Experiment set3S522 for Enterobacter sp. TBS_079

Compare to:

LB agar plate coculture with Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -7.4 -33.4 hypothetical protein compare
MPMX20_01950 -5.3 -9.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03010 -5.0 -4.9 UDP-glucose 4-epimerase compare
MPMX20_02591 -5.0 -10.5 DNA-binding protein H-NS compare
MPMX20_00106 -4.7 -6.4 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03022 -4.5 -6.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04443 -4.3 -5.1 Sec-independent protein translocase protein TatB compare
MPMX20_04639 -4.3 -2.9 Phosphate-binding protein PstS compare
MPMX20_04530 -4.1 -12.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04444 -4.0 -2.3 Sec-independent protein translocase protein TatA compare
MPMX20_04440 -4.0 -3.8 Transcription antitermination protein RfaH compare
MPMX20_04483 -3.7 -6.9 Lipid III flippase compare
MPMX20_04442 -3.5 -6.5 Sec-independent protein translocase protein TatC compare
MPMX20_03018 -3.4 -10.2 hypothetical protein compare
MPMX20_03683 -3.3 -4.0 RecBCD enzyme subunit RecB compare
MPMX20_03019 -3.2 -21.8 hypothetical protein compare
MPMX20_00453 -3.2 -4.2 RNA-binding protein Hfq compare
MPMX20_01366 -3.1 -8.3 Tol-Pal system protein TolQ compare
MPMX20_01552 -3.1 -8.7 hypothetical protein compare
MPMX20_03685 -3.0 -6.3 RecBCD enzyme subunit RecC compare
MPMX20_00109 -3.0 -24.1 hypothetical protein compare
MPMX20_03986 -3.0 -5.6 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04601 -2.9 -4.7 DNA polymerase I compare
MPMX20_00108 -2.9 -22.6 hypothetical protein compare
MPMX20_00110 -2.8 -22.3 hypothetical protein compare
MPMX20_01361 -2.8 -6.9 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01368 -2.8 -10.9 hypothetical protein compare
MPMX20_02885 -2.7 -13.2 hypothetical protein compare
MPMX20_01550 -2.6 -4.4 Thioredoxin reductase compare
MPMX20_00105 -2.6 -17.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01367 -2.6 -10.3 Tol-Pal system protein TolR compare
MPMX20_03020 -2.5 -11.8 hypothetical protein compare
MPMX20_00899 -2.5 -3.6 Ribonuclease HI compare
MPMX20_04469 -2.5 -4.1 Adenylate cyclase compare
MPMX20_00102 -2.4 -3.6 hypothetical protein compare
MPMX20_03017 -2.4 -14.8 hypothetical protein compare
MPMX20_03338 -2.4 -7.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01355 -2.4 -2.1 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02701 -2.3 -3.3 Fatty acid metabolism regulator protein compare
MPMX20_02884 -2.3 -18.9 hypothetical protein compare
MPMX20_04626 -2.3 -5.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02892 -2.3 -17.0 hypothetical protein compare
MPMX20_04489 -2.3 -17.7 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04650 -2.2 -5.5 tRNA modification GTPase MnmE compare
MPMX20_02886 -2.2 -15.2 hypothetical protein compare
MPMX20_00226 -2.2 -11.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04463 -2.2 -8.5 DNA helicase II compare
MPMX20_02890 -2.2 -16.0 hypothetical protein compare
MPMX20_01369 -2.2 -12.6 Tol-Pal system protein TolB compare
MPMX20_02891 -2.2 -16.1 hypothetical protein compare
MPMX20_03310 -2.1 -6.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03753 -2.1 -9.8 Tyrosine recombinase XerD compare
MPMX20_04275 -2.1 -3.4 Ribulose-phosphate 3-epimerase compare
MPMX20_03382 -2.1 -1.4 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02901 -2.1 -15.4 hypothetical protein compare
MPMX20_04375 -2.1 -9.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02020 -2.1 -15.1 Mannose-6-phosphate isomerase compare
MPMX20_02919 -2.1 -10.2 hypothetical protein compare
MPMX20_04465 -2.1 -7.9 Tyrosine recombinase XerC compare
MPMX20_02879 -2.1 -12.1 hypothetical protein compare
MPMX20_02869 -2.1 -18.7 hypothetical protein compare
MPMX20_02896 -2.1 -16.6 Lysozyme RrrD compare
MPMX20_01362 -2.0 -4.0 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_01607 -2.0 -6.3 Outer membrane protein A compare
MPMX20_03015 -2.0 -17.7 Phosphoglucosamine mutase compare
MPMX20_03409 -2.0 -4.1 Iron-binding protein IscA compare
MPMX20_00570 -2.0 -12.1 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02768 -2.0 -5.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03021 -2.0 -11.0 hypothetical protein compare
MPMX20_01370 -2.0 -8.3 Peptidoglycan-associated lipoprotein compare
MPMX20_02883 -2.0 -10.9 hypothetical protein compare
MPMX20_02920 -1.9 -11.9 hypothetical protein compare
MPMX20_04119 -1.9 -2.5 DNA polymerase III subunit chi compare
MPMX20_02930 -1.9 -9.6 hypothetical protein compare
MPMX20_03016 -1.9 -16.4 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02902 -1.9 -11.2 Serine/threonine-protein phosphatase 1 compare
MPMX20_02895 -1.9 -11.2 hypothetical protein compare
MPMX20_04197 -1.9 -6.8 Trk system potassium uptake protein TrkA compare
MPMX20_02767 -1.9 -7.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00807 -1.9 -4.8 Pyruvate dehydrogenase E1 component compare
MPMX20_03309 -1.9 -3.2 Phosphocarrier protein HPr compare
MPMX20_02889 -1.9 -14.1 hypothetical protein compare
MPMX20_02882 -1.9 -10.5 hypothetical protein compare
MPMX20_02888 -1.8 -11.6 hypothetical protein compare
MPMX20_04301 -1.8 -5.0 Fe/S biogenesis protein NfuA compare
MPMX20_01969 -1.8 -6.5 Carbonic anhydrase 1 compare
MPMX20_03408 -1.8 -2.9 Co-chaperone protein HscB compare
MPMX20_02576 -1.7 -5.3 Protein TonB compare
MPMX20_02866 -1.7 -14.5 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_04110 -1.7 -5.2 Nitrogen regulatory protein compare
MPMX20_04374 -1.7 -3.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02927 -1.7 -13.5 hypothetical protein compare
MPMX20_02863 -1.7 -14.5 hypothetical protein compare
MPMX20_01548 -1.7 -1.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_01741 -1.7 -5.6 Dihydroorotase compare
MPMX20_02477 -1.7 -4.9 Peptide transport system ATP-binding protein SapD compare
MPMX20_02878 -1.7 -8.4 hypothetical protein compare
MPMX20_02766 -1.7 -5.6 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02880 -1.7 -14.2 hypothetical protein compare
MPMX20_04140 -1.7 -8.3 Malate dehydrogenase compare
MPMX20_02925 -1.7 -14.7 hypothetical protein compare
MPMX20_01382 -1.6 -2.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_02918 -1.6 -10.6 hypothetical protein compare
MPMX20_02635 -1.6 -4.5 Release factor glutamine methyltransferase compare
MPMX20_04276 -1.6 -7.1 DNA adenine methylase compare
MPMX20_02860 -1.6 -10.7 hypothetical protein compare
MPMX20_02862 -1.6 -12.5 hypothetical protein compare
MPMX20_02871 -1.6 -8.9 hypothetical protein compare
MPMX20_02875 -1.6 -12.1 hypothetical protein compare
MPMX20_02876 -1.6 -7.7 hypothetical protein compare
MPMX20_02868 -1.6 -11.3 Protein UmuD compare
MPMX20_03154 -1.6 -10.1 Inner membrane protein YejM compare
MPMX20_02874 -1.6 -13.7 hypothetical protein compare
MPMX20_00721 -1.6 -3.4 Chaperone protein DnaJ compare
MPMX20_02906 -1.6 -9.1 hypothetical protein compare
MPMX20_02907 -1.6 -10.0 hypothetical protein compare
MPMX20_01030 -1.5 -8.1 Lon protease compare
MPMX20_02877 -1.5 -8.7 hypothetical protein compare
MPMX20_02928 -1.5 -8.9 hypothetical protein compare
MPMX20_02887 -1.5 -6.5 hypothetical protein compare
MPMX20_02870 -1.5 -13.8 hypothetical protein compare
MPMX20_02915 -1.5 -11.0 hypothetical protein compare
MPMX20_02929 -1.5 -6.2 hypothetical protein compare
MPMX20_02908 -1.5 -7.9 hypothetical protein compare
MPMX20_02903 -1.5 -7.7 hypothetical protein compare
MPMX20_02893 -1.5 -7.7 hypothetical protein compare
MPMX20_01097 -1.5 -7.1 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01354 -1.5 -3.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02894 -1.5 -6.4 hypothetical protein compare
MPMX20_04518 -1.5 -6.0 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_02905 -1.5 -9.1 hypothetical protein compare
MPMX20_04730 -1.5 -5.3 hypothetical protein compare
MPMX20_02881 -1.5 -4.9 hypothetical protein compare
MPMX20_02926 -1.5 -6.0 hypothetical protein compare
MPMX20_02872 -1.4 -7.9 hypothetical protein compare
MPMX20_02864 -1.4 -5.6 hypothetical protein compare
MPMX20_01351 -1.4 -5.3 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02897 -1.4 -7.2 hypothetical protein compare
MPMX20_02861 -1.4 -10.7 hypothetical protein compare
MPMX20_02873 -1.4 -10.0 hypothetical protein compare
MPMX20_01596 -1.4 -11.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02917 -1.4 -5.3 hypothetical protein compare
MPMX20_03218 -1.4 -4.0 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02344 -1.4 -3.3 hypothetical protein compare
MPMX20_02867 -1.4 -9.4 hypothetical protein compare
MPMX20_02924 -1.4 -9.6 hypothetical protein compare
MPMX20_00258 -1.4 -5.2 Diacylglycerol kinase compare
MPMX20_02931 -1.4 -9.4 hypothetical protein compare
MPMX20_03490 -1.3 -5.5 SsrA-binding protein compare
MPMX20_01350 -1.3 -4.8 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04640 -1.3 -3.4 Phosphate transport system permease protein PstC compare
MPMX20_02916 -1.3 -6.4 hypothetical protein compare
MPMX20_03090 -1.3 -2.0 Methionine--tRNA ligase compare
MPMX20_03390 -1.3 -7.2 Outer membrane protein assembly factor BamB compare
MPMX20_02295 -1.3 -2.8 hypothetical protein compare
MPMX20_02574 -1.3 -2.7 putative intracellular septation protein A compare
MPMX20_04427 -1.3 -1.7 5S ribosomal RNA compare
MPMX20_01549 -1.3 -2.0 ATP-binding/permease protein CydD compare
MPMX20_01958 -1.3 -1.7 Fumarase D compare
MPMX20_01098 -1.2 -4.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02898 -1.2 -9.0 hypothetical protein compare
MPMX20_03440 -1.2 -4.5 Elongation factor 4 compare
MPMX20_00537 -1.2 -8.3 Trehalose-6-phosphate hydrolase compare
MPMX20_04532 -1.2 -3.1 Met repressor compare
MPMX20_01570 -1.2 -3.0 Integration host factor subunit beta compare
MPMX20_04170 -1.2 -2.8 DNA-binding protein Fis compare
MPMX20_01353 -1.2 -3.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02769 -1.2 -2.6 putative transcriptional regulatory protein YebC compare
MPMX20_02909 -1.2 -6.8 hypothetical protein compare
MPMX20_02494 -1.2 -5.3 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01073 -1.2 -2.6 Nucleoid-associated protein YbaB compare
MPMX20_01352 -1.1 -6.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03226 -1.1 -3.4 Acetate kinase compare
MPMX20_01333 -1.1 -4.1 Negative modulator of initiation of replication compare
MPMX20_04595 -1.1 -1.8 Glutamine synthetase compare
MPMX20_03209 -1.1 -2.5 NADH-quinone oxidoreductase subunit K compare
MPMX20_04306 -1.1 -4.8 Glycerol-3-phosphate regulon repressor compare
MPMX20_02102 -1.1 -2.9 hypothetical protein compare
MPMX20_00739 -1.1 -3.9 Carbamoyl-phosphate synthase small chain compare
MPMX20_00134 -1.1 -4.8 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_03013 -1.1 -6.4 dTDP-glucose 4,6-dehydratase compare
MPMX20_03210 -1.0 -5.0 NADH-quinone oxidoreductase subunit J compare
MPMX20_03447 -1.0 -5.6 ATP-dependent RNA helicase SrmB compare
MPMX20_04038 -1.0 -4.2 Glucitol operon repressor compare
MPMX20_04393 -1.0 -4.2 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_02707 -1.0 -2.0 Septum site-determining protein MinC compare
MPMX20_01356 -1.0 -6.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02645 -1.0 -5.2 Ribosome-binding ATPase YchF compare
MPMX20_04731 -1.0 -4.7 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04066 -1.0 -2.7 ATP-dependent RNA helicase DeaD compare
MPMX20_04642 -1.0 -1.4 Phosphate import ATP-binding protein PstB compare
MPMX20_02757 -1.0 -3.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_04309 -1.0 -3.9 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_01286 -1.0 -1.6 Sec-independent protein translocase protein TatE compare
MPMX20_00455 -1.0 -6.2 Modulator of FtsH protease HflK compare
MPMX20_02921 -1.0 -6.5 hypothetical protein compare
MPMX20_01775 -1.0 -4.5 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_02904 -1.0 -5.6 hypothetical protein compare
MPMX20_03227 -1.0 -4.2 Phosphate acetyltransferase compare
MPMX20_00093 -1.0 -4.9 Orotate phosphoribosyltransferase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct across organisms