• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Overview
  • Specific
  • - Genes
  • + Genes
  • Metrics
  • Experiment set4IT006 for Ralstonia sp. UNC404CL21Col

    Compare to:

    soil EcoFAB sample 1; outgrowth in LB

    Group: soil
    Media:
    Culturing: CL21_ML4, EcoFAB
    By: Dawn Chiniquy on 4-Apr-19

    Specific Phenotypes

    For 10 genes in this experiment

    SEED Subsystems

    Subsystem #Specific
    Anaerobic respiratory reductases 1
    Arginine and Ornithine Degradation 1
    Aromatic amino acid interconversions with aryl acids 1
    Dimethylarginine metabolism 1
    High affinity phosphate transporter and control of PHO regulon 1
    Phosphate metabolism 1
    Potassium homeostasis 1

    Metabolic Maps

    Color code by fitness: see overview map or list of maps.

    Maps containing gene(s) with specific phenotypes:

    • Arginine and proline metabolism

    MetaCyc Pathways

    Pathways that contain genes with specific phenotypes:

    Pathway #Steps #Present #Specific
    L-proline biosynthesis III (from L-ornithine) 3 3 1
    L-arginine degradation I (arginase pathway) 3 3 1
    L-ornithine biosynthesis II 3 3 1
    L-arginine degradation VI (arginase 2 pathway) 4 4 1
    arsenic detoxification (bacteria) 4 2 1
    L-arginine degradation XIII (reductive Stickland reaction) 5 4 1
    arsenate detoxification I 6 3 1
    L-Nδ-acetylornithine biosynthesis 7 5 1
    L-citrulline biosynthesis 8 7 1
    superpathway of L-citrulline metabolism 12 9 1