Experiment set4H29 for Shewanella amazonensis SB2B
LB with Bacitracin 0.125 mg/ml
Group: stressMedia: LB + Bacitracin (0.125 mg/ml)
Culturing: SB2B_ML5, 48 well microplate; Tecan Infinite F200, Aerobic, at 37 (C), shaken=orbital
By: Adam on 7/26/2013
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 590 D7,D8
Specific Phenotypes
For 10 genes in this experiment
For stress Bacitracin in Shewanella amazonensis SB2B
For stress Bacitracin across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Multidrug Resistance Efflux Pumps | 2 |
| Lipid A modifications | 1 |
| Rhamnose containing glycans | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation I | 7 | 2 | 2 |
| L-methionine salvage cycle III | 11 | 6 | 2 |
| L-methionine salvage cycle II (plants) | 11 | 4 | 2 |
| L-methionine salvage cycle I (bacteria and plants) | 12 | 6 | 2 |