Experiment set4IT006 for Pseudomonas fluorescens FW300-N2C3

Compare to:

LB with Sodium perchlorate monohydrate 75 mM

200 most important genes:

  gene name fitness t score description  
AO356_05995 -4.4 -4.0 hypothetical protein compare
AO356_08905 -4.2 -2.9 glycosyl transferase compare
AO356_03375 -3.8 -2.6 ExsB family protein compare
AO356_10170 -3.4 -3.3 chemotaxis protein CheY compare
AO356_19420 -3.2 -2.2 septum formation inhibitor compare
AO356_18805 -3.2 -2.2 magnesium transporter compare
AO356_03420 -3.1 -8.0 UDP-N-acetyl-D-glucosamine dehydrogenase compare
AO356_20920 -3.1 -5.5 peptidase compare
AO356_09780 -3.0 -5.5 peptidase S41 compare
AO356_11315 -3.0 -2.1 shikimate dehydrogenase compare
AO356_05670 -2.9 -2.8 recombinase RecA compare
AO356_22795 -2.9 -3.4 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_03350 -2.9 -5.8 glycosyl transferase compare
AO356_03400 -2.7 -5.8 aminotransferase DegT compare
AO356_14505 -2.7 -2.6 peptidase M23 compare
AO356_04560 -2.7 -3.1 serine peptidase compare
AO356_08895 -2.7 -1.8 GlcNAc-PI de-N-acetylase compare
AO356_06575 -2.6 -2.5 outer membrane protein assembly factor BamB compare
AO356_21125 -2.6 -4.3 cyclic peptide transporter compare
AO356_12380 -2.6 -7.7 ATP-dependent DNA helicase RecG compare
AO356_08890 -2.6 -8.3 glycosyltransferase compare
AO356_15920 -2.5 -3.8 DNA transporter compare
AO356_03360 -2.5 -3.1 hypothetical protein compare
AO356_16955 -2.5 -6.4 disulfide bond formation protein B compare
AO356_03425 -2.4 -7.7 chain-length determining protein compare
AO356_16485 -2.4 -7.6 hypothetical protein compare
AO356_03415 -2.4 -7.4 oxidoreductase compare
AO356_20890 -2.4 -5.7 zinc ABC transporter permease compare
AO356_17985 -2.4 -4.8 cold-shock protein compare
AO356_20915 -2.4 -3.2 thiamine pyrophosphate-binding protein compare
AO356_03380 -2.4 -5.4 glycosyl amidation-associated protein WbuZ compare
AO356_03405 -2.3 -4.1 serine acetyltransferase compare
AO356_06990 -2.3 -5.1 toluene tolerance protein compare
AO356_05565 -2.3 -4.6 hypothetical protein compare
AO356_03355 -2.2 -3.7 hypothetical protein compare
AO356_20900 -2.2 -8.0 ABC transporter substrate-binding protein compare
AO356_06005 -2.2 -3.5 zinc metallopeptidase RseP compare
AO356_07005 -2.2 -2.1 ABC transporter ATP-binding protein compare
AO356_18020 -2.1 -3.7 ATP-dependent DNA helicase RuvA compare
AO356_20885 -2.1 -3.1 metal ABC transporter substrate-binding protein compare
AO356_04575 -2.1 -8.5 RNA polymerase subunit sigma compare
AO356_11045 -2.1 -8.6 phosphate-binding protein compare
AO356_04025 -2.1 -1.7 hypothetical protein compare
AO356_00355 -2.1 -7.5 chemotaxis protein CheY compare
AO356_11025 -2.0 -5.2 transcriptional regulator PhoU compare
AO356_15200 -2.0 -6.1 hypothetical protein compare
AO356_13485 -2.0 -2.6 chemotaxis protein CheY compare
AO356_24240 -1.9 -5.0 ABC transporter ATP-binding protein compare
AO356_00385 -1.9 -1.7 peptidylprolyl isomerase compare
AO356_04525 -1.9 -5.3 hypothetical protein compare
AO356_09170 -1.9 -3.8 glycosyl transferase compare
AO356_16155 -1.9 -4.8 hypothetical protein compare
AO356_17515 -1.9 -8.3 murein transglycosylase compare
AO356_01740 -1.9 -2.8 DNA-binding protein compare
AO356_08910 -1.8 -3.6 carbamoyltransferase compare
AO356_07910 -1.8 -1.7 exodeoxyribonuclease V subunit alpha compare
AO356_07055 -1.8 -1.7 phosphocarrier protein HPr compare
AO356_26210 -1.8 -1.6 histidine kinase compare
AO356_14075 -1.8 -2.1 amino acid ABC transporter substrate-binding protein compare
AO356_11040 -1.8 -12.9 phosphate ABC transporter permease compare
AO356_09775 -1.8 -7.1 peptidase M23 compare
AO356_22950 -1.8 -1.5 peptidylprolyl isomerase compare
AO356_02190 -1.7 -5.6 hypothetical protein compare
AO356_03365 -1.7 -3.3 UDP-N-acetylglucosamine 2-epimerase compare
AO356_19335 -1.7 -9.4 peptidase S41 compare
AO356_15330 -1.7 -4.1 D-alanyl-D-alanine carboxypeptidase compare
AO356_06995 -1.7 -4.9 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_10165 -1.7 -5.2 ATPase compare
AO356_02465 -1.7 -2.5 carbonate dehydratase compare
AO356_02555 -1.7 -4.9 GntR family transcriptional regulator compare
AO356_15420 -1.7 -4.4 hypothetical protein compare
AO356_04355 -1.6 -2.8 MFS transporter compare
AO356_19835 -1.6 -1.9 histidine kinase compare
AO356_11030 -1.6 -8.5 phosphate ABC transporter ATP-binding protein compare
AO356_26195 -1.6 -3.4 TetR family transcriptional regulator compare
AO356_17785 -1.6 -1.5 heme utilization protein compare
AO356_16150 -1.6 -11.0 penicillin-binding protein 1B conserved
AO356_13350 -1.6 -10.6 cell division protein FtsX compare
AO356_07480 -1.6 -2.6 carbamoyl phosphate synthase large subunit compare
AO356_29270 -1.6 -1.6 ABC transporter permease compare
AO356_20905 -1.6 -3.9 hypothetical protein compare
AO356_01750 -1.6 -3.1 ATP-dependent Clp protease proteolytic subunit compare
AO356_19635 -1.6 -5.9 TetR family transcriptional regulator compare
AO356_25870 -1.6 -4.0 secretion protein HlyD compare
AO356_17770 -1.5 -1.4 hypothetical protein compare
AO356_21320 -1.5 -1.3 tRNA-Asn compare
AO356_27180 -1.5 -3.1 hypothetical protein compare
AO356_17075 -1.5 -2.6 cytochrome C compare
AO356_17065 -1.5 -1.7 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
AO356_12725 -1.5 -3.8 recombinase XerC compare
AO356_10880 -1.5 -1.3 hypothetical protein compare
AO356_23990 -1.5 -1.4 amino acid ABC transporter compare
AO356_05540 -1.5 -2.0 cold-shock protein compare
AO356_02720 -1.4 -1.9 type III secretion protein compare
AO356_20335 -1.4 -2.2 hypothetical protein compare
AO356_30345 -1.4 -3.5 IclR family transcriptional regulator compare
AO356_21165 -1.4 -5.6 macrolide ABC transporter ATP-binding protein compare
AO356_04885 -1.4 -4.7 multidrug transporter compare
AO356_03345 -1.4 -6.3 hypothetical protein compare
AO356_12925 -1.3 -1.5 GntR family transcriptional regulator compare
AO356_15325 -1.3 -1.3 hypothetical protein compare
AO356_12660 -1.3 -3.7 diguanylate cyclase compare
AO356_28200 -1.3 -6.0 macrolide transporter compare
AO356_18475 -1.3 -2.5 chemotaxis protein CheY compare
AO356_13445 -1.3 -1.2 dihydroorotase compare
AO356_28205 -1.3 -4.6 hemolysin secretion protein D compare
AO356_03245 -1.3 -2.0 hypothetical protein compare
AO356_27615 -1.3 -1.6 hypothetical protein compare
AO356_08930 -1.3 -1.8 heptose kinase compare
AO356_17090 -1.2 -3.5 phospholipid-binding protein compare
AO356_19080 -1.2 -6.1 dehydrogenase compare
AO356_11035 -1.2 -5.3 phosphate ABC transporter permease compare
AO356_20340 -1.2 -3.8 hypothetical protein compare
AO356_29695 -1.2 -2.3 polysaccharide deacetylase compare
AO356_06580 -1.2 -1.4 GTP-binding protein compare
AO356_16225 -1.2 -7.5 paraquat-inducible protein A compare
AO356_16520 -1.2 -1.8 Fe-S-oxidoreductase compare
AO356_02955 -1.2 -1.0 hypothetical protein compare
AO356_16230 -1.2 -7.7 paraquat-inducible protein A compare
AO356_25535 -1.2 -1.6 hypothetical protein compare
AO356_15290 -1.2 -2.3 gamma-glutamyl phosphate reductase compare
AO356_19045 -1.2 -6.8 chemotaxis protein CheY compare
AO356_16760 -1.2 -3.5 hypothetical protein compare
AO356_13700 -1.2 -2.4 hypothetical protein compare
AO356_16185 -1.2 -3.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
AO356_08585 -1.2 -2.4 50S ribosomal protein L9 compare
AO356_00870 -1.2 -2.2 tRNA-Pro compare
AO356_21085 -1.2 -3.2 cupin compare
AO356_01745 -1.1 -2.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_01545 -1.1 -1.2 hypothetical protein compare
AO356_03385 -1.1 -2.8 imidazole glycerol phosphate synthase subunit HisH compare
AO356_06385 -1.1 -2.2 recombinase XerD compare
AO356_20175 -1.1 -1.5 3-oxoacyl-ACP synthase compare
AO356_20475 -1.1 -1.4 hypothetical protein compare
AO356_27995 -1.1 -1.2 thioredoxin reductase compare
AO356_28740 -1.1 -1.8 oxidoreductase compare
AO356_11635 -1.1 -5.8 recombinase RecF compare
AO356_14920 -1.1 -1.4 hypothetical protein compare
AO356_17020 -1.1 -3.0 cytochrome D ubiquinol oxidase subunit III compare
AO356_08235 -1.1 -4.5 histidine kinase compare
AO356_18060 -1.1 -4.1 hypothetical protein compare
AO356_26440 -1.1 -2.2 TetR family transcriptional regulator compare
AO356_19650 -1.1 -7.0 serine/threonine protein kinase compare
AO356_29515 -1.1 -1.5 energy transducer TonB compare
AO356_15745 -1.0 -1.9 transcription elongation factor GreAB compare
AO356_11675 -1.0 -5.2 chromosome partitioning protein compare
AO356_29795 -1.0 -1.7 amino acid transporter compare
AO356_07000 -1.0 -1.9 ABC transporter permease compare
AO356_24245 -1.0 -1.9 siderophore-iron reductase FhuF compare
AO356_15930 -1.0 -2.9 laccase compare
AO356_02460 -1.0 -1.2 hypothetical protein compare
AO356_20210 -1.0 -4.2 TetR family transcriptional regulator compare
AO356_22520 -1.0 -1.5 glyoxalase compare
AO356_30060 -1.0 -2.0 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase compare
AO356_04740 -1.0 -1.7 hypothetical protein compare
AO356_07750 -1.0 -2.6 plasmid stabilization protein compare
AO356_05760 -1.0 -1.7 phage tail protein compare
AO356_25830 -1.0 -1.4 DNA repair protein compare
AO356_17400 -1.0 -1.2 transcriptional regulator compare
AO356_20895 -1.0 -2.4 manganese ABC transporter ATP-binding protein compare
AO356_11585 -1.0 -2.7 lipid A biosynthesis lauroyl acyltransferase compare
AO356_02800 -1.0 -1.9 transporter compare
AO356_17950 -0.9 -4.2 histidine kinase compare
AO356_22775 -0.9 -1.8 hypothetical protein compare
AO356_11465 -0.9 -4.4 DNA polymerase I compare
AO356_27635 -0.9 -2.4 histidine kinase compare
AO356_18090 -0.9 -5.6 AMP-dependent synthetase compare
AO356_19210 -0.9 -2.0 hypothetical protein compare
AO356_16235 -0.9 -7.2 mammalian cell entry protein compare
AO356_21515 -0.9 -1.2 antitoxin compare
AO356_13210 -0.9 -3.7 hypothetical protein compare
AO356_11495 -0.9 -3.2 hypothetical protein compare
AO356_25750 -0.9 -1.4 GntR family transcriptional regulator compare
AO356_03595 -0.9 -1.4 carbon storage regulator compare
AO356_22145 -0.9 -3.8 ATP-dependent Clp protease adaptor ClpS compare
AO356_30290 -0.9 -2.5 rubredoxin compare
AO356_28460 -0.9 -1.9 short-chain dehydrogenase compare
AO356_19050 -0.9 -1.7 cysteine synthase compare
AO356_08210 -0.9 -3.7 hypothetical protein compare
AO356_16095 -0.9 -3.7 molecular chaperone DnaK compare
AO356_09225 -0.9 -3.6 3-oxoacyl-ACP synthase compare
AO356_08640 -0.9 -2.1 membrane protease HflC compare
AO356_29185 -0.9 -2.6 peptide transporter compare
AO356_05790 -0.9 -2.2 hypothetical protein compare
AO356_00525 -0.9 -1.6 cobalamin biosynthesis protein CobE compare
AO356_08670 -0.9 -1.2 N-acetylmuramoyl-L-alanine amidase compare
AO356_19645 -0.9 -3.7 ABC transporter compare
AO356_21135 -0.9 -3.2 class V aminotransferase compare
AO356_08875 -0.9 -1.6 toluene tolerance protein compare
AO356_26220 -0.9 -1.2 diguanylate cyclase compare
AO356_11990 -0.9 -5.3 DNA helicase II compare
AO356_18080 -0.9 -5.6 LysR family transcriptional regulator compare
AO356_13325 -0.9 -4.0 peptidase M16 compare
AO356_03430 -0.8 -2.1 hypothetical protein compare
AO356_11610 -0.8 -1.1 glycerol acyltransferase compare
AO356_18025 -0.8 -1.4 ATP-dependent DNA helicase RuvB compare
AO356_19315 -0.8 -1.6 hypothetical protein compare
AO356_08800 -0.8 -3.8 hypothetical protein compare
AO356_17485 -0.8 -1.8 elongation factor 4 compare
AO356_06935 -0.8 -1.4 glycerate dehydrogenase compare


Specific Phenotypes

For 8 genes in this experiment

For stress Sodium perchlorate monohydrate in Pseudomonas fluorescens FW300-N2C3

For stress Sodium perchlorate monohydrate across organisms