Experiment set4H39 for Pseudomonas stutzeri RCH2

LB with Sodium Chlorite 0.06 mM

Group: stress
Media: LB + Sodium Chlorite (0.06 mM)
Culturing: psRCH2_ML7, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=orbital
By: Kelly on 6/26/2013
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 561 A5,A6

Specific Phenotypes

For 18 genes in this experiment

For stress Sodium Chlorite in Pseudomonas stutzeri RCH2

For stress Sodium Chlorite across organisms

SEED Subsystems

Subsystem	#Specific
Terminal cytochrome d ubiquinol oxidases	2
Terminal cytochrome oxidases	2
Bacterial RNA-metabolizing Zn-dependent hydrolases	1
Biogenesis of c-type cytochromes	1
Cobalt-zinc-cadmium resistance	1
Conserved gene cluster associated with Met-tRNA formyltransferase	1
Flagellar motility	1
Flagellum	1
Multidrug Resistance Efflux Pumps	1
Periplasmic disulfide interchange	1
Restriction-Modification System	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
NADH to cytochrome bd oxidase electron transfer I	2	2	1
succinate to cytochrome bd oxidase electron transfer	2	2	1
NADH to cytochrome bd oxidase electron transfer II	2	2	1
pyruvate to cytochrome bd oxidase electron transfer	2	1	1