatase family protein compare
MMP_RS06525 +0.3 0.4 YciI family protein compare
MMP_RS06550 +0.3 1.6 AMP-binding protein compare
MMP_RS06875 +0.3 1.2 FAD-dependent oxidoreductase compare
MMP_RS04060 +0.3 1.1 hypothetical protein compare
MMP_RS01940 +0.3 1.0 MoxR family ATPase compare
MMP_RS03840 +0.3 1.1 hypothetical protein compare
MMP_RS06765 +0.3 1.3 flap endonuclease-1 compare
MMP_RS07155 +0.3 1.6 MFS transporter compare
MMP_RS06055 +0.3 1.4 peroxiredoxin compare
MMP_RS01785 +0.3 1.7 hypothetical protein compare
MMP_RS01315 +0.3 2.3 DUF2341 domain-containing protein compare
MMP_RS04610 +0.3 0.6 Dabb family protein compare
MMP_RS06060 +0.3 1.6 hypothetical protein compare
MMP_RS02705 +0.3 1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05720 +0.3 0.8 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS08770 +0.3 1.4 hypothetical protein compare
MMP_RS08225 +0.3 1.4 RimK family alpha-L-glutamate ligase compare
MMP_RS06610 +0.3 0.9 DUF2334 domain-containing protein compare
MMP_RS02415 +0.3 0.7 site-specific integrase compare
MMP_RS02315 +0.2 1.5 RimK family alpha-L-glutamate ligase compare
MMP_RS03090 +0.2 1.4 cation:proton antiporter compare
MMP_RS06480 +0.2 0.8 ABC transporter substrate-binding protein compare
MMP_RS00445 +0.2 1.5 7-carboxy-7-deazaguanine synthase QueE compare
MMP_RS02405 +0.2 1.4 hypothetical protein compare
MMP_RS02645 +0.2 1.1 ArsR family transcriptional regulator compare
MMP_RS08160 +0.2 0.9 EamA family transporter compare
MMP_RS00250 +0.2 1.9 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00905 +0.2 1.0 phenylacetate--CoA ligase compare
MMP_RS00235 +0.2 1.3 HDIG domain-containing protein compare
MMP_RS02725 +0.2 1.4 molybdate ABC transporter permease subunit compare
MMP_RS01280 +0.2 1.9 DUF515 domain-containing protein compare
MMP_RS01930 +0.2 1.9 hypothetical protein compare
MMP_RS05175 +0.2 0.8 hypothetical protein compare
MMP_RS01430 +0.2 1.4 mechanosensitive ion channel family protein compare
MMP_RS05560 +0.2 1.0 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMP_RS00945 +0.2 0.4 PadR family transcriptional regulator compare
MMP_RS07915 +0.2 1.0 DUF4870 domain-containing protein compare
MMP_RS07855 +0.2 1.1 class I SAM-dependent methyltransferase compare
MMP_RS05790 +0.2 1.0 HDIG domain-containing protein compare
MMP_RS09050 +0.2 0.7 CAP domain-containing protein compare
MMP_RS04120 +0.2 1.5 hypothetical protein compare
MMP_RS08325 +0.2 1.5 hypothetical protein compare
MMP_RS02720 +0.2 0.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS03280 +0.2 1.4 pyridoxamine 5'-phosphate oxidase family protein compare
MMP_RS06035 +0.2 1.6 glycosyltransferase family 2 protein compare
MMP_RS02770 +0.2 0.6 hypothetical protein compare
MMP_RS08615 +0.2 0.5 flagellar protein G compare
MMP_RS06250 +0.2 1.3 hypothetical protein compare
MMP_RS02815 +0.2 0.6 hypothetical protein compare
MMP_RS08085 +0.2 1.3 hypothetical protein compare
MMP_RS02595 +0.2 0.4 putative zinc-binding protein compare
MMP_RS05900 +0.2 0.9 tetratricopeptide repeat protein compare
MMP_RS07925 +0.2 0.9 haloacid dehalogenase compare
MMP_RS04350 +0.2 1.4 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS09030 +0.2 1.0 hypothetical protein compare
MMP_RS01435 +0.2 0.8 DMT family transporter compare
MMP_RS03010 +0.2 1.4 cupin domain-containing protein compare
MMP_RS07835 +0.2 1.0 TldD/PmbA family protein compare
MMP_RS03125 +0.2 0.9 cell division ATPase MinD compare
MMP_RS06515 +0.2 0.5 UPF0489 family protein compare
MMP_RS04050 +0.2 0.8 hypothetical protein compare
MMP_RS07115 +0.2 1.1 MBL fold metallo-hydrolase compare
MMP_RS02025 +0.2 1.2 DNA-directed DNA polymerase compare
MMP_RS01460 +0.2 0.6 hypothetical protein compare
MMP_RS04700 +0.2 1.1 hypothetical protein compare
MMP_RS07570 +0.2 1.0 nucleotidyltransferase family protein compare
MMP_RS00375 +0.2 1.2 ammonium transporter compare
MMP_RS02170 +0.2 0.6 CBS domain-containing protein compare
MMP_RS03890 +0.2 1.0 DUF2540 domain-containing protein compare
MMP_RS01950 +0.2 1.4 hypothetical protein compare
MMP_RS02710 +0.2 1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07550 +0.2 1.3 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS08405 +0.2 1.2 MFS transporter compare
MMP_RS08380 +0.2 1.0 phosphatase PAP2 family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms