Experiment set4IT007 for Pedobacter sp. GW460-11-11-14-LB5

Compare to:

Lactitol 10mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
CA265_RS15895 +5.8 27.3 hypothetical protein compare
CA265_RS18235 +4.9 12.0 peptidase compare
CA265_RS23145 +4.5 21.7 hypothetical protein compare
CA265_RS14625 +3.2 22.2 hypothetical protein compare
CA265_RS15900 +3.1 1.8 hypothetical protein compare
CA265_RS18230 +3.0 5.9 two-component sensor histidine kinase compare
CA265_RS13695 +2.8 4.6 hypothetical protein compare
CA265_RS20355 +2.8 5.8 hypothetical protein compare
CA265_RS05725 +2.2 10.4 hypothetical protein compare
CA265_RS08905 +2.1 5.2 DNA helicase RecQ compare
CA265_RS05655 +2.0 13.1 hypothetical protein compare
CA265_RS14550 +1.7 8.7 hypothetical protein compare
CA265_RS22790 +1.7 9.2 hypothetical protein compare
CA265_RS12740 +1.6 3.2 hypothetical protein compare
CA265_RS09725 +1.6 13.1 tolB protein precursor compare
CA265_RS23190 +1.6 4.7 transcription elongation factor GreA compare
CA265_RS02990 +1.6 8.5 mannosyltransferase compare
CA265_RS16005 +1.5 4.7 hypothetical protein compare
CA265_RS07455 +1.5 1.9 hypothetical protein compare
CA265_RS10740 +1.4 6.2 DNA-binding response regulator compare
CA265_RS04990 +1.4 4.6 short chain dehydrogenase compare
CA265_RS17690 +1.4 9.0 DNA-binding response regulator compare
CA265_RS15270 +1.4 6.1 hypothetical protein compare
CA265_RS19760 +1.3 3.7 hypothetical protein compare
CA265_RS14530 +1.3 2.2 nicotinate-nucleotide diphosphorylase (carboxylating) compare
CA265_RS17695 +1.3 6.1 hypothetical protein compare
CA265_RS05660 +1.3 6.7 DNA-binding response regulator compare
CA265_RS13175 +1.3 1.2 hypothetical protein compare
CA265_RS22450 +1.2 4.8 GntR family transcriptional regulator compare
CA265_RS00815 +1.2 3.6 hypothetical protein compare
CA265_RS17710 +1.2 7.4 hypothetical protein compare
CA265_RS13265 +1.1 3.4 DNA-binding protein compare
CA265_RS21060 +1.1 3.0 hypothetical protein compare
CA265_RS10745 +1.1 8.0 diguanylate cyclase compare
CA265_RS20495 +1.1 4.9 hypothetical protein compare
CA265_RS18555 +1.1 3.0 hypothetical protein compare
CA265_RS14925 +1.1 2.8 hypothetical protein compare
CA265_RS17225 +1.1 8.6 hypothetical protein compare
CA265_RS17720 +1.1 8.2 hypothetical protein compare
CA265_RS16140 +1.1 1.3 hypothetical protein compare
CA265_RS20480 +1.1 7.3 restriction endonuclease subunit S compare
CA265_RS06900 +1.0 2.5 hypothetical protein compare
CA265_RS06265 +1.0 2.2 cold-shock protein compare
CA265_RS24355 +1.0 3.1 transcriptional regulator compare
CA265_RS06585 +1.0 3.9 hypothetical protein compare
CA265_RS16550 +1.0 1.5 acyl carrier protein compare
CA265_RS21870 +1.0 4.0 DNA-binding response regulator compare
CA265_RS13240 +1.0 2.2 preprotein translocase subunit YajC compare
CA265_RS15070 +1.0 3.2 hypothetical protein compare
CA265_RS17200 +1.0 3.9 DNA mismatch repair protein MutL compare
CA265_RS07610 +1.0 1.5 KTSC domain-containing protein compare
CA265_RS14935 +1.0 7.7 hypothetical protein compare
CA265_RS18125 +1.0 4.0 gliding motility protein GldL compare
CA265_RS00650 +1.0 2.1 hypothetical protein compare
CA265_RS24480 +0.9 2.2 hypothetical protein compare
CA265_RS16145 +0.9 1.6 PIN domain nuclease compare
CA265_RS04330 +0.9 4.6 transcriptional regulator compare
CA265_RS05620 +0.9 0.8 hypothetical protein compare
CA265_RS06230 +0.9 2.7 hypothetical protein compare
CA265_RS00585 +0.9 7.2 translocation/assembly module TamB compare
CA265_RS18755 +0.9 3.0 beta-ketoacyl-[acyl-carrier-protein] synthase II compare
CA265_RS19030 +0.9 4.2 hypothetical protein compare
CA265_RS08775 +0.9 1.1 hypothetical protein compare
CA265_RS00270 +0.9 1.2 hypothetical protein compare
CA265_RS14665 +0.9 5.8 hypothetical protein compare
CA265_RS06365 +0.9 5.3 hypothetical protein compare
CA265_RS04710 +0.9 1.8 hypothetical protein compare
CA265_RS22785 +0.9 3.4 hypothetical protein compare
CA265_RS16295 +0.9 5.2 LacI family transcriptional regulator compare
CA265_RS23985 +0.9 4.9 gliding motility lipoprotein GldB compare
CA265_RS19360 +0.9 3.0 peptidylprolyl isomerase compare
CA265_RS10040 +0.9 1.6 hypothetical protein compare
CA265_RS22640 +0.9 2.9 chloride channel protein compare
CA265_RS25120 +0.8 4.2 aminopeptidase compare
CA265_RS08880 +0.8 5.2 chromate transporter compare
CA265_RS13970 +0.8 6.1 hypothetical protein compare
CA265_RS11545 +0.8 2.3 hypothetical protein compare
CA265_RS07360 +0.8 2.9 hypothetical protein compare
CA265_RS20750 +0.8 0.9 hypothetical protein compare
CA265_RS20485 +0.8 5.0 hypothetical protein compare
CA265_RS24895 +0.8 4.1 hypothetical protein compare
CA265_RS23045 +0.8 1.6 cold-shock protein compare
CA265_RS08755 +0.8 3.5 response regulator compare
CA265_RS10910 +0.8 5.0 iron/manganese transporter compare
CA265_RS12450 +0.8 3.1 endonuclease/exonuclease/phosphatase compare
CA265_RS13245 +0.8 3.2 hypothetical protein compare
CA265_RS17715 +0.8 7.4 hypothetical protein compare
CA265_RS20490 +0.8 4.8 hypothetical protein compare
CA265_RS10390 +0.8 1.8 hypothetical protein compare
CA265_RS12100 +0.8 3.9 hypothetical protein compare
CA265_RS18090 +0.8 5.9 gliding motility protein compare
CA265_RS00885 +0.8 3.5 hypothetical protein compare
CA265_RS16390 +0.8 3.7 polysaccharide deacetylase family protein compare
CA265_RS20195 +0.8 2.3 hypothetical protein compare
CA265_RS17340 +0.8 4.0 hypothetical protein compare
CA265_RS22950 +0.8 1.6 hypothetical protein compare
CA265_RS05495 +0.8 2.6 hypothetical protein compare
CA265_RS06405 +0.8 2.1 hypothetical protein compare
CA265_RS08655 +0.7 1.7 glyoxalase family protein compare
CA265_RS09415 +0.7 0.5 hypothetical protein compare
CA265_RS20070 +0.7 2.8 NadR compare
CA265_RS02100 +0.7 2.2 hypothetical protein compare
CA265_RS12280 +0.7 1.6 hypothetical protein compare
CA265_RS20465 +0.7 0.9 hypothetical protein compare
CA265_RS17390 +0.7 3.0 PadR family transcriptional regulator compare
CA265_RS14125 +0.7 1.2 hypothetical protein compare
CA265_RS11025 +0.7 1.2 hypothetical protein compare
CA265_RS07520 +0.7 3.8 cation diffusion facilitator family transporter compare
CA265_RS14740 +0.7 3.6 biopolymer transporter ExbB compare
CA265_RS04635 +0.7 5.6 CusA/CzcA family heavy metal efflux RND transporter compare
CA265_RS22820 +0.7 3.6 flagellar motor protein MotB compare
CA265_RS17440 +0.7 5.0 Fis family transcriptional regulator compare
CA265_RS02965 +0.7 2.6 hypothetical protein compare
CA265_RS17705 +0.7 4.9 hypothetical protein compare
CA265_RS07460 +0.7 2.9 deoxynucleoside kinase compare
CA265_RS18120 +0.7 5.1 gliding motility protein GldM compare
CA265_RS03290 +0.7 3.7 gliding motility-associated ABC transporter permease subunit GldF compare
CA265_RS22805 +0.7 3.6 glycosyl transferase compare
CA265_RS09395 +0.7 2.1 hypothetical protein compare
CA265_RS15910 +0.7 3.9 hypothetical protein compare
CA265_RS14745 +0.7 3.4 biopolymer transporter ExbD compare
CA265_RS17685 +0.7 3.3 hypothetical protein compare
CA265_RS21195 +0.7 4.1 hypothetical protein compare
CA265_RS16205 +0.7 1.7 transcriptional regulator compare
CA265_RS01735 +0.7 3.1 hypothetical protein compare
CA265_RS20585 +0.7 1.4 hypothetical protein compare
CA265_RS11050 +0.7 2.2 hypothetical protein compare
CA265_RS08895 +0.7 4.8 mannose-1-phosphate guanylyltransferase compare
CA265_RS19955 +0.7 1.9 hypothetical protein compare
CA265_RS16820 +0.7 1.8 type I methionyl aminopeptidase compare
CA265_RS16245 +0.7 2.5 secretory protein compare
CA265_RS14670 +0.7 3.8 hypothetical protein compare
CA265_RS19500 +0.7 3.1 methyltransferase type 11 compare
CA265_RS04640 +0.7 2.9 efflux transporter periplasmic adaptor subunit compare
CA265_RS06040 +0.7 0.9 hypothetical protein compare
CA265_RS00335 +0.7 1.5 hypothetical protein compare
CA265_RS23835 +0.7 2.3 hypothetical protein compare
CA265_RS23960 +0.7 0.8 glycine cleavage system protein T compare
CA265_RS03260 +0.7 3.5 multidrug ABC transporter ATP-binding protein compare
CA265_RS04650 +0.6 3.6 two-component sensor histidine kinase compare
CA265_RS18115 +0.6 2.9 gliding motility protein GldN compare
CA265_RS19810 +0.6 1.3 hypothetical protein compare
CA265_RS06995 +0.6 2.8 hypothetical protein compare
CA265_RS10305 +0.6 2.8 hypothetical protein compare
CA265_RS10920 +0.6 1.5 SsrA-binding protein compare
CA265_RS18175 +0.6 2.0 fasciclin compare
CA265_RS07840 +0.6 1.6 hypothetical protein compare
CA265_RS11740 +0.6 1.9 hypothetical protein compare
CA265_RS20575 +0.6 3.0 1,4-beta-xylanase compare
CA265_RS06595 +0.6 0.5 Arc family DNA binding domain-containing protein compare
CA265_RS21000 +0.6 2.1 ribosome silencing factor compare
CA265_RS06975 +0.6 2.4 hypothetical protein compare
CA265_RS07735 +0.6 1.1 transcriptional regulator compare
CA265_RS16235 +0.6 3.1 hypothetical protein compare
CA265_RS22395 +0.6 1.6 VOC family virulence protein compare
CA265_RS22690 +0.6 3.4 hypothetical protein compare
CA265_RS06990 +0.6 2.8 hypothetical protein compare
CA265_RS16515 +0.6 0.7 hypothetical protein compare
CA265_RS03330 +0.6 1.6 hypothetical protein compare
CA265_RS18130 +0.6 4.4 gliding motility-associated lipoprotein compare
CA265_RS16395 +0.6 2.8 hypothetical protein compare
CA265_RS17635 +0.6 1.5 hypothetical protein compare
CA265_RS05365 +0.6 2.7 hypothetical protein compare
CA265_RS09560 +0.6 3.7 galactose-1-epimerase compare
CA265_RS14750 +0.6 2.8 energy transducer TonB compare
CA265_RS18560 +0.6 3.0 hypothetical protein compare
CA265_RS13125 +0.6 1.9 GNAT family N-acetyltransferase compare
CA265_RS04655 +0.6 2.6 DNA-binding response regulator compare
CA265_RS22165 +0.6 1.1 hypothetical protein compare
CA265_RS22630 +0.6 1.8 nucleoside-diphosphate sugar epimerase compare
CA265_RS13025 +0.6 3.9 transmembrane glycosyltransferase compare
CA265_RS24995 +0.6 1.7 hypothetical protein compare
CA265_RS05350 +0.6 2.8 hypothetical protein compare
CA265_RS23030 +0.6 1.4 serine protease compare
CA265_RS18595 +0.6 1.3 hypothetical protein compare
CA265_RS11610 +0.6 0.7 RNA-binding protein S4 compare
CA265_RS23460 +0.6 2.0 hypothetical protein compare
CA265_RS13000 +0.6 2.0 hypothetical protein compare
CA265_RS21185 +0.6 2.4 L-aspartate oxidase compare
CA265_RS25260 +0.6 1.7 hypothetical protein compare
CA265_RS07885 +0.6 2.3 response regulator compare
CA265_RS06400 +0.6 3.4 DNA-binding response regulator compare
CA265_RS24385 +0.6 1.2 GNAT family N-acetyltransferase compare
CA265_RS17575 +0.6 3.4 acyl-CoA dehydrogenase compare
CA265_RS25215 +0.6 1.4 MBL fold hydrolase compare
CA265_RS01750 +0.6 1.3 hypothetical protein compare
CA265_RS23560 +0.6 1.8 DNA-binding protein compare
CA265_RS11620 +0.6 3.7 sterol desaturase compare
CA265_RS23635 +0.6 3.9 gliding motility lipoprotein GldJ compare
CA265_RS03170 +0.6 2.3 short-chain dehydrogenase compare
CA265_RS05355 +0.6 3.4 RagB/SusD family nutrient uptake outer membrane protein compare
CA265_RS06360 +0.5 3.9 hypothetical protein compare
CA265_RS00785 +0.5 1.1 hypothetical protein compare
CA265_RS04995 +0.5 1.3 hypothetical protein compare
CA265_RS21600 +0.5 2.0 hypothetical protein compare
CA265_RS20350 +0.5 2.4 gliding motility lipoprotein GldH compare
CA265_RS15115 +0.5 2.7 porin compare
CA265_RS04230 +0.5 2.9 short-chain dehydrogenase compare
CA265_RS15210 +0.5 1.6 DNA-binding response regulator compare
CA265_RS01630 +0.5 2.3 glycosyl transferase family 2 compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Lactitol in Pedobacter sp. GW460-11-11-14-LB5

For carbon source Lactitol across organisms