Experiment set3S518 for Rhodopseudomonas palustris CGA009
Sodium L-Lactate carbon source with 10 mM Sodium Chloride
Group: stressMedia: PM + Sodium L-Lactate (13 mM) + Sodium Chloride (10 mM) + Light intensity (12 µmol photons/m2/s from a 60-W incandescent light bulb)
Culturing: RPal_CGA009_ML8, tube, Anaerobic, at 30 (C)
By: Rpal_McKinlay on 9/8/24
Media components: 12.5 mM Disodium phosphate, 12.5 mM Potassium phosphate monobasic, 1 g/L Ammonium Sulfate, 0.1 mM Sodium thiosulfate pentahydrate, 0.002 g/L 4-Aminobenzoic acid, UW concentrated base (0.02 g/L Nitrilotriacetic acid, 0.0289 g/L Magnesium sulfate, 0.00667 g/L Calcium chloride dihydrate, 1.85e-05 g/L ammonium molybdate tetrahydrate, 0.000698 g/L Iron (II) sulfate heptahydrate, 0.00025 g/L EDTA, 0.001095 g/L Zinc sulfate heptahydrate, 0.000154 g/L Manganese (II) sulfate monohydrate, 3.92e-05 g/L Copper (II) sulfate pentahydrate, 2.5e-05 g/L Cobalt(II) nitrate hexahydrate, 1.77e-05 g/L sodium tetraborate decahydrate)
Specific Phenotypes
For 26 genes in this experiment
For stress Sodium L-Lactate in Rhodopseudomonas palustris CGA009
For stress Sodium L-Lactate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pyrimidine metabolism
- Cysteine metabolism
- Selenoamino acid metabolism
- Nicotinate and nicotinamide metabolism
- Sulfur metabolism
- Fructose and mannose metabolism
- Ascorbate and aldarate metabolism
- Purine metabolism
- Methionine metabolism
- Aminosugars metabolism
- Lipopolysaccharide biosynthesis
- Ether lipid metabolism
- Sphingolipid metabolism
- Pyruvate metabolism
- Glyoxylate and dicarboxylate metabolism
- Carbon fixation in photosynthetic organisms
- Thiamine metabolism
- Riboflavin metabolism
- Nitrogen metabolism
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: