Experiment set3S524 for Enterobacter sp. TBS_079

Compare to:

LB agar plate coculture with Mixed culture; Bacillus zanthoxyli TBS_040 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -7.4 -28.6 hypothetical protein compare
MPMX20_02591 -6.8 -4.7 DNA-binding protein H-NS compare
MPMX20_03010 -4.9 -5.9 UDP-glucose 4-epimerase compare
MPMX20_01950 -4.7 -10.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00106 -4.6 -7.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04442 -4.5 -9.5 Sec-independent protein translocase protein TatC compare
MPMX20_03022 -4.3 -7.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04530 -4.2 -11.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03018 -4.2 -9.7 hypothetical protein compare
MPMX20_04443 -3.9 -5.3 Sec-independent protein translocase protein TatB compare
MPMX20_04440 -3.9 -3.7 Transcription antitermination protein RfaH compare
MPMX20_04483 -3.7 -6.0 Lipid III flippase compare
MPMX20_01366 -3.6 -13.7 Tol-Pal system protein TolQ compare
MPMX20_03019 -3.6 -24.5 hypothetical protein compare
MPMX20_04119 -3.5 -4.1 DNA polymerase III subunit chi compare
MPMX20_03683 -3.4 -3.3 RecBCD enzyme subunit RecB compare
MPMX20_01368 -3.4 -9.5 hypothetical protein compare
MPMX20_01367 -3.4 -12.1 Tol-Pal system protein TolR compare
MPMX20_00108 -3.3 -25.8 hypothetical protein compare
MPMX20_00109 -3.2 -24.0 hypothetical protein compare
MPMX20_01552 -3.2 -8.6 hypothetical protein compare
MPMX20_01370 -3.2 -11.9 Peptidoglycan-associated lipoprotein compare
MPMX20_00110 -3.1 -23.5 hypothetical protein compare
MPMX20_03309 -3.1 -5.4 Phosphocarrier protein HPr compare
MPMX20_01355 -3.1 -2.3 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03986 -3.1 -7.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01369 -3.1 -14.3 Tol-Pal system protein TolB compare
MPMX20_02574 -2.9 -4.6 putative intracellular septation protein A compare
MPMX20_02885 -2.9 -13.2 hypothetical protein compare
MPMX20_01361 -2.9 -5.4 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04595 -2.8 -2.7 Glutamine synthetase compare
MPMX20_00105 -2.8 -18.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04279 -2.8 -4.8 Shikimate kinase 1 compare
MPMX20_04489 -2.8 -20.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03021 -2.8 -14.0 hypothetical protein compare
MPMX20_00102 -2.7 -2.6 hypothetical protein compare
MPMX20_03017 -2.7 -16.1 hypothetical protein compare
MPMX20_04375 -2.6 -9.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03020 -2.6 -9.1 hypothetical protein compare
MPMX20_04374 -2.6 -7.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03753 -2.5 -10.1 Tyrosine recombinase XerD compare
MPMX20_00453 -2.5 -3.1 RNA-binding protein Hfq compare
MPMX20_02887 -2.5 -9.4 hypothetical protein compare
MPMX20_01607 -2.5 -7.9 Outer membrane protein A compare
MPMX20_03685 -2.5 -6.6 RecBCD enzyme subunit RecC compare
MPMX20_02886 -2.4 -16.9 hypothetical protein compare
MPMX20_02896 -2.4 -17.6 Lysozyme RrrD compare
MPMX20_02768 -2.4 -5.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04463 -2.4 -7.3 DNA helicase II compare
MPMX20_03382 -2.4 -1.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02869 -2.4 -20.9 hypothetical protein compare
MPMX20_02020 -2.4 -12.5 Mannose-6-phosphate isomerase compare
MPMX20_02879 -2.4 -7.2 hypothetical protein compare
MPMX20_02884 -2.4 -19.6 hypothetical protein compare
MPMX20_02891 -2.4 -18.5 hypothetical protein compare
MPMX20_04650 -2.3 -5.2 tRNA modification GTPase MnmE compare
MPMX20_02890 -2.3 -16.2 hypothetical protein compare
MPMX20_02767 -2.3 -6.1 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02919 -2.3 -11.5 hypothetical protein compare
MPMX20_02701 -2.3 -3.6 Fatty acid metabolism regulator protein compare
MPMX20_00721 -2.3 -4.1 Chaperone protein DnaJ compare
MPMX20_02901 -2.3 -17.0 hypothetical protein compare
MPMX20_01354 -2.2 -3.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04465 -2.2 -8.0 Tyrosine recombinase XerC compare
MPMX20_02892 -2.2 -17.6 hypothetical protein compare
MPMX20_02883 -2.2 -14.0 hypothetical protein compare
MPMX20_03409 -2.2 -3.6 Iron-binding protein IscA compare
MPMX20_04469 -2.2 -3.8 Adenylate cyclase compare
MPMX20_01030 -2.2 -9.5 Lon protease compare
MPMX20_02895 -2.2 -13.7 hypothetical protein compare
MPMX20_02920 -2.2 -11.0 hypothetical protein compare
MPMX20_03016 -2.2 -18.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03015 -2.2 -18.7 Phosphoglucosamine mutase compare
MPMX20_00807 -2.2 -5.4 Pyruvate dehydrogenase E1 component compare
MPMX20_04197 -2.2 -6.9 Trk system potassium uptake protein TrkA compare
MPMX20_04444 -2.1 -1.6 Sec-independent protein translocase protein TatA compare
MPMX20_00570 -2.1 -13.3 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02871 -2.1 -14.9 hypothetical protein compare
MPMX20_02882 -2.1 -14.5 hypothetical protein compare
MPMX20_02898 -2.1 -17.4 hypothetical protein compare
MPMX20_02889 -2.1 -15.9 hypothetical protein compare
MPMX20_04639 -2.1 -2.3 Phosphate-binding protein PstS compare
MPMX20_01984 -2.0 -3.1 Ribonuclease T compare
MPMX20_00226 -2.0 -10.8 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03310 -2.0 -6.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02880 -2.0 -16.5 hypothetical protein compare
MPMX20_01382 -2.0 -3.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_04641 -2.0 -3.7 Phosphate transport system permease protein PstA compare
MPMX20_02902 -1.9 -12.6 Serine/threonine-protein phosphatase 1 compare
MPMX20_04640 -1.9 -3.7 Phosphate transport system permease protein PstC compare
MPMX20_03215 -1.9 -3.8 NADH-quinone oxidoreductase subunit E compare
MPMX20_03154 -1.9 -10.5 Inner membrane protein YejM compare
MPMX20_02862 -1.9 -13.7 hypothetical protein compare
MPMX20_02766 -1.9 -3.6 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03390 -1.9 -9.2 Outer membrane protein assembly factor BamB compare
MPMX20_02635 -1.8 -3.1 Release factor glutamine methyltransferase compare
MPMX20_02903 -1.8 -10.1 hypothetical protein compare
MPMX20_03338 -1.8 -5.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01362 -1.8 -3.9 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01741 -1.8 -5.9 Dihydroorotase compare
MPMX20_04626 -1.8 -5.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02876 -1.8 -8.6 hypothetical protein compare
MPMX20_02931 -1.8 -12.3 hypothetical protein compare
MPMX20_02916 -1.8 -9.9 hypothetical protein compare
MPMX20_01596 -1.8 -14.4 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04276 -1.8 -6.9 DNA adenine methylase compare
MPMX20_02877 -1.8 -11.6 hypothetical protein compare
MPMX20_02873 -1.8 -12.9 hypothetical protein compare
MPMX20_02870 -1.8 -15.4 hypothetical protein compare
MPMX20_02918 -1.8 -4.5 hypothetical protein compare
MPMX20_02875 -1.8 -13.2 hypothetical protein compare
MPMX20_01549 -1.8 -1.2 ATP-binding/permease protein CydD compare
MPMX20_02888 -1.8 -9.6 hypothetical protein compare
MPMX20_00899 -1.8 -2.7 Ribonuclease HI compare
MPMX20_02926 -1.7 -8.1 hypothetical protein compare
MPMX20_02925 -1.7 -15.2 hypothetical protein compare
MPMX20_02863 -1.7 -14.6 hypothetical protein compare
MPMX20_02915 -1.7 -12.0 hypothetical protein compare
MPMX20_02908 -1.7 -11.3 hypothetical protein compare
MPMX20_02878 -1.7 -10.1 hypothetical protein compare
MPMX20_02866 -1.7 -14.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02860 -1.7 -11.4 hypothetical protein compare
MPMX20_02861 -1.7 -11.2 hypothetical protein compare
MPMX20_01548 -1.7 -1.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01901 -1.7 -3.7 Integration host factor subunit alpha compare
MPMX20_03407 -1.7 -4.6 Chaperone protein HscA compare
MPMX20_02874 -1.7 -14.9 hypothetical protein compare
MPMX20_02868 -1.7 -12.4 Protein UmuD compare
MPMX20_02894 -1.7 -7.8 hypothetical protein compare
MPMX20_04110 -1.7 -6.0 Nitrogen regulatory protein compare
MPMX20_02927 -1.7 -9.5 hypothetical protein compare
MPMX20_02905 -1.7 -11.8 hypothetical protein compare
MPMX20_02917 -1.6 -10.4 hypothetical protein compare
MPMX20_03490 -1.6 -7.5 SsrA-binding protein compare
MPMX20_00739 -1.6 -6.1 Carbamoyl-phosphate synthase small chain compare
MPMX20_02867 -1.6 -10.7 hypothetical protein compare
MPMX20_02864 -1.6 -8.0 hypothetical protein compare
MPMX20_02893 -1.6 -4.5 hypothetical protein compare
MPMX20_01351 -1.6 -5.1 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02930 -1.6 -8.9 hypothetical protein compare
MPMX20_01333 -1.6 -7.3 Negative modulator of initiation of replication compare
MPMX20_02907 -1.5 -11.1 hypothetical protein compare
MPMX20_03226 -1.5 -5.4 Acetate kinase compare
MPMX20_04601 -1.5 -2.6 DNA polymerase I compare
MPMX20_02872 -1.5 -6.8 hypothetical protein compare
MPMX20_01098 -1.5 -6.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03408 -1.5 -3.0 Co-chaperone protein HscB compare
MPMX20_02494 -1.5 -6.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04730 -1.5 -4.2 hypothetical protein compare
MPMX20_00197 -1.5 -2.0 tRNA-Tyr compare
MPMX20_02929 -1.5 -5.6 hypothetical protein compare
MPMX20_03209 -1.4 -2.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_02909 -1.4 -7.9 hypothetical protein compare
MPMX20_02645 -1.4 -7.1 Ribosome-binding ATPase YchF compare
MPMX20_00740 -1.4 -7.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_03013 -1.4 -8.4 dTDP-glucose 4,6-dehydratase compare
MPMX20_02477 -1.4 -3.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_01570 -1.4 -4.4 Integration host factor subunit beta compare
MPMX20_03440 -1.4 -4.6 Elongation factor 4 compare
MPMX20_00107 -1.4 -7.1 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_04162 -1.4 -4.8 3-dehydroquinate dehydratase compare
MPMX20_02924 -1.4 -10.3 hypothetical protein compare
MPMX20_02906 -1.4 -8.4 hypothetical protein compare
MPMX20_01972 -1.3 -2.1 tRNA-Val compare
MPMX20_03218 -1.3 -4.7 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_00093 -1.3 -6.1 Orotate phosphoribosyltransferase compare
MPMX20_00544 -1.3 -6.8 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03447 -1.3 -7.1 ATP-dependent RNA helicase SrmB compare
MPMX20_02881 -1.3 -3.4 hypothetical protein compare
MPMX20_00480 -1.3 -3.3 50S ribosomal protein L9 compare
MPMX20_00258 -1.3 -4.7 Diacylglycerol kinase compare
MPMX20_01097 -1.3 -5.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02928 -1.3 -2.9 hypothetical protein compare
MPMX20_02475 -1.3 -4.4 Putrescine export system permease protein SapB compare
MPMX20_04306 -1.3 -5.2 Glycerol-3-phosphate regulon repressor compare
MPMX20_04140 -1.3 -7.3 Malate dehydrogenase compare
MPMX20_04518 -1.3 -5.6 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01353 -1.3 -5.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03267 -1.3 -3.3 Phosphohistidine phosphatase SixA compare
MPMX20_03756 -1.3 -5.1 FAD assembly factor SdhE compare
MPMX20_02904 -1.3 -8.2 hypothetical protein compare
MPMX20_00812 -1.2 -6.2 Aconitate hydratase B compare
MPMX20_02997 -1.2 -7.4 Exodeoxyribonuclease I compare
MPMX20_03214 -1.2 -7.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_04301 -1.2 -2.3 Fe/S biogenesis protein NfuA compare
MPMX20_02897 -1.2 -6.7 hypothetical protein compare
MPMX20_03012 -1.2 -8.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03210 -1.2 -4.7 NADH-quinone oxidoreductase subunit J compare
MPMX20_01357 -1.2 -6.1 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01352 -1.2 -6.6 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00775 -1.2 -2.8 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03435 -1.2 -2.7 Pyridoxine 5'-phosphate synthase compare
MPMX20_02921 -1.2 -6.3 hypothetical protein compare
MPMX20_01356 -1.2 -7.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02576 -1.1 -2.4 Protein TonB compare
MPMX20_02732 -1.1 -2.5 PhoP/PhoQ regulator MgrB compare
MPMX20_00749 -1.1 -5.0 Chaperone SurA compare
MPMX20_01765 -1.1 -2.5 Ribonuclease E compare
MPMX20_00537 -1.1 -7.6 Trehalose-6-phosphate hydrolase compare
MPMX20_02899 -1.1 -5.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Bacillus zanthoxyli TBS_040 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct across organisms