Experiment set4H37 for Pseudomonas stutzeri RCH2

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LB

200 most important genes:

  gene name fitness t score description  
Psest_1492 -5.8 -4.0 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_2872 -4.0 -2.7 protein RecA compare
Psest_0062 -3.9 -4.6 tryptophan synthase, alpha subunit compare
Psest_1496 -3.3 -2.2 Holliday junction DNA helicase, RuvA subunit compare
Psest_3092 -3.1 -2.1 ribonuclease III, bacterial compare
Psest_0958 -3.0 -10.9 Oligoketide cyclase/lipid transport protein compare
Psest_0063 -2.9 -4.0 tryptophan synthase, beta subunit compare
Psest_3449 -2.6 -1.7 DJ-1 family protein compare
Psest_2104 -2.6 -3.9 IscR-regulated protein YhgI compare
Psest_1947 -2.6 -3.4 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_1143 -2.5 -7.4 Small-conductance mechanosensitive channel compare
Psest_0191 -2.5 -1.7 PAS domain S-box compare
Psest_3647 -2.5 -6.7 Indole-3-glycerol phosphate synthase compare
Psest_4078 -2.4 -3.5 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_0309 -2.3 -2.2 RND family efflux transporter, MFP subunit compare
Psest_2584 -2.3 -8.0 Phosphoribosylanthranilate isomerase compare
Psest_2232 -2.3 -9.2 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_2067 -2.3 -2.1 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3123 -2.2 -4.9 dihydroorotase, homodimeric type compare
Psest_3496 -2.2 -1.5 Predicted metal-binding protein compare
Psest_0845 -2.1 -1.0 hypothetical protein compare
Psest_0161 -2.0 -3.3 Membrane-bound metallopeptidase compare
Psest_1724 -2.0 -3.9 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2066 -1.9 -8.4 ABC-type uncharacterized transport system, permease component compare
Psest_4219 -1.9 -1.3 DNA polymerase I compare
Psest_1031 -1.9 -7.9 Uncharacterized protein conserved in bacteria compare
Psest_3648 -1.9 -7.4 anthranilate phosphoribosyltransferase compare
Psest_1242 -1.9 -2.5 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_1704 -1.9 -2.4 Dehydrogenases (flavoproteins) compare
Psest_0846 -1.8 -2.1 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_3908 -1.8 -1.3 Cytochrome c553 compare
Psest_3014 -1.7 -1.7 cob(I)alamin adenosyltransferase compare
Psest_1602 -1.7 -2.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1012 -1.6 -5.1 Signal transduction histidine kinase compare
Psest_0280 -1.6 -10.0 homoserine O-acetyltransferase compare
Psest_3767 -1.6 -3.7 tyrosine recombinase XerC compare
Psest_1540 -1.6 -2.1 biotin-dependent carboxylase uncharacterized domain compare
Psest_0417 -1.6 -2.2 Acyl-CoA dehydrogenases compare
Psest_4274 -1.6 -3.9 hypothetical protein compare
Psest_3960 -1.6 -2.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0498 -1.6 -2.8 ribosome small subunit-dependent GTPase A compare
Psest_0831 -1.6 -1.4 hypothetical protein compare
Psest_2629 -1.6 -2.2 Flp pilus assembly protein, pilin Flp compare
Psest_3998 -1.6 -2.3 glutamate--cysteine ligase compare
Psest_3129 -1.5 -1.8 tyrosine recombinase XerD compare
Psest_4335 -1.5 -2.8 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_2358 -1.5 -1.7 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3700 -1.5 -0.7 hypothetical protein compare
Psest_0313 -1.5 -2.6 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_1765 -1.5 -6.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1659 -1.5 -3.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_2446 -1.5 -1.9 acetyl-CoA acetyltransferases compare
Psest_2944 -1.5 -3.8 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase compare
Psest_2862 -1.4 -7.1 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_0843 -1.4 -5.4 hypothetical protein compare
Psest_0393 -1.4 -3.5 Methylase of chemotaxis methyl-accepting proteins compare
Psest_2243 -1.4 -1.5 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_4258 -1.4 -2.2 ABC-type uncharacterized transport system, auxiliary component compare
Psest_1452 -1.4 -5.7 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
Psest_0030 -1.4 -1.5 Putative NADH-flavin reductase compare
Psest_3012 -1.3 -1.3 cob(II)yrinic acid a,c-diamide reductase compare
Psest_1661 -1.3 -2.9 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_2532 -1.3 -4.4 Uncharacterized protein conserved in bacteria compare
Psest_1657 -1.3 -2.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_0515 -1.3 -3.2 rare lipoprotein A compare
Psest_3649 -1.3 -6.2 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_1920 -1.3 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_3790 -1.3 -5.1 Cytochrome c5 compare
Psest_1167 -1.3 -1.4 hypothetical protein compare
Psest_3745 -1.3 -2.7 Uncharacterized enzyme of heme biosynthesis compare
Psest_0489 -1.3 -3.1 phosphoserine phosphatase SerB compare
Psest_1111 -1.3 -2.7 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_1056 -1.2 -1.9 2-isopropylmalate synthase, bacterial type compare
Psest_2344 -1.2 -2.4 Methyl-accepting chemotaxis protein compare
Psest_3938 -1.2 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0175 -1.2 -5.1 Xaa-Pro aminopeptidase compare
Psest_3810 -1.2 -1.9 orotate phosphoribosyltransferase compare
Psest_3650 -1.2 -7.1 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3305 -1.2 -5.5 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Psest_0359 -1.2 -1.7 Transcriptional regulators compare
Psest_4098 -1.2 -2.3 Superfamily I DNA and RNA helicases compare
Psest_2945 -1.2 -2.1 septum site-determining protein MinC compare
Psest_3477 -1.2 -2.0 Signal transduction histidine kinase compare
Psest_1660 -1.2 -1.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_0466 -1.2 -3.6 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1206 -1.1 -1.8 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1166 -1.1 -2.1 transcriptional regulator, ArgP family compare
Psest_1506 -1.1 -4.3 queuosine biosynthesis protein QueC compare
Psest_2855 -1.1 -1.6 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_0537 -1.1 -1.1 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_1909 -1.1 -2.4 Phosphohistidine phosphatase SixA compare
Psest_0678 -1.1 -1.9 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_1913 -1.1 -2.7 Transcriptional regulator compare
Psest_0389 -1.1 -1.5 hypothetical protein compare
Psest_2460 -1.1 -1.7 hypothetical protein compare
Psest_4363 -1.1 -5.6 ATPases involved in chromosome partitioning compare
Psest_0734 -1.1 -1.6 RND family efflux transporter, MFP subunit compare
Psest_3502 -1.1 -1.4 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Psest_3531 -1.1 -1.3 Peptidase propeptide and YPEB domain. compare
Psest_2357 -1.1 -1.3 Short-chain dehydrogenases of various substrate specificities compare
Psest_0655 -1.1 -1.7 Chemotaxis signal transduction protein compare
Psest_2946 -1.1 -3.6 septum site-determining protein MinD compare
Psest_3228 -1.1 -6.0 Zn-dependent protease with chaperone function compare
Psest_0212 -1.1 -0.9 exodeoxyribonuclease V, gamma subunit compare
Psest_2578 -1.1 -6.9 O-succinylhomoserine sulfhydrylase compare
Psest_3090 -1.0 -5.3 DNA repair protein RecO compare
Psest_1763 -1.0 -3.6 hypothetical protein compare
Psest_3307 -1.0 -4.9 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_3884 -1.0 -0.7 Signal transduction histidine kinase compare
Psest_0066 -1.0 -1.1 Protein of unknown function (DUF3060). compare
Psest_0181 -1.0 -4.6 glycine cleavage system T protein compare
Psest_1910 -1.0 -1.8 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Psest_1804 -1.0 -3.1 Superfamily II DNA and RNA helicases compare
Psest_0209 -1.0 -0.6 membrane protein AbrB duplication compare
Psest_2360 -1.0 -1.1 Uncharacterized protein, putative amidase compare
Psest_3702 -1.0 -1.7 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase compare
Psest_1103 -1.0 -2.3 GTP-binding protein YchF compare
Psest_1940 -1.0 -2.0 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain compare
Psest_4044 -1.0 -5.1 type I site-specific deoxyribonuclease, HsdR family compare
Psest_3303 -1.0 -3.5 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_4004 -1.0 -1.7 Uncharacterized conserved protein compare
Psest_1814 -1.0 -7.3 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2285 -1.0 -3.1 ATP-dependent protease La compare
Psest_3395 -1.0 -1.8 hypothetical protein compare
Psest_3775 -1.0 -2.9 Mg chelatase-related protein compare
Psest_0508 -1.0 -4.6 gamma-glutamyl phosphate reductase compare
Psest_3005 -1.0 -1.8 Fructose-2,6-bisphosphatase compare
Psest_0367 -1.0 -0.7 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_4177 -1.0 -1.3 flagellar biosynthetic protein FliP compare
Psest_4100 -1.0 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_4003 -1.0 -2.5 TIGR00153 family protein compare
Psest_1627 -0.9 -5.7 Superfamily II DNA and RNA helicases compare
Psest_2768 -0.9 -2.1 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_2405 -0.9 -1.6 NAD-dependent protein deacetylases, SIR2 family compare
Psest_1026 -0.9 -2.4 Uncharacterized iron-regulated protein compare
Psest_3456 -0.9 -0.8 RNA polymerase sigma factor, sigma-70 family compare
Psest_0028 -0.9 -1.6 Coproporphyrinogen III oxidase compare
Psest_1013 -0.9 -2.8 phosphoribosylamine--glycine ligase compare
Psest_3894 -0.9 -1.9 Carbon starvation protein, predicted membrane protein compare
Psest_2217 -0.9 -2.3 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes compare
Psest_2229 -0.9 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_2651 -0.9 -2.5 DNA topoisomerase I, bacterial compare
Psest_1053 -0.9 -1.2 hypothetical protein compare
Psest_2756 -0.9 -1.4 hypothetical protein compare
Psest_1377 -0.9 -2.7 hypothetical protein compare
Psest_1574 -0.9 -1.6 phenazine biosynthesis protein PhzF family compare
Psest_1663 -0.9 -1.8 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_0311 -0.9 -2.4 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_3883 -0.9 -3.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0279 -0.9 -3.5 methionine biosynthesis protein MetW compare
Psest_0186 -0.9 -2.0 Protein-disulfide isomerase compare
Psest_0310 -0.9 -2.0 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_1292 -0.9 -4.5 monothiol glutaredoxin, Grx4 family compare
Psest_2714 -0.9 -1.7 7-cyano-7-deazaguanine reductase compare
Psest_3482 -0.9 -1.9 Parvulin-like peptidyl-prolyl isomerase compare
Psest_3331 -0.9 -2.6 rare lipoprotein A compare
Psest_3840 -0.9 -2.6 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) compare
Psest_0656 -0.9 -2.7 Methyl-accepting chemotaxis protein compare
Psest_1411 -0.9 -2.8 AraC-type DNA-binding domain-containing proteins compare
Psest_3044 -0.8 -4.7 deoxycytidine triphosphate deaminase compare
Psest_0722 -0.8 -4.6 Predicted ATPase compare
Psest_3823 -0.8 -1.6 hypothetical protein compare
Psest_3339 -0.8 -4.1 Signal transduction histidine kinase compare
Psest_0542 -0.8 -2.9 AMP nucleosidase compare
Psest_0568 -0.8 -1.5 pseudouridine synthase compare
Psest_2899 -0.8 -1.7 hypothetical protein compare
Psest_3114 -0.8 -5.2 electron transport complex, RnfABCDGE type, C subunit compare
Psest_2566 -0.8 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_1986 -0.8 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_2414 -0.8 -1.3 TolR protein compare
Psest_2348 -0.8 -1.9 urea carboxylase-associated protein 2 compare
Psest_4006 -0.8 -2.9 hypothetical protein compare
Psest_1656 -0.8 -1.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_3338 -0.8 -1.3 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_1363 -0.8 -2.7 Predicted membrane protein compare
Psest_4163 -0.8 -1.4 hypothetical protein compare
Psest_1813 -0.8 -5.8 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_0718 -0.8 -1.5 nicotinate-nucleotide pyrophosphorylase compare
Psest_2088 -0.8 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_0100 -0.8 -0.9 phosphonate ABC transporter, ATP-binding protein compare
Psest_3476 -0.8 -0.5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1421 -0.8 -1.6 Glutathione S-transferase compare
Psest_3080 -0.8 -1.3 AraC-type DNA-binding domain-containing proteins compare
Psest_2884 -0.8 -2.3 HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain compare
Psest_2641 -0.8 -4.9 Conserved secreted protein compare
Psest_1341 -0.7 -3.1 FOG: FHA domain compare
Psest_3047 -0.7 -1.4 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_0312 -0.7 -2.2 Superfamily II DNA and RNA helicases compare
Psest_2121 -0.7 -2.0 Predicted ATPase compare
Psest_3364 -0.7 -2.2 putative efflux protein, MATE family compare
Psest_3878 -0.7 -1.3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_3117 -0.7 -3.1 electron transport complex, RnfABCDGE type, E subunit compare
Psest_3453 -0.7 -1.2 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_2860 -0.7 -3.3 hypothetical protein compare
Psest_0006 -0.7 -3.2 alkyl hydroperoxide reductase, F subunit compare
Psest_3361 -0.7 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_0533 -0.7 -3.0 Sel1 repeat. compare
Psest_1211 -0.7 -2.4 xanthine dehydrogenase, small subunit compare
Psest_1919 -0.7 -1.3 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_1535 -0.7 -2.4 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare


Specific Phenotypes

For 1 genes in this experiment