Experiment set3S521 for Enterobacter sp. TBS_079

Compare to:

LB agar plate coculture with Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -6.6 -35.9 hypothetical protein compare
MPMX20_01950 -5.6 -9.7 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04440 -4.7 -3.2 Transcription antitermination protein RfaH compare
MPMX20_03022 -4.2 -6.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04530 -4.1 -12.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03010 -4.1 -8.6 UDP-glucose 4-epimerase compare
MPMX20_04639 -4.0 -2.7 Phosphate-binding protein PstS compare
MPMX20_00453 -4.0 -3.8 RNA-binding protein Hfq compare
MPMX20_00106 -3.9 -8.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04442 -3.2 -8.1 Sec-independent protein translocase protein TatC compare
MPMX20_03309 -3.2 -4.3 Phosphocarrier protein HPr compare
MPMX20_04595 -3.1 -2.1 Glutamine synthetase compare
MPMX20_04483 -3.0 -6.4 Lipid III flippase compare
MPMX20_03685 -3.0 -4.9 RecBCD enzyme subunit RecC compare
MPMX20_00102 -2.9 -2.0 hypothetical protein compare
MPMX20_02768 -2.8 -4.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01367 -2.7 -12.0 Tol-Pal system protein TolR compare
MPMX20_01552 -2.6 -7.5 hypothetical protein compare
MPMX20_01901 -2.5 -4.1 Integration host factor subunit alpha compare
MPMX20_01368 -2.5 -6.6 hypothetical protein compare
MPMX20_00110 -2.5 -17.9 hypothetical protein compare
MPMX20_00109 -2.4 -19.2 hypothetical protein compare
MPMX20_01607 -2.4 -6.0 Outer membrane protein A compare
MPMX20_03683 -2.4 -5.4 RecBCD enzyme subunit RecB compare
MPMX20_04301 -2.4 -5.0 Fe/S biogenesis protein NfuA compare
MPMX20_03019 -2.4 -16.9 hypothetical protein compare
MPMX20_03408 -2.4 -3.7 Co-chaperone protein HscB compare
MPMX20_02896 -2.3 -16.2 Lysozyme RrrD compare
MPMX20_00105 -2.3 -14.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00108 -2.3 -17.8 hypothetical protein compare
MPMX20_01354 -2.3 -4.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04306 -2.2 -7.0 Glycerol-3-phosphate regulon repressor compare
MPMX20_04443 -2.2 -2.1 Sec-independent protein translocase protein TatB compare
MPMX20_01361 -2.2 -5.5 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04626 -2.2 -5.4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03986 -2.2 -4.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04641 -2.2 -3.7 Phosphate transport system permease protein PstA compare
MPMX20_01366 -2.1 -7.3 Tol-Pal system protein TolQ compare
MPMX20_02898 -2.1 -13.2 hypothetical protein compare
MPMX20_03018 -2.1 -6.8 hypothetical protein compare
MPMX20_01369 -2.0 -10.4 Tol-Pal system protein TolB compare
MPMX20_04686 -2.0 -8.4 Phospholipase D compare
MPMX20_04374 -2.0 -5.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01355 -2.0 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03267 -2.0 -5.7 Phosphohistidine phosphatase SixA compare
MPMX20_01286 -2.0 -1.5 Sec-independent protein translocase protein TatE compare
MPMX20_02895 -2.0 -9.2 hypothetical protein compare
MPMX20_01596 -2.0 -15.3 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04197 -2.0 -6.2 Trk system potassium uptake protein TrkA compare
MPMX20_04650 -1.9 -4.6 tRNA modification GTPase MnmE compare
MPMX20_03382 -1.9 -1.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_02766 -1.9 -4.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04110 -1.9 -6.2 Nitrogen regulatory protein compare
MPMX20_01370 -1.9 -5.2 Peptidoglycan-associated lipoprotein compare
MPMX20_04038 -1.9 -6.9 Glucitol operon repressor compare
MPMX20_04465 -1.9 -7.2 Tyrosine recombinase XerC compare
MPMX20_02885 -1.8 -10.4 hypothetical protein compare
MPMX20_04279 -1.8 -3.4 Shikimate kinase 1 compare
MPMX20_00807 -1.8 -4.3 Pyruvate dehydrogenase E1 component compare
MPMX20_02883 -1.8 -8.1 hypothetical protein compare
MPMX20_03310 -1.8 -5.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03753 -1.8 -8.5 Tyrosine recombinase XerD compare
MPMX20_00739 -1.8 -5.2 Carbamoyl-phosphate synthase small chain compare
MPMX20_01741 -1.8 -5.3 Dihydroorotase compare
MPMX20_00570 -1.8 -11.7 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02591 -1.8 -5.6 DNA-binding protein H-NS compare
MPMX20_02903 -1.7 -5.6 hypothetical protein compare
MPMX20_01028 -1.7 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04375 -1.7 -7.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02901 -1.7 -11.1 hypothetical protein compare
MPMX20_04275 -1.7 -2.9 Ribulose-phosphate 3-epimerase compare
MPMX20_03407 -1.7 -4.1 Chaperone protein HscA compare
MPMX20_00093 -1.7 -6.6 Orotate phosphoribosyltransferase compare
MPMX20_04444 -1.7 -1.9 Sec-independent protein translocase protein TatA compare
MPMX20_02920 -1.7 -8.2 hypothetical protein compare
MPMX20_02886 -1.6 -11.5 hypothetical protein compare
MPMX20_02701 -1.6 -2.2 Fatty acid metabolism regulator protein compare
MPMX20_02902 -1.6 -10.7 Serine/threonine-protein phosphatase 1 compare
MPMX20_01362 -1.6 -3.3 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_02890 -1.6 -10.9 hypothetical protein compare
MPMX20_03447 -1.6 -7.8 ATP-dependent RNA helicase SrmB compare
MPMX20_02494 -1.6 -6.2 Orotidine 5'-phosphate decarboxylase compare
MPMX20_02892 -1.6 -11.8 hypothetical protein compare
MPMX20_01353 -1.6 -5.9 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02891 -1.5 -11.4 hypothetical protein compare
MPMX20_00740 -1.5 -8.8 Carbamoyl-phosphate synthase large chain compare
MPMX20_03020 -1.5 -8.1 hypothetical protein compare
MPMX20_02928 -1.5 -4.5 hypothetical protein compare
MPMX20_03154 -1.5 -8.8 Inner membrane protein YejM compare
MPMX20_00133 -1.5 -6.5 Mannitol operon repressor compare
MPMX20_01549 -1.5 -1.4 ATP-binding/permease protein CydD compare
MPMX20_02020 -1.5 -9.2 Mannose-6-phosphate isomerase compare
MPMX20_02919 -1.5 -7.1 hypothetical protein compare
MPMX20_03440 -1.5 -4.1 Elongation factor 4 compare
MPMX20_02917 -1.4 -7.6 hypothetical protein compare
MPMX20_02477 -1.4 -4.1 Peptide transport system ATP-binding protein SapD compare
MPMX20_00775 -1.4 -4.6 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_04119 -1.4 -2.9 DNA polymerase III subunit chi compare
MPMX20_02884 -1.4 -11.5 hypothetical protein compare
MPMX20_02888 -1.4 -8.2 hypothetical protein compare
MPMX20_03017 -1.4 -9.5 hypothetical protein compare
MPMX20_03015 -1.4 -12.2 Phosphoglucosamine mutase compare
MPMX20_02576 -1.3 -3.2 Protein TonB compare
MPMX20_03409 -1.3 -2.2 Iron-binding protein IscA compare
MPMX20_02767 -1.3 -3.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02889 -1.3 -10.4 hypothetical protein compare
MPMX20_04463 -1.3 -5.6 DNA helicase II compare
MPMX20_02574 -1.3 -3.2 putative intracellular septation protein A compare
MPMX20_02916 -1.3 -5.9 hypothetical protein compare
MPMX20_02930 -1.3 -7.1 hypothetical protein compare
MPMX20_01768 -1.3 -3.0 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01350 -1.3 -4.4 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02925 -1.3 -11.4 hypothetical protein compare
MPMX20_02880 -1.3 -10.9 hypothetical protein compare
MPMX20_03016 -1.3 -11.2 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03580 -1.3 -4.5 Protein RecA compare
MPMX20_02887 -1.3 -3.6 hypothetical protein compare
MPMX20_02929 -1.3 -5.3 hypothetical protein compare
MPMX20_02862 -1.3 -9.6 hypothetical protein compare
MPMX20_02927 -1.3 -6.0 hypothetical protein compare
MPMX20_01352 -1.3 -5.5 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02893 -1.3 -6.6 hypothetical protein compare
MPMX20_02906 -1.3 -5.2 hypothetical protein compare
MPMX20_04642 -1.3 -1.4 Phosphate import ATP-binding protein PstB compare
MPMX20_01548 -1.2 -1.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_02908 -1.2 -7.0 hypothetical protein compare
MPMX20_02864 -1.2 -5.2 hypothetical protein compare
MPMX20_02907 -1.2 -7.1 hypothetical protein compare
MPMX20_00544 -1.2 -5.2 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02909 -1.2 -6.7 hypothetical protein compare
MPMX20_00773 -1.2 -8.1 Catabolite repressor/activator compare
MPMX20_02926 -1.2 -7.0 hypothetical protein compare
MPMX20_02881 -1.2 -4.6 hypothetical protein compare
MPMX20_02905 -1.2 -7.2 hypothetical protein compare
MPMX20_02894 -1.2 -4.8 hypothetical protein compare
MPMX20_00537 -1.2 -7.3 Trehalose-6-phosphate hydrolase compare
MPMX20_01351 -1.2 -3.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03338 -1.2 -3.5 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02869 -1.2 -10.8 hypothetical protein compare
MPMX20_02876 -1.2 -6.8 hypothetical protein compare
MPMX20_00226 -1.2 -6.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02860 -1.2 -8.9 hypothetical protein compare
MPMX20_02475 -1.2 -3.5 Putrescine export system permease protein SapB compare
MPMX20_03021 -1.2 -7.2 hypothetical protein compare
MPMX20_02931 -1.2 -7.3 hypothetical protein compare
MPMX20_02897 -1.2 -5.5 hypothetical protein compare
MPMX20_04194 -1.2 -1.3 Peptide deformylase compare
MPMX20_00720 -1.1 -2.1 Chaperone protein DnaK compare
MPMX20_02924 -1.1 -7.9 hypothetical protein compare
MPMX20_03211 -1.1 -4.0 NADH-quinone oxidoreductase subunit I compare
MPMX20_02863 -1.1 -9.6 hypothetical protein compare
MPMX20_02305 -1.1 -2.6 hypothetical protein compare
MPMX20_03850 -1.1 -4.4 Biopolymer transport protein ExbD compare
MPMX20_04505 -1.1 -6.4 HTH-type transcriptional regulator HdfR compare
MPMX20_02918 -1.1 -7.0 hypothetical protein compare
MPMX20_04489 -1.1 -9.3 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04111 -1.1 -3.5 RNase adapter protein RapZ compare
MPMX20_02871 -1.1 -6.1 hypothetical protein compare
MPMX20_01570 -1.1 -2.1 Integration host factor subunit beta compare
MPMX20_00258 -1.1 -3.8 Diacylglycerol kinase compare
MPMX20_04276 -1.1 -4.9 DNA adenine methylase compare
MPMX20_03013 -1.1 -6.3 dTDP-glucose 4,6-dehydratase compare
MPMX20_03742 -1.1 -4.8 HTH-type transcriptional regulator GalR compare
MPMX20_02868 -1.1 -7.6 Protein UmuD compare
MPMX20_04393 -1.1 -4.1 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_03218 -1.1 -2.8 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02878 -1.1 -6.8 hypothetical protein compare
MPMX20_02877 -1.1 -5.9 hypothetical protein compare
MPMX20_00456 -1.1 -5.4 Modulator of FtsH protease HflC compare
MPMX20_00626 -1.1 -2.2 hypothetical protein compare
MPMX20_02875 -1.1 -8.1 hypothetical protein compare
MPMX20_02915 -1.0 -7.8 hypothetical protein compare
MPMX20_04189 -1.0 -5.2 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03490 -1.0 -3.8 SsrA-binding protein compare
MPMX20_04469 -1.0 -2.7 Adenylate cyclase compare
MPMX20_00721 -1.0 -2.8 Chaperone protein DnaJ compare
MPMX20_02866 -1.0 -8.8 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_01322 -1.0 -6.0 N-acetylglucosamine repressor compare
MPMX20_03209 -1.0 -1.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_00643 -1.0 -3.0 HTH-type transcriptional regulator FarR compare
MPMX20_04058 -1.0 -4.2 hypothetical protein compare
MPMX20_01333 -1.0 -4.6 Negative modulator of initiation of replication compare
MPMX20_02904 -1.0 -6.3 hypothetical protein compare
MPMX20_01097 -1.0 -4.5 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02478 -1.0 -5.0 Putrescine export system ATP-binding protein SapF compare
MPMX20_02879 -1.0 -2.6 hypothetical protein compare
MPMX20_01030 -1.0 -4.6 Lon protease compare
MPMX20_02874 -1.0 -9.0 hypothetical protein compare
MPMX20_02645 -1.0 -4.3 Ribosome-binding ATPase YchF compare
MPMX20_02870 -1.0 -8.5 hypothetical protein compare
MPMX20_04504 -1.0 -3.3 hypothetical protein compare
MPMX20_02899 -1.0 -3.4 hypothetical protein compare
MPMX20_00745 -1.0 -3.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03227 -0.9 -4.2 Phosphate acetyltransferase compare
MPMX20_00673 -0.9 -5.8 Peptide chain release factor RF3 compare
MPMX20_03426 -0.9 -7.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04162 -0.9 -3.7 3-dehydroquinate dehydratase compare
MPMX20_00749 -0.9 -3.6 Chaperone SurA compare
MPMX20_02873 -0.9 -6.7 hypothetical protein compare
MPMX20_00455 -0.9 -5.5 Modulator of FtsH protease HflK compare


Specific Phenotypes

For 3 genes in this experiment

For mixed community Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Rhodococcus aetherivorans MH2 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct across organisms