Experiment set4H12 for Pseudomonas stutzeri RCH2

Compare to:

LB with MreB Perturbing Compound A22 0.005 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_1496 -4.3 -2.9 Holliday junction DNA helicase, RuvA subunit compare
Psest_1492 -3.9 -4.6 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_3129 -3.3 -2.3 tyrosine recombinase XerD compare
Psest_2067 -3.1 -2.1 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3908 -2.7 -1.2 Cytochrome c553 compare
Psest_0719 -2.7 -7.6 Uncharacterized protein conserved in bacteria compare
Psest_3456 -2.6 -1.7 RNA polymerase sigma factor, sigma-70 family compare
Psest_0487 -2.5 -5.0 Uncharacterized protein conserved in bacteria compare
Psest_0644 -2.4 -2.3 siderophore ferric iron reductase, AHA_1954 family compare
Psest_2424 -2.4 -2.6 K+ transport systems, NAD-binding component compare
Psest_0831 -2.3 -1.5 hypothetical protein compare
Psest_0257 -2.2 -4.2 Predicted Zn-dependent peptidases compare
Psest_4219 -2.2 -1.5 DNA polymerase I compare
Psest_0225 -2.2 -1.5 Predicted permease, DMT superfamily compare
Psest_1602 -2.2 -2.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2358 -2.2 -2.0 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0161 -2.2 -2.9 Membrane-bound metallopeptidase compare
Psest_0998 -2.1 -3.2 poly(A) polymerase compare
Psest_1510 -2.1 -4.2 Putative Zn-dependent protease, contains TPR repeats compare
Psest_3960 -2.0 -2.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0062 -2.0 -7.5 tryptophan synthase, alpha subunit compare
Psest_1058 -2.0 -2.9 ribosomal-protein-alanine acetyltransferase compare
Psest_3479 -1.9 -2.6 molybdenum cofactor synthesis domain compare
Psest_0516 -1.9 -8.8 D-alanyl-D-alanine carboxypeptidase compare
Psest_0309 -1.9 -1.7 RND family efflux transporter, MFP subunit compare
Psest_1505 -1.8 -2.1 Organic radical activating enzymes compare
Psest_2714 -1.8 -2.1 7-cyano-7-deazaguanine reductase compare
Psest_2945 -1.7 -1.9 septum site-determining protein MinC compare
Psest_0515 -1.7 -3.2 rare lipoprotein A compare
Psest_1242 -1.6 -2.4 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_0172 -1.6 -5.1 Uncharacterized protein conserved in bacteria compare
Psest_3296 -1.6 -5.0 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain compare
Psest_0867 -1.6 -1.5 hypothetical protein compare
Psest_1888 -1.6 -1.4 Sua5/YciO/YrdC/YwlC family protein compare
Psest_2414 -1.5 -2.5 TolR protein compare
Psest_3697 -1.5 -1.2 Outer membrane lipoprotein carrier protein LolA. compare
Psest_0514 -1.5 -5.7 lytic murein transglycosylase B compare
Psest_1012 -1.5 -4.0 Signal transduction histidine kinase compare
Psest_1087 -1.4 -1.5 uncharacterized peroxidase-related enzyme compare
Psest_2946 -1.4 -3.7 septum site-determining protein MinD compare
Psest_2068 -1.4 -8.0 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3973 -1.4 -1.8 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_1860 -1.4 -2.2 Uncharacterized conserved protein compare
Psest_3546 -1.4 -1.1 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0691 -1.4 -8.4 ribonuclease R compare
Psest_0310 -1.4 -2.0 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_1692 -1.3 -7.2 conserved hypothetical protein, YceG family compare
Psest_3185 -1.3 -1.7 MoxR-like ATPases compare
Psest_0057 -1.3 -2.8 Predicted transcriptional regulators compare
Psest_0094 -1.3 -1.2 Uncharacterized enzyme of phosphonate metabolism compare
Psest_4196 -1.3 -1.5 Type II secretory pathway, component PulK compare
Psest_0790 -1.3 -3.4 Uncharacterized protein conserved in bacteria compare
Psest_1804 -1.3 -2.7 Superfamily II DNA and RNA helicases compare
Psest_1417 -1.3 -1.1 hypothetical protein compare
Psest_1144 -1.3 -3.8 AmpG-related permease compare
Psest_0054 -1.3 -2.7 hypothetical protein compare
Psest_2066 -1.3 -1.2 ABC-type uncharacterized transport system, permease component compare
Psest_0850 -1.3 -4.2 glucokinase, proteobacterial type compare
Psest_3792 -1.3 -2.0 Putative translation initiation inhibitor, yjgF family compare
Psest_3884 -1.3 -0.8 Signal transduction histidine kinase compare
Psest_0993 -1.2 -6.7 Glucose-6-phosphate isomerase compare
Psest_0466 -1.2 -3.0 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_2766 -1.2 -1.2 hypothetical protein compare
Psest_0861 -1.2 -2.1 hypothetical protein compare
Psest_3039 -1.2 -1.5 periplasmic nitrate reductase, NapE protein compare
Psest_0051 -1.2 -3.0 hypothetical protein compare
Psest_4338 -1.2 -4.6 Fe2+-dicitrate sensor, membrane component compare
Psest_3008 -1.2 -1.4 cobyric acid synthase CobQ compare
Psest_3306 -1.2 -3.4 conserved hypothetical integral membrane protein compare
Psest_3045 -1.2 -2.4 Cold shock proteins compare
Psest_3788 -1.2 -2.3 xanthine phosphoribosyltransferase compare
Psest_2285 -1.2 -3.0 ATP-dependent protease La compare
Psest_1707 -1.1 -4.1 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_1612 -1.1 -3.6 ABC-type multidrug transport system, ATPase component compare
Psest_0532 -1.1 -3.6 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Psest_3832 -1.1 -1.4 hypothetical protein compare
Psest_1884 -1.1 -1.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1185 -1.1 -1.7 heavy metal response regulator compare
Psest_3013 -1.1 -1.0 cobyrinic acid a,c-diamide synthase compare
Psest_3500 -1.1 -1.7 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Psest_3100 -1.1 -6.4 RNA polymerase sigma factor RpoE compare
Psest_1052 -1.1 -2.2 Uncharacterized protein involved in chromosome partitioning compare
Psest_3499 -1.0 -3.0 acyl-CoA thioesterase II compare
Psest_4134 -1.0 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_1472 -1.0 -5.1 Protein of unknown function (DUF3108). compare
Psest_3086 -1.0 -3.6 hypothetical protein compare
Psest_1752 -1.0 -0.9 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_0660 -1.0 -1.4 Methyl-accepting chemotaxis protein compare
Psest_0709 -1.0 -6.0 pseudouridine synthase, RluA family compare
Psest_2308 -1.0 -1.4 Predicted Fe-S protein compare
Psest_0796 -1.0 -2.0 ABC-type transport system involved in multi-copper enzyme maturation, permease component compare
Psest_0063 -1.0 -3.8 tryptophan synthase, beta subunit compare
Psest_0730 -1.0 -2.6 O-6-methylguanine DNA methyltransferase compare
Psest_3813 -1.0 -4.0 ribonuclease PH compare
Psest_0259 -1.0 -0.8 cell division ATP-binding protein FtsE compare
Psest_1506 -1.0 -2.9 queuosine biosynthesis protein QueC compare
Psest_3449 -0.9 -1.0 DJ-1 family protein compare
Psest_4135 -0.9 -2.5 Ketosteroid isomerase homolog compare
Psest_2561 -0.9 -1.0 hypothetical protein compare
Psest_1241 -0.9 -3.9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
Psest_1950 -0.9 -6.4 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family compare
Psest_0779 -0.9 -1.9 tyrosine aminotransferase (EC 2.6.1.57) (from data) compare
Psest_1911 -0.9 -3.5 spermidine synthase compare
Psest_1218 -0.9 -1.8 Predicted endonuclease containing a URI domain compare
Psest_4298 -0.9 -0.6 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_2232 -0.9 -5.1 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1997 -0.9 -1.8 6-phosphogluconolactonase compare
Psest_2138 -0.9 -2.7 RND family efflux transporter, MFP subunit compare
Psest_0095 -0.9 -1.3 phosphonate C-P lyase system protein PhnH compare
Psest_3803 -0.9 -0.7 DNA repair protein radc compare
Psest_3626 -0.9 -3.5 hypothetical protein compare
Psest_4370 -0.9 -1.5 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2566 -0.9 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_0650 -0.9 -1.9 RNA polymerase sigma factor, sigma-70 family compare
Psest_3850 -0.9 -0.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0732 -0.9 -1.2 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_3203 -0.9 -2.4 hypothetical protein compare
Psest_2622 -0.9 -1.5 TadE-like protein. compare
Psest_2565 -0.9 -1.2 Transcriptional regulator compare
Psest_1364 -0.9 -3.4 hypothetical protein compare
Psest_2395 -0.9 -3.1 Uncharacterized conserved protein compare
Psest_1070 -0.9 -1.3 Predicted membrane protein compare
Psest_2581 -0.9 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_0408 -0.9 -1.8 Protein involved in catabolism of external DNA compare
Psest_3231 -0.9 -2.0 hypothetical protein compare
Psest_0459 -0.8 -5.2 Predicted carbamoyl transferase, NodU family compare
Psest_0449 -0.8 -5.9 Glutamine synthetase adenylyltransferase compare
Psest_0212 -0.8 -0.6 exodeoxyribonuclease V, gamma subunit compare
Psest_1562 -0.8 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_4151 -0.8 -1.6 Flagellar hook capping protein compare
Psest_3664 -0.8 -1.6 Predicted phosphotransferase related to Ser/Thr protein kinases compare
Psest_3995 -0.8 -1.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0280 -0.8 -5.6 homoserine O-acetyltransferase compare
Psest_1313 -0.8 -1.1 Uncharacterized conserved small protein compare
Psest_3473 -0.8 -1.5 hypothetical protein compare
Psest_1614 -0.8 -3.7 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component compare
Psest_0485 -0.8 -2.0 clan AA aspartic protease, TIGR02281 family compare
Psest_3827 -0.8 -1.5 Transcriptional regulator compare
Psest_3767 -0.8 -2.0 tyrosine recombinase XerC compare
Psest_1056 -0.8 -1.3 2-isopropylmalate synthase, bacterial type compare
Psest_4177 -0.8 -1.3 flagellar biosynthetic protein FliP compare
Psest_2044 -0.8 -3.1 ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system compare
Psest_3087 -0.8 -2.7 Transcriptional regulator compare
Psest_4209 -0.8 -1.3 Uncharacterized conserved small protein compare
Psest_1617 -0.8 -1.4 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_2882 -0.8 -3.3 hypothetical protein compare
Psest_3883 -0.8 -2.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0744 -0.8 -0.6 Uncharacterized conserved protein compare
Psest_2646 -0.8 -2.0 SOS regulatory protein LexA compare
Psest_0032 -0.8 -3.8 D-alanyl-D-alanine carboxypeptidase compare
Psest_1363 -0.8 -2.5 Predicted membrane protein compare
Psest_3739 -0.8 -2.7 Small-conductance mechanosensitive channel compare
Psest_1053 -0.8 -1.0 hypothetical protein compare
Psest_2398 -0.8 -2.9 SnoaL-like polyketide cyclase. compare
Psest_0368 -0.8 -0.8 Transcriptional regulator compare
Psest_4247 -0.8 -1.1 Serine/threonine protein phosphatase compare
Psest_4396 -0.8 -4.2 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_3967 -0.8 -3.2 Alcohol dehydrogenase, class IV compare
Psest_2092 -0.8 -2.4 hypothetical protein compare
Psest_0542 -0.8 -3.0 AMP nucleosidase compare
Psest_2872 -0.8 -1.1 protein RecA compare
Psest_3247 -0.8 -1.4 Uncharacterized membrane protein compare
Psest_1406 -0.8 -2.6 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Psest_0208 -0.8 -2.9 Uncharacterized protein conserved in bacteria compare
Psest_2511 -0.7 -3.1 molybdenum cofactor biosynthesis protein A, bacterial compare
Psest_4390 -0.7 -2.8 hypothetical protein compare
Psest_3445 -0.7 -3.9 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs compare
Psest_1231 -0.7 -3.6 Na+/H+ antiporter NhaD and related arsenite permeases compare
Psest_1653 -0.7 -5.3 transcription-repair coupling factor (mfd) compare
Psest_4056 -0.7 -1.2 FMN reductase, SsuE family compare
Psest_2121 -0.7 -2.0 Predicted ATPase compare
Psest_2425 -0.7 -2.0 Trk-type K+ transport systems, membrane components compare
Psest_2948 -0.7 -4.5 pseudouridine synthase, RluA family compare
Psest_3878 -0.7 -1.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_4146 -0.7 -1.7 Flagellar basal-body P-ring protein compare
Psest_0575 -0.7 -0.6 HrpA-like helicases compare
Psest_3146 -0.7 -1.1 hypothetical protein compare
Psest_3448 -0.7 -1.9 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family compare
Psest_0822 -0.7 -1.8 Transcriptional regulators compare
Psest_4010 -0.7 -0.9 peroxiredoxin, OsmC subfamily compare
Psest_0201 -0.7 -1.5 PAS domain S-box compare
Psest_1471 -0.7 -2.2 Predicted membrane protein compare
Psest_2169 -0.7 -4.3 malto-oligosyltrehalose synthase compare
Psest_1353 -0.7 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_1596 -0.7 -2.9 ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase compare
Psest_0050 -0.7 -1.8 Predicted acetyltransferase compare
Psest_2515 -0.7 -2.7 cytochrome c oxidase, subunit II compare
Psest_3961 -0.7 -3.0 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Psest_3824 -0.7 -1.3 Predicted membrane protein compare
Psest_2122 -0.7 -0.7 Parvulin-like peptidyl-prolyl isomerase compare
Psest_0545 -0.7 -3.2 urease accessory protein UreG compare
Psest_0511 -0.7 -0.9 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_2362 -0.7 -3.3 Zn-dependent hydrolases, including glyoxylases compare
Psest_0866 -0.7 -2.6 ATP-dependent transcriptional regulator compare
Psest_0260 -0.7 -1.0 Cell division protein compare
Psest_0133 -0.7 -0.8 type VI secretion protein, VC_A0107 family compare
Psest_2632 -0.7 -2.2 ribosomal protein S12 methylthiotransferase RimO compare
Psest_1182 -0.7 -1.8 Transcriptional regulator compare
Psest_0181 -0.7 -2.4 glycine cleavage system T protein compare
Psest_1574 -0.7 -1.2 phenazine biosynthesis protein PhzF family compare


Specific Phenotypes

For 4 genes in this experiment

For stress MreB Perturbing Compound A22 in Pseudomonas stutzeri RCH2

For stress MreB Perturbing Compound A22 across organisms