Experiment set4H11 for Pseudomonas stutzeri RCH2

Compare to:

LB with MreB Perturbing Compound A22 0.002 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_1492 -5.2 -6.1 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_0719 -3.6 -10.4 Uncharacterized protein conserved in bacteria compare
Psest_1510 -3.0 -6.7 Putative Zn-dependent protease, contains TPR repeats compare
Psest_4219 -2.9 -3.4 DNA polymerase I compare
Psest_0062 -2.8 -12.1 tryptophan synthase, alpha subunit compare
Psest_4310 -2.6 -4.2 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_0161 -2.5 -4.6 Membrane-bound metallopeptidase compare
Psest_0516 -2.4 -12.9 D-alanyl-D-alanine carboxypeptidase compare
Psest_2714 -2.4 -3.2 7-cyano-7-deazaguanine reductase compare
Psest_0515 -2.4 -5.6 rare lipoprotein A compare
Psest_0514 -2.2 -8.5 lytic murein transglycosylase B compare
Psest_2946 -2.1 -6.1 septum site-determining protein MinD compare
Psest_2945 -2.1 -3.3 septum site-determining protein MinC compare
Psest_0063 -2.1 -9.2 tryptophan synthase, beta subunit compare
Psest_1471 -2.1 -9.0 Predicted membrane protein compare
Psest_0097 -2.0 -1.7 phosphonates metabolism transcriptional regulator PhnF compare
Psest_1012 -2.0 -6.7 Signal transduction histidine kinase compare
Psest_2944 -2.0 -6.7 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase compare
Psest_0257 -2.0 -4.7 Predicted Zn-dependent peptidases compare
Psest_1144 -1.9 -6.8 AmpG-related permease compare
Psest_2872 -1.9 -2.5 protein RecA compare
Psest_2285 -1.9 -6.1 ATP-dependent protease La compare
Psest_0279 -1.8 -7.4 methionine biosynthesis protein MetW compare
Psest_3777 -1.8 -3.7 diguanylate cyclase (GGDEF) domain compare
Psest_3546 -1.8 -1.7 Phosphatidylglycerophosphatase A and related proteins compare
Psest_2067 -1.7 -2.0 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3565 -1.7 -1.1 hypothetical protein compare
Psest_1692 -1.7 -8.3 conserved hypothetical protein, YceG family compare
Psest_1496 -1.6 -2.7 Holliday junction DNA helicase, RuvA subunit compare
Psest_3767 -1.6 -5.1 tyrosine recombinase XerC compare
Psest_2232 -1.6 -9.0 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1995 -1.6 -8.2 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific compare
Psest_0691 -1.6 -10.5 ribonuclease R compare
Psest_0310 -1.6 -3.2 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_0309 -1.6 -1.6 RND family efflux transporter, MFP subunit compare
Psest_1472 -1.5 -8.5 Protein of unknown function (DUF3108). compare
Psest_0013 -1.5 -8.8 Lauroyl/myristoyl acyltransferase compare
Psest_0998 -1.5 -4.0 poly(A) polymerase compare
Psest_0725 -1.5 -3.9 Negative regulator of beta-lactamase expression compare
Psest_3637 -1.5 -5.6 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases compare
Psest_0212 -1.4 -1.3 exodeoxyribonuclease V, gamma subunit compare
Psest_0280 -1.4 -10.4 homoserine O-acetyltransferase compare
Psest_2992 -1.4 -4.8 Uncharacterized conserved protein compare
Psest_0227 -1.4 -1.8 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific compare
Psest_4243 -1.4 -1.3 type VI secretion lipoprotein, VC_A0113 family compare
Psest_0313 -1.4 -4.8 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_2068 -1.4 -8.9 ABC-type oligopeptide transport system, periplasmic component compare
Psest_1163 -1.4 -3.7 diguanylate cyclase (GGDEF) domain compare
Psest_2584 -1.4 -5.6 Phosphoribosylanthranilate isomerase compare
Psest_0844 -1.3 -3.9 High-affinity Fe2+/Pb2+ permease compare
Psest_3626 -1.3 -5.6 hypothetical protein compare
Psest_3960 -1.3 -1.6 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_3810 -1.3 -3.5 orotate phosphoribosyltransferase compare
Psest_4191 -1.3 -2.6 Transcriptional regulator compare
Psest_2066 -1.2 -3.4 ABC-type uncharacterized transport system, permease component compare
Psest_1765 -1.2 -5.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_4103 -1.2 -1.5 AraC-type DNA-binding domain-containing proteins compare
Psest_2643 -1.2 -2.4 Beta-glucosidase-related glycosidases compare
Psest_3236 -1.2 -3.3 hypothetical protein compare
Psest_0172 -1.2 -6.2 Uncharacterized protein conserved in bacteria compare
Psest_2646 -1.2 -2.6 SOS regulatory protein LexA compare
Psest_4396 -1.2 -7.9 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_0031 -1.2 -1.6 Uncharacterized conserved protein compare
Psest_0445 -1.2 -9.4 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_1707 -1.2 -4.4 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_3480 -1.2 -1.8 molybdenum cofactor biosynthesis protein B, proteobacterial compare
Psest_3002 -1.2 -1.4 Putative translation initiation inhibitor, yjgF family compare
Psest_3296 -1.1 -5.2 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain compare
Psest_0297 -1.1 -3.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3648 -1.1 -5.7 anthranilate phosphoribosyltransferase compare
Psest_1724 -1.1 -3.9 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_3316 -1.1 -5.2 Predicted P-loop-containing kinase compare
Psest_4363 -1.1 -6.5 ATPases involved in chromosome partitioning compare
Psest_2555 -1.1 -6.2 hypothetical protein compare
Psest_1008 -1.1 -1.5 hypothetical protein compare
Psest_3270 -1.1 -2.4 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_3664 -1.1 -2.7 Predicted phosphotransferase related to Ser/Thr protein kinases compare
Psest_2991 -1.1 -5.1 hypothetical protein compare
Psest_2850 -1.1 -1.6 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_0181 -1.1 -5.3 glycine cleavage system T protein compare
Psest_1950 -1.1 -8.1 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family compare
Psest_4345 -1.1 -6.6 Bacteriophytochrome (light-regulated signal transduction histidine kinase) compare
Psest_3458 -1.0 -1.2 hypothetical protein compare
Psest_3084 -1.0 -1.8 methyltransferase, putative compare
Psest_0393 -1.0 -4.4 Methylase of chemotaxis methyl-accepting proteins compare
Psest_4078 -1.0 -2.6 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_2025 -1.0 -1.4 cold shock domain protein CspD compare
Psest_1567 -1.0 -3.8 Transcriptional regulator compare
Psest_2001 -1.0 -2.6 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_2585 -1.0 -1.6 pseudouridylate synthase I compare
Psest_0218 -1.0 -2.6 Acyl-CoA hydrolase compare
Psest_1532 -1.0 -3.4 DNA recombination-dependent growth factor C compare
Psest_2997 -1.0 -6.4 Long-chain fatty acid transport protein compare
Psest_0993 -1.0 -6.2 Glucose-6-phosphate isomerase compare
Psest_2308 -1.0 -1.0 Predicted Fe-S protein compare
Psest_4390 -1.0 -3.9 hypothetical protein compare
Psest_3323 -1.0 -3.3 ribonuclease, Rne/Rng family compare
Psest_4307 -1.0 -2.2 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_0225 -0.9 -1.4 Predicted permease, DMT superfamily compare
Psest_3185 -0.9 -1.8 MoxR-like ATPases compare
Psest_0466 -0.9 -3.4 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1388 -0.9 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_1905 -0.9 -1.7 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_1640 -0.9 -6.0 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_4340 -0.9 -4.0 Protein of unknown function (DUF3617). compare
Psest_0164 -0.9 -1.0 Glutaredoxin, GrxC family compare
Psest_3809 -0.9 -3.3 hypothetical protein compare
Psest_1306 -0.9 -1.0 hypothetical protein compare
Psest_2645 -0.9 -3.6 Transcriptional regulator compare
Psest_3155 -0.9 -2.8 hypothetical protein compare
Psest_0575 -0.9 -0.9 HrpA-like helicases compare
Psest_3838 -0.9 -2.1 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_2968 -0.9 -5.5 flagellar basal-body rod protein FlgB compare
Psest_0487 -0.9 -3.3 Uncharacterized protein conserved in bacteria compare
Psest_2981 -0.9 -2.0 sodium pump decarboxylases, gamma subunit compare
Psest_2681 -0.9 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_3092 -0.8 -1.7 ribonuclease III, bacterial compare
Psest_3647 -0.8 -4.3 Indole-3-glycerol phosphate synthase compare
Psest_0060 -0.8 -1.8 Predicted Fe-S protein compare
Psest_2123 -0.8 -1.5 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_0533 -0.8 -3.8 Sel1 repeat. compare
Psest_2578 -0.8 -5.8 O-succinylhomoserine sulfhydrylase compare
Psest_1302 -0.8 -2.4 Predicted thioesterase compare
Psest_1643 -0.8 -1.0 hypothetical protein compare
Psest_2933 -0.8 -5.3 Signal transduction histidine kinase compare
Psest_2023 -0.8 -3.4 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_0186 -0.8 -2.6 Protein-disulfide isomerase compare
Psest_4252 -0.8 -2.5 Uncharacterized protein conserved in bacteria compare
Psest_3476 -0.8 -1.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1261 -0.8 -3.4 Uncharacterized protein conserved in bacteria compare
Psest_3128 -0.8 -3.4 Protein-disulfide isomerase compare
Psest_3962 -0.8 -0.8 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Psest_3014 -0.8 -1.5 cob(I)alamin adenosyltransferase compare
Psest_1498 -0.7 -2.5 tol-pal system-associated acyl-CoA thioesterase compare
Psest_0367 -0.7 -1.1 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_2344 -0.7 -2.2 Methyl-accepting chemotaxis protein compare
Psest_2513 -0.7 -2.4 Predicted membrane protein compare
Psest_0311 -0.7 -2.9 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_2035 -0.7 -2.5 crcB protein compare
Psest_0843 -0.7 -5.0 hypothetical protein compare
Psest_1149 -0.7 -2.1 Protein affecting phage T7 exclusion by the F plasmid compare
Psest_4286 -0.7 -5.0 Glutamine synthetase compare
Psest_3365 -0.7 -2.8 Predicted membrane protein compare
Psest_1506 -0.7 -3.0 queuosine biosynthesis protein QueC compare
Psest_3860 -0.7 -2.0 Predicted permeases compare
Psest_1452 -0.7 -4.7 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
Psest_4209 -0.7 -1.9 Uncharacterized conserved small protein compare
Psest_0521 -0.7 -4.5 lytic murein transglycosylase compare
Psest_0260 -0.7 -1.1 Cell division protein compare
Psest_3307 -0.7 -4.0 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_1241 -0.7 -4.0 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
Psest_4042 -0.7 -2.1 hypothetical protein compare
Psest_0259 -0.7 -1.2 cell division ATP-binding protein FtsE compare
Psest_0846 -0.7 -2.5 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_0919 -0.7 -1.8 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_4370 -0.7 -1.7 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2712 -0.7 -2.9 Surface lipoprotein compare
Psest_1516 -0.7 -2.0 Uncharacterized lipoprotein compare
Psest_0004 -0.7 -4.6 recF protein compare
Psest_1860 -0.7 -1.0 Uncharacterized conserved protein compare
Psest_2395 -0.7 -3.2 Uncharacterized conserved protein compare
Psest_2138 -0.6 -2.4 RND family efflux transporter, MFP subunit compare
Psest_1242 -0.6 -1.7 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_2581 -0.6 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_2365 -0.6 -2.1 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_1695 -0.6 -1.4 Tfp pilus assembly protein PilZ compare
Psest_3496 -0.6 -0.8 Predicted metal-binding protein compare
Psest_2277 -0.6 -3.2 coenzyme PQQ biosynthesis protein A compare
Psest_4134 -0.6 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_2935 -0.6 -3.1 hypothetical protein compare
Psest_2512 -0.6 -4.2 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_3494 -0.6 -1.1 hypothetical protein compare
Psest_0440 -0.6 -2.9 hypothetical protein compare
Psest_3862 -0.6 -4.8 phosphoenolpyruvate-protein phosphotransferase compare
Psest_1058 -0.6 -1.2 ribosomal-protein-alanine acetyltransferase compare
Psest_0409 -0.6 -2.0 Putative homoserine kinase type II (protein kinase fold) compare
Psest_3173 -0.6 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_4049 -0.6 -1.2 hypothetical protein compare
Psest_2612 -0.6 -2.7 hypothetical protein compare
Psest_2348 -0.6 -1.4 urea carboxylase-associated protein 2 compare
Psest_4102 -0.6 -2.0 peroxiredoxin, Ohr subfamily compare
Psest_2561 -0.6 -0.8 hypothetical protein compare
Psest_1525 -0.6 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_2084 -0.6 -2.4 Fructose-2,6-bisphosphatase compare
Psest_2744 -0.6 -1.4 Uncharacterized conserved protein compare
Psest_0609 -0.6 -1.3 hypothetical protein compare
Psest_0455 -0.6 -3.7 ADP-heptose:LPS heptosyltransferase compare
Psest_1111 -0.6 -1.7 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_3306 -0.6 -2.5 conserved hypothetical integral membrane protein compare
Psest_3145 -0.6 -1.3 hypothetical protein compare
Psest_1791 -0.6 -1.8 ABC-type transport system, involved in lipoprotein release, permease component compare
Psest_0601 -0.6 -1.8 hypothetical protein compare
Psest_0858 -0.6 -2.6 Maltose operon periplasmic protein precursor (MalM). compare
Psest_0357 -0.6 -1.3 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3576 -0.6 -4.9 excinuclease ABC, A subunit compare
Psest_4044 -0.6 -3.5 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0655 -0.6 -1.0 Chemotaxis signal transduction protein compare
Psest_0589 -0.6 -3.5 Uncharacterized protein conserved in bacteria compare
Psest_3305 -0.6 -3.6 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Psest_3732 -0.6 -3.5 polyphosphate kinase 1 compare


Specific Phenotypes

For 4 genes in this experiment

For stress MreB Perturbing Compound A22 in Pseudomonas stutzeri RCH2

For stress MreB Perturbing Compound A22 across organisms