Experiment set4IT006 for Methanococcus maripaludis JJ

Compare to:

H2 N-free with 2mM Adenosine

200 most important genes:

  gene name fitness t score description  
MMJJ_RS03295 -3.4 -9.9 PHP domain-containing protein compare
MMJJ_RS08855 -3.1 -2.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS05065 -3.0 -1.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS03895 -2.9 -1.8 hydrogenase expression/formation protein HypE compare
MMJJ_RS06925 -2.9 -1.2 GMP synthase subunit A compare
MMJJ_RS05450 -2.9 -11.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS06820 -2.9 -3.4 CBS domain-containing protein compare
MMJJ_RS05115 -2.8 -4.4 P-II family nitrogen regulator compare
MMJJ_RS03055 -2.8 -1.4 hypothetical protein compare
MMJJ_RS06010 -2.8 -2.7 hypothetical protein compare
MMJJ_RS08170 -2.6 -0.8 diaminopimelate decarboxylase compare
MMJJ_RS03270 -2.5 -1.2 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS04050 -2.5 -1.0 dihydroneopterin aldolase family protein compare
MMJJ_RS00570 -2.5 -1.0 ribonuclease P compare
MMJJ_RS07840 -2.4 -2.1 Glu-tRNA(Gln) amidotransferase subunit GatD compare
MMJJ_RS06725 -2.4 -6.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04485 -2.3 -5.2 riboflavin synthase compare
MMJJ_RS00345 -2.3 -7.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS05110 -2.3 -10.5 ammonium transporter conserved
MMJJ_RS04565 -2.3 -1.4 sirohydrochlorin nickelochelatase compare
MMJJ_RS09095 -2.3 -4.4 MMPL family transporter compare
MMJJ_RS08130 -2.3 -0.5 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS04110 -2.3 -5.3 hypothetical protein compare
MMJJ_RS02090 -2.2 -2.2 tyramine--L-glutamate ligase compare
MMJJ_RS03920 -2.2 -9.5 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS05935 -2.2 -1.1 Era-like GTP-binding protein compare
MMJJ_RS02055 -2.2 -7.2 GTP 3',8-cyclase MoaA compare
MMJJ_RS07995 -2.2 -4.0 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS00235 -2.2 -7.7 hypothetical protein compare
MMJJ_RS09175 -2.2 -0.7 anthranilate synthase component I compare
MMJJ_RS04010 -2.1 -6.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS03230 -2.1 -1.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS07160 -2.1 -10.8 M20 family metallo-hydrolase compare
MMJJ_RS05380 -2.1 -0.7 hypothetical protein compare
MMJJ_RS03585 -2.1 -0.7 methanogenesis marker 6 protein compare
MMJJ_RS00645 -2.1 -5.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03065 -2.1 -7.8 CBS domain-containing protein compare
MMJJ_RS03760 -2.0 -1.4 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06265 -2.0 -6.9 8-amino-7-oxononanoate synthase compare
MMJJ_RS03995 -2.0 -2.8 PHP domain-containing protein compare
MMJJ_RS03155 -2.0 -6.6 hypothetical protein compare
MMJJ_RS09375 -2.0 -0.8 hypothetical protein compare
MMJJ_RS07980 -2.0 -6.6 biotin synthase BioB compare
MMJJ_RS05595 -2.0 -1.5 hypothetical protein compare
MMJJ_RS04595 -2.0 -2.7 hypothetical protein compare
MMJJ_RS00275 -2.0 -1.0 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS04180 -2.0 -1.2 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05575 -2.0 -1.9 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS05655 -1.9 -1.9 HisA/HisF family protein compare
MMJJ_RS05225 -1.9 -0.6 Gar1/Naf1 family protein compare
MMJJ_RS00025 -1.9 -5.9 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
MMJJ_RS06655 -1.9 -5.5 transcriptional regulator compare
MMJJ_RS05765 -1.9 -0.6 flagellar protein E compare
MMJJ_RS07005 -1.9 -3.4 transcription factor S compare
MMJJ_RS02045 -1.9 -1.4 molybdenum cofactor guanylyltransferase compare
MMJJ_RS04685 -1.9 -3.4 carbamoyltransferase HypF compare
MMJJ_RS00900 -1.9 -4.8 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS08080 -1.9 -4.4 TIGR00300 family protein compare
MMJJ_RS02035 -1.9 -3.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS03620 -1.9 -2.9 DUF2097 domain-containing protein compare
MMJJ_RS01935 -1.9 -1.8 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS05260 -1.9 -2.2 ATP-grasp domain-containing protein compare
MMJJ_RS05445 -1.9 -0.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS04800 -1.9 -2.5 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06260 -1.9 -4.1 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS06375 -1.8 -2.1 UbiX family flavin prenyltransferase compare
MMJJ_RS04520 -1.8 -2.5 coenzyme F430 synthase compare
MMJJ_RS06025 -1.8 -8.4 4Fe-4S binding protein compare
MMJJ_RS06040 -1.8 -1.7 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05810 -1.8 -1.8 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS06240 -1.8 -1.3 dihydropteroate synthase-like protein compare
MMJJ_RS00270 -1.8 -1.2 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS07485 -1.8 -4.6 DedA family protein compare
MMJJ_RS06390 -1.8 -0.8 NADPH-dependent F420 reductase compare
MMJJ_RS06750 -1.8 -0.9 homoaconitase large subunit compare
MMJJ_RS06740 -1.7 -4.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS03060 -1.7 -1.5 methanogenesis marker 7 protein compare
MMJJ_RS03225 -1.7 -1.0 4Fe-4S binding protein compare
MMJJ_RS06270 -1.7 -3.5 dethiobiotin synthase compare
MMJJ_RS08470 -1.7 -1.4 ferredoxin family protein compare
MMJJ_RS06015 -1.7 -4.7 Na(+)/H(+) antiporter subunit B compare
MMJJ_RS06730 -1.7 -3.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS07870 -1.7 -6.9 ABC transporter substrate-binding protein compare
MMJJ_RS01750 -1.7 -0.9 ferrous iron transport protein A compare
MMJJ_RS06020 -1.7 -2.8 hypothetical protein compare
MMJJ_RS09135 -1.7 -4.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS07360 -1.7 -0.7 TIGR00269 family protein compare
MMJJ_RS06880 -1.7 -0.7 EhaG family protein compare
MMJJ_RS06220 -1.7 -2.3 polyamine aminopropyltransferase compare
MMJJ_RS08035 -1.7 -4.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS01915 -1.7 -4.4 precorrin-6A reductase compare
MMJJ_RS06800 -1.7 -5.4 prefoldin subunit alpha compare
MMJJ_RS06200 -1.6 -1.1 phosphoglycerate dehydrogenase compare
MMJJ_RS07355 -1.6 -3.7 MoaD/ThiS family protein compare
MMJJ_RS06035 -1.6 -4.7 NADH-quinone oxidoreductase subunit B family protein compare
MMJJ_RS05140 -1.6 -2.6 DUF2666 domain-containing protein compare
MMJJ_RS04040 -1.6 -3.2 prefoldin subunit beta compare
MMJJ_RS03125 -1.6 -1.1 GMC oxidoreductase compare
MMJJ_RS06945 -1.6 -6.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS04995 -1.6 -2.2 Tfx family DNA-binding protein compare
MMJJ_RS08180 -1.6 -5.6 ABC transporter ATP-binding protein compare
MMJJ_RS03170 -1.6 -4.3 DUF5612 domain-containing protein compare
MMJJ_RS08320 -1.6 -0.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS00265 -1.6 -3.1 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS03610 -1.6 -3.5 HIT family protein compare
MMJJ_RS08020 -1.6 -5.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04475 -1.5 -1.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06005 -1.5 -4.0 energy conserving hydrogenase EhbF compare
MMJJ_RS04145 -1.5 -4.0 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS05770 -1.5 -0.8 flagellar protein D compare
MMJJ_RS07430 -1.5 -1.7 ribonuclease VapC compare
MMJJ_RS00210 -1.5 -0.8 DUF530 family protein compare
MMJJ_RS09090 -1.5 -4.9 TetR/AcrR family transcriptional regulator compare
MMJJ_RS06175 -1.5 -0.8 DUF1743 domain-containing protein compare
MMJJ_RS06905 -1.5 -0.7 hypothetical protein compare
MMJJ_RS03220 -1.5 -8.0 inosine/xanthosine triphosphatase compare
MMJJ_RS06940 -1.5 -6.1 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS04980 -1.5 -1.4 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS04790 -1.5 -1.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS04155 -1.5 -2.2 hypothetical protein compare
MMJJ_RS01600 -1.5 -0.9 radical SAM protein compare
MMJJ_RS06930 -1.5 -1.1 type II methionyl aminopeptidase compare
MMJJ_RS07155 -1.5 -4.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06185 -1.5 -2.4 cobalamin biosynthesis protein compare
MMJJ_RS06630 -1.5 -3.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS01565 -1.4 -3.8 TIGR00267 family protein compare
MMJJ_RS03615 -1.4 -1.3 cobalt-precorrin-8 methylmutase compare
MMJJ_RS03965 -1.4 -0.6 DNA-directed RNA polymerase subunit L compare
MMJJ_RS08095 -1.4 -1.0 cobyric acid synthase CobQ compare
MMJJ_RS03880 -1.4 -7.6 TraB/GumN family protein compare
MMJJ_RS06155 -1.4 -2.3 phosphatidylglycerophosphatase A compare
MMJJ_RS00205 -1.4 -1.4 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS05870 -1.4 -2.2 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06490 -1.4 -0.8 methanogenesis marker 2 protein compare
MMJJ_RS02920 -1.4 -0.8 30S ribosomal protein S27ae compare
MMJJ_RS07470 -1.4 -0.6 50S ribosome-binding GTPase compare
MMJJ_RS06170 -1.4 -4.3 hypothetical protein compare
MMJJ_RS03650 -1.4 -3.4 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS08330 -1.4 -1.2 SufD family Fe-S cluster assembly protein compare
MMJJ_RS05610 -1.4 -0.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS02140 -1.4 -4.9 preflagellin peptidase FlaK compare
MMJJ_RS07265 -1.3 -5.0 tRNA (adenine-N1)-methyltransferase compare
MMJJ_RS07635 -1.3 -5.2 response regulator transcription factor compare
MMJJ_RS07280 -1.3 -4.6 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07945 -1.3 -1.1 4Fe-4S binding protein compare
MMJJ_RS07000 -1.3 -0.6 TrkH family potassium uptake protein compare
MMJJ_RS01645 -1.3 -5.1 acetolactate synthase small subunit compare
MMJJ_RS06000 -1.3 -2.2 cation:proton antiporter subunit C compare
MMJJ_RS01555 -1.3 -7.0 Na/Pi cotransporter family protein compare
MMJJ_RS00935 -1.3 -5.5 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS05105 -1.3 -3.9 P-II family nitrogen regulator compare
MMJJ_RS03670 -1.3 -2.0 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS07455 -1.3 -2.4 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS08250 -1.3 -2.4 hydrogenase maturation peptidase HycI compare
MMJJ_RS09230 -1.3 -2.9 hypothetical protein compare
MMJJ_RS00675 -1.3 -6.1 nitrogenase compare
MMJJ_RS07165 -1.3 -7.8 chromosome segregation protein SMC compare
MMJJ_RS01810 -1.3 -0.8 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS07950 -1.3 -1.1 4Fe-4S binding protein compare
MMJJ_RS06805 -1.3 -1.2 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS06150 -1.3 -2.1 DUF483 domain-containing protein compare
MMJJ_RS08230 -1.3 -1.0 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS04675 -1.3 -1.9 thiamine pyrophosphate-binding protein compare
MMJJ_RS00600 -1.3 -1.2 hydroxymethylbilane synthase compare
MMJJ_RS04670 -1.3 -3.6 DUF2117 domain-containing protein compare
MMJJ_RS06745 -1.3 -4.6 energy-coupling factor ABC transporter permease compare
MMJJ_RS08185 -1.3 -4.9 ABC transporter permease compare
MMJJ_RS06715 -1.3 -3.8 lactaldehyde dehydrogenase compare
MMJJ_RS01405 -1.3 -0.4 proline--tRNA ligase compare
MMJJ_RS02240 -1.3 -2.6 CGGC domain-containing protein compare
MMJJ_RS07375 -1.2 -4.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS05950 -1.2 -0.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS05280 -1.2 -0.4 hypothetical protein compare
MMJJ_RS01745 -1.2 -3.3 metal-dependent transcriptional regulator compare
MMJJ_RS08405 -1.2 -4.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00680 -1.2 -6.9 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMJJ_RS08770 -1.2 -3.7 HAD family hydrolase compare
MMJJ_RS00065 -1.2 -4.7 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS07865 -1.2 -4.6 zinc ribbon domain-containing protein compare
MMJJ_RS06050 -1.2 -3.2 molybdopterin molybdotransferase MoeA compare
MMJJ_RS06165 -1.2 -5.5 archaeosine synthase subunit alpha compare
MMJJ_RS04515 -1.2 -4.9 HD domain-containing protein compare
MMJJ_RS00040 -1.2 -3.4 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS06635 -1.2 -6.9 4Fe-4S binding protein compare
MMJJ_RS06605 -1.2 -3.3 DUF357 domain-containing protein compare
MMJJ_RS08765 -1.2 -5.6 glycosyltransferase family 9 protein compare
MMJJ_RS04575 -1.2 -3.9 DUF116 domain-containing protein compare
MMJJ_RS01500 -1.2 -3.5 transcriptional regulator compare
MMJJ_RS08925 -1.2 -4.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07975 -1.2 -3.6 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS08000 -1.2 -4.7 HesA/MoeB/ThiF family protein compare
MMJJ_RS03185 -1.2 -0.6 alanine--tRNA ligase compare
MMJJ_RS00560 -1.2 -1.3 homoisocitrate dehydrogenase compare
MMJJ_RS00180 -1.2 -3.7 DNA topoisomerase I compare
MMJJ_RS06735 -1.2 -5.0 cobalt ECF transporter T component CbiQ compare
MMJJ_RS05295 -1.2 -5.8 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS08155 -1.1 -1.3 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS00035 -1.1 -6.8 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS07640 -1.1 -5.9 cache domain-containing protein compare
MMJJ_RS00450 -1.1 -0.5 DUF126 domain-containing protein compare


Specific Phenotypes

For 15 genes in this experiment

For nitrogen source Adenosine in Methanococcus maripaludis JJ

For nitrogen source Adenosine across organisms