Experiment set4IT004 for Methanococcus maripaludis S2

Compare to:

H2 deepwell vitamin FREE

200 most important genes:

  gene name fitness t score description  
MMP_RS02280 -3.8 -1.1 DUF211 domain-containing protein compare
MMP_RS03315 -3.7 -1.7 ferrous iron transport protein A compare
MMP_RS02900 -3.7 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06400 -3.5 -2.2 4Fe-4S binding protein compare
MMP_RS03435 -3.5 -2.2 ketol-acid reductoisomerase compare
MMP_RS07845 -3.4 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS00305 -2.9 -2.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS07005 -2.9 -0.8 4Fe-4S binding protein compare
MMP_RS03600 -2.8 -3.0 triose-phosphate isomerase compare
MMP_RS06630 -2.8 -1.2 UPF0058 family protein compare
MMP_RS08790 -2.7 -2.3 translation initiation factor IF-2 subunit alpha compare
MMP_RS05920 -2.7 -0.7 50S ribosomal protein L37e compare
MMP_RS06285 -2.6 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01175 -2.6 -4.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08715 -2.6 -2.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07735 -2.6 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS02240 -2.6 -4.5 methanogenesis marker 7 protein compare
MMP_RS06730 -2.6 -2.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS06355 -2.5 -2.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01500 -2.5 -2.7 CBS domain-containing protein compare
MMP_RS04685 -2.4 -3.5 DUF126 domain-containing protein compare
MMP_RS01610 -2.4 -4.0 hypothetical protein compare
MMP_RS00515 -2.4 -1.0 DUF655 domain-containing protein compare
MMP_RS08745 -2.4 -7.9 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07630 -2.4 -1.7 ATP-binding cassette domain-containing protein compare
MMP_RS01225 -2.3 -6.7 DUF5379 domain-containing protein compare
MMP_RS01265 -2.3 -3.4 hypothetical protein compare
MMP_RS08720 -2.3 -1.9 4Fe-4S binding protein compare
MMP_RS04780 -2.3 -2.9 ribonuclease P compare
MMP_RS05515 -2.3 -7.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06350 -2.3 -7.3 HesA/MoeB/ThiF family protein compare
MMP_RS08650 -2.2 -3.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03025 -2.2 -6.3 molybdenum cofactor guanylyltransferase compare
MMP_RS06895 -2.2 -2.4 selenocysteine-specific translation elongation factor compare
MMP_RS03015 -2.2 -9.6 GTP 3' 8-cyclase MoaA compare
MMP_RS02195 -2.1 -3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04605 -2.1 -4.8 cobalt ECF transporter T component CbiQ compare
MMP_RS05250 -2.1 -1.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08635 -2.1 -2.1 UbiA family prenyltransferase compare
MMP_RS04710 -2.1 -1.5 hypothetical protein compare
MMP_RS08300 -2.1 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS03400 -2.1 -3.6 archease compare
MMP_RS08210 -2.1 -2.6 phosphatidylglycerophosphatase A compare
MMP_RS01005 -2.1 -1.6 riboflavin synthase compare
MMP_RS01380 -2.0 -5.8 PHP domain-containing protein compare
MMP_RS06270 -2.0 -7.4 TIGR00300 family protein compare
MMP_RS05550 -2.0 -0.7 cation:proton antiporter compare
MMP_RS01830 -2.0 -1.9 tRNA-Val compare
MMP_RS02800 -1.9 -6.6 nucleotidyltransferase domain-containing protein compare
MMP_RS07545 -1.9 -1.1 HTH domain-containing protein compare
MMP_RS04615 -1.9 -3.9 PDGLE domain-containing protein compare
MMP_RS02135 -1.9 -5.8 DUF5612 domain-containing protein compare
MMP_RS01220 -1.9 -7.6 hypothetical protein compare
MMP_RS07750 -1.9 -4.7 DUF357 domain-containing protein compare
MMP_RS04620 -1.9 -9.9 cobalt transporter CbiM compare
MMP_RS07600 -1.9 -2.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04500 -1.9 -13.8 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS03035 -1.8 -4.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07730 -1.8 -1.6 pyruvate synthase subunit beta compare
MMP_RS07635 -1.8 -5.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06120 -1.8 -2.1 UPF0147 family protein compare
MMP_RS07555 -1.8 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS00110 -1.8 -2.9 hypothetical protein compare
MMP_RS08820 -1.8 -5.5 hypothetical protein compare
MMP_RS06340 -1.8 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08105 -1.8 -8.9 6-carboxyhexanoate--CoA ligase compare
MMP_RS00130 -1.8 -1.3 nickel-responsive transcriptional regulator NikR compare
MMP_RS06370 -1.7 -4.6 biotin synthase BioB compare
MMP_RS05265 -1.7 -2.4 2-isopropylmalate synthase compare
MMP_RS03700 -1.7 -7.9 sodium:proton antiporter compare
MMP_RS05845 -1.7 -1.9 tRNA-intron lyase compare
MMP_RS08435 -1.7 -2.2 Era-like GTP-binding protein compare
MMP_RS08095 -1.7 -5.5 dethiobiotin synthase compare
MMP_RS06020 -1.6 -4.3 archaeoflavoprotein AfpA compare
MMP_RS07200 -1.6 -6.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04775 -1.6 -3.2 adenosylhomocysteinase compare
MMP_RS06295 -1.6 -5.6 methanogenesis marker 14 protein compare
MMP_RS00300 -1.6 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS02010 -1.6 -6.0 PHP domain-containing protein compare
MMP_RS04720 -1.5 -2.7 DedA family protein compare
MMP_RS02875 -1.5 -9.4 chorismate pyruvate-lyase family protein compare
MMP_RS07540 -1.5 -4.2 CBS domain-containing protein compare
MMP_RS03250 -1.5 -2.3 MJ1244 family protein compare
MMP_RS00985 -1.5 -5.5 CDC48 family AAA ATPase compare
MMP_RS01755 -1.5 -0.9 DUF2097 domain-containing protein compare
MMP_RS08440 -1.5 -2.6 cell division protein SepF compare
MMP_RS06625 -1.5 -1.8 DNA primase compare
MMP_RS03095 -1.5 -6.5 diphthine synthase compare
MMP_RS02355 -1.5 -3.0 30S ribosomal protein S27ae compare
MMP_RS06885 -1.5 -2.8 50S ribosome-binding GTPase compare
MMP_RS01665 -1.5 -3.4 DUF2111 domain-containing protein compare
MMP_RS07645 -1.5 -5.7 aldehyde dehydrogenase family protein compare
MMP_RS05930 -1.5 -2.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS03640 -1.5 -4.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS09020 -1.5 -1.5 hypothetical protein compare
MMP_RS04890 -1.5 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01020 -1.4 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07755 -1.4 -1.1 DUF555 domain-containing protein compare
MMP_RS08100 -1.4 -5.3 8-amino-7-oxononanoate synthase compare
MMP_RS05925 -1.4 -3.5 small nuclear ribonucleoprotein compare
MMP_RS01325 -1.4 -1.8 dihydroneopterin aldolase family protein compare
MMP_RS03475 -1.4 -0.6 hypothetical protein compare
MMP_RS06865 -1.4 -2.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07575 -1.4 -3.8 RNA ligase partner protein compare
MMP_RS06670 -1.4 -4.0 glucose-6-phosphate isomerase compare
MMP_RS08785 -1.4 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS06315 -1.4 -1.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01545 -1.4 -1.0 CBS domain-containing protein compare
MMP_RS07425 -1.4 -4.7 GTP-binding protein compare
MMP_RS07875 -1.4 -4.5 hypothetical protein compare
MMP_RS07380 -1.4 -1.2 transcription elongation factor Spt5 compare
MMP_RS03445 -1.4 -0.9 methanogenesis marker 17 protein compare
MMP_RS01955 -1.3 -1.7 hypothetical protein compare
MMP_RS03385 -1.3 -0.9 cation diffusion facilitator family transporter compare
MMP_RS07195 -1.3 -8.6 M20 family metallo-hydrolase compare
MMP_RS08595 -1.3 -0.9 flagellar protein C compare
MMP_RS05425 -1.3 -4.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS04585 -1.3 -6.5 AIR synthase related protein compare
MMP_RS06130 -1.3 -3.2 peptidylprolyl isomerase compare
MMP_RS01800 -1.3 -3.6 TIGR00303 family protein compare
MMP_RS03140 -1.3 -8.5 hypothetical protein compare
MMP_RS06395 -1.3 -3.6 ThiF family adenylyltransferase compare
MMP_RS05430 -1.3 -4.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS07435 -1.3 -1.9 GMP synthase subunit A compare
MMP_RS06105 -1.3 -4.4 hydrogenase maturation peptidase HycI compare
MMP_RS01900 -1.3 -7.6 hypothetical protein compare
MMP_RS03155 -1.3 -5.6 precorrin-6A reductase compare
MMP_RS06925 -1.3 -2.4 ribonuclease VapC4 compare
MMP_RS02235 -1.3 -5.3 CBS domain-containing protein compare
MMP_RS03580 -1.3 -3.0 signal recognition particle-docking protein FtsY compare
MMP_RS05815 -1.2 -1.7 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02345 -1.2 -2.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01720 -1.2 -2.0 replication factor C large subunit compare
MMP_RS05525 -1.2 -5.6 calcium/sodium antiporter compare
MMP_RS00685 -1.2 -3.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01905 -1.2 -7.6 glycosyltransferase compare
MMP_RS08600 -1.2 -2.0 flagellar protein D compare
MMP_RS06940 -1.2 -2.7 polyprenyl diphosphate synthase compare
MMP_RS08330 -1.2 -4.8 NADH-quinone oxidoreductase subunit H compare
MMP_RS00810 -1.2 -6.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05540 -1.2 -2.5 hypothetical protein compare
MMP_RS01975 -1.2 -7.1 hypothetical protein compare
MMP_RS01885 -1.2 -5.6 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07620 -1.2 -4.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01795 -1.2 -1.0 methanogenesis marker 6 protein compare
MMP_RS05345 -1.2 -5.3 hypothetical protein compare
MMP_RS02145 -1.1 -3.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS01365 -1.1 -2.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01925 -1.1 -4.7 DUF1616 domain-containing protein compare
MMP_RS02165 -1.1 -4.8 tRNA-dihydrouridine synthase compare
MMP_RS01840 -1.1 -5.1 TIGR00289 family protein compare
MMP_RS06600 -1.1 -1.3 class III signal peptide-containing protein compare
MMP_RS06685 -1.1 -5.3 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01725 -1.1 -2.9 class I SAM-dependent methyltransferase family protein compare
MMP_RS06475 -1.1 -2.8 FAD-dependent oxidoreductase compare
MMP_RS06215 -1.1 -2.1 30S ribosomal protein S6e compare
MMP_RS03145 -1.1 -3.0 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08350 -1.1 -0.8 hypothetical protein compare
MMP_RS02190 -1.1 -1.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS04875 -1.1 -4.4 energy-converting hydrogenase B subunit P compare
MMP_RS05800 -1.1 -5.2 B12-binding domain-containing radical SAM protein compare
MMP_RS04850 -1.0 -8.0 UPF0254 family protein compare
MMP_RS00315 -1.0 -5.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03520 -1.0 -1.7 YwbE family protein compare
MMP_RS04090 -1.0 -1.9 hypothetical protein compare
MMP_RS05555 -1.0 -1.0 DUF4040 domain-containing protein compare
MMP_RS00730 -1.0 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08840 -1.0 -5.5 class I SAM-dependent methyltransferase compare
MMP_RS05445 -1.0 -5.7 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS04955 -1.0 -4.4 DNA topoisomerase I compare
MMP_RS07615 -1.0 -4.4 energy-coupling factor ABC transporter permease compare
MMP_RS07695 -1.0 -3.1 DUF3236 domain-containing protein compare
MMP_RS06725 -1.0 -4.1 hypothetical protein compare
MMP_RS01875 -1.0 -4.8 N-acetyltransferase compare
MMP_RS05580 -1.0 -7.3 glycosyltransferase compare
MMP_RS08360 -0.9 -1.8 hypothetical protein compare
MMP_RS01385 -0.9 -0.4 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01880 -0.9 -4.1 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07605 -0.9 -1.6 diadenylate cyclase compare
MMP_RS02100 -0.9 -2.8 metallophosphoesterase compare
MMP_RS01335 -0.9 -1.4 prefoldin subunit beta compare
MMP_RS07420 -0.9 -3.8 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05545 -0.9 -2.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00725 -0.9 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08605 -0.9 -3.6 flagellar protein E compare
MMP_RS00120 -0.9 -2.9 LysR family transcriptional regulator compare
MMP_RS05020 -0.9 -3.4 hypothetical protein compare
MMP_RS00115 -0.9 -4.9 radical SAM protein compare
MMP_RS07700 -0.9 -5.0 DUF1188 domain-containing protein compare
MMP_RS06980 -0.9 -3.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS00895 -0.9 -2.0 hypothetical protein compare
MMP_RS07580 -0.9 -1.7 DUF356 domain-containing protein compare
MMP_RS02885 -0.8 -6.7 molybdopterin biosynthesis protein compare
MMP_RS00050 -0.8 -3.1 AarF/UbiB family protein compare
MMP_RS08460 -0.8 -1.3 proteasome-activating nucleotidase compare
MMP_RS08915 -0.8 -2.6 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS07725 -0.8 -2.2 4Fe-4S dicluster domain-containing protein compare
MMP_RS03205 -0.8 -0.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01600 -0.8 -1.5 50S ribosomal protein L15e compare
MMP_RS00695 -0.8 -0.6 biotin--[acetyl-CoA-carboxylase] ligase compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t1 Sodium acetate in Methanococcus maripaludis S2

For nutrient t1 Sodium acetate across organisms