Experiment set3S517 for Enterobacter sp. TBS_079

Compare to:

LB agar plate coculture with Mixed culture; Rhizobium pusense TBS_045 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -7.4 -36.3 hypothetical protein compare
MPMX20_04440 -5.0 -3.4 Transcription antitermination protein RfaH compare
MPMX20_01950 -4.6 -10.0 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04530 -4.4 -12.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03022 -4.1 -8.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02591 -4.0 -9.4 DNA-binding protein H-NS compare
MPMX20_04119 -3.5 -4.7 DNA polymerase III subunit chi compare
MPMX20_03010 -3.3 -11.2 UDP-glucose 4-epimerase compare
MPMX20_01368 -3.3 -11.2 hypothetical protein compare
MPMX20_04442 -3.3 -9.4 Sec-independent protein translocase protein TatC compare
MPMX20_00106 -3.3 -11.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01367 -3.2 -11.9 Tol-Pal system protein TolR compare
MPMX20_00899 -3.2 -3.2 Ribonuclease HI compare
MPMX20_03018 -3.2 -8.7 hypothetical protein compare
MPMX20_04483 -3.1 -6.8 Lipid III flippase compare
MPMX20_03019 -3.1 -21.5 hypothetical protein compare
MPMX20_01366 -3.0 -7.1 Tol-Pal system protein TolQ compare
MPMX20_01361 -2.9 -4.8 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03986 -2.8 -7.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00102 -2.7 -4.4 hypothetical protein compare
MPMX20_03310 -2.7 -6.9 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_00109 -2.7 -21.8 hypothetical protein compare
MPMX20_00108 -2.7 -22.0 hypothetical protein compare
MPMX20_01362 -2.6 -4.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00110 -2.6 -19.6 hypothetical protein compare
MPMX20_03685 -2.6 -6.2 RecBCD enzyme subunit RecC compare
MPMX20_00807 -2.6 -5.1 Pyruvate dehydrogenase E1 component compare
MPMX20_03683 -2.5 -6.2 RecBCD enzyme subunit RecB compare
MPMX20_00105 -2.5 -16.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01552 -2.5 -8.8 hypothetical protein compare
MPMX20_02896 -2.4 -17.5 Lysozyme RrrD compare
MPMX20_04641 -2.4 -3.8 Phosphate transport system permease protein PstA compare
MPMX20_02885 -2.4 -15.7 hypothetical protein compare
MPMX20_03021 -2.3 -12.2 hypothetical protein compare
MPMX20_01369 -2.3 -11.8 Tol-Pal system protein TolB compare
MPMX20_02766 -2.2 -5.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02574 -2.2 -4.5 putative intracellular septation protein A compare
MPMX20_02767 -2.2 -7.6 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04443 -2.2 -2.8 Sec-independent protein translocase protein TatB compare
MPMX20_03753 -2.2 -7.7 Tyrosine recombinase XerD compare
MPMX20_02891 -2.2 -15.6 hypothetical protein compare
MPMX20_03408 -2.2 -2.9 Co-chaperone protein HscB compare
MPMX20_04626 -2.2 -4.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01370 -2.1 -8.2 Peptidoglycan-associated lipoprotein compare
MPMX20_02886 -2.1 -16.6 hypothetical protein compare
MPMX20_01030 -2.1 -9.8 Lon protease compare
MPMX20_03017 -2.1 -14.5 hypothetical protein compare
MPMX20_01355 -2.1 -1.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03382 -2.1 -1.4 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04463 -2.1 -6.6 DNA helicase II compare
MPMX20_03409 -2.1 -4.1 Iron-binding protein IscA compare
MPMX20_01607 -2.1 -6.3 Outer membrane protein A compare
MPMX20_02879 -2.1 -5.5 hypothetical protein compare
MPMX20_00570 -2.1 -13.3 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02884 -2.1 -17.4 hypothetical protein compare
MPMX20_02890 -2.0 -15.6 hypothetical protein compare
MPMX20_03309 -2.0 -3.4 Phosphocarrier protein HPr compare
MPMX20_02892 -2.0 -14.9 hypothetical protein compare
MPMX20_02475 -2.0 -6.8 Putrescine export system permease protein SapB compare
MPMX20_04375 -2.0 -9.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02919 -2.0 -11.6 hypothetical protein compare
MPMX20_02903 -2.0 -9.4 hypothetical protein compare
MPMX20_04469 -1.9 -4.1 Adenylate cyclase compare
MPMX20_02888 -1.9 -10.9 hypothetical protein compare
MPMX20_01097 -1.9 -7.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04465 -1.9 -6.7 Tyrosine recombinase XerC compare
MPMX20_04601 -1.9 -2.6 DNA polymerase I compare
MPMX20_02895 -1.9 -11.6 hypothetical protein compare
MPMX20_04595 -1.9 -2.9 Glutamine synthetase compare
MPMX20_02920 -1.9 -12.5 hypothetical protein compare
MPMX20_02901 -1.9 -13.4 hypothetical protein compare
MPMX20_03020 -1.9 -8.2 hypothetical protein compare
MPMX20_02898 -1.9 -12.8 hypothetical protein compare
MPMX20_02889 -1.9 -13.8 hypothetical protein compare
MPMX20_04374 -1.8 -4.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00453 -1.8 -3.0 RNA-binding protein Hfq compare
MPMX20_02869 -1.8 -16.3 hypothetical protein compare
MPMX20_02020 -1.8 -10.9 Mannose-6-phosphate isomerase compare
MPMX20_02883 -1.8 -12.7 hypothetical protein compare
MPMX20_02880 -1.8 -14.7 hypothetical protein compare
MPMX20_01901 -1.8 -3.8 Integration host factor subunit alpha compare
MPMX20_03015 -1.8 -15.7 Phosphoglucosamine mutase compare
MPMX20_03016 -1.7 -15.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02928 -1.7 -5.5 hypothetical protein compare
MPMX20_02894 -1.7 -7.0 hypothetical protein compare
MPMX20_04489 -1.7 -13.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02878 -1.7 -9.5 hypothetical protein compare
MPMX20_02902 -1.7 -11.7 Serine/threonine-protein phosphatase 1 compare
MPMX20_02864 -1.7 -9.4 hypothetical protein compare
MPMX20_01596 -1.6 -13.2 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00226 -1.6 -8.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02930 -1.6 -10.2 hypothetical protein compare
MPMX20_04197 -1.6 -6.2 Trk system potassium uptake protein TrkA compare
MPMX20_00388 -1.6 -1.6 hypothetical protein compare
MPMX20_02927 -1.6 -10.4 hypothetical protein compare
MPMX20_02882 -1.6 -11.9 hypothetical protein compare
MPMX20_02926 -1.6 -5.0 hypothetical protein compare
MPMX20_02925 -1.6 -13.8 hypothetical protein compare
MPMX20_04640 -1.6 -3.3 Phosphate transport system permease protein PstC compare
MPMX20_01765 -1.6 -5.4 Ribonuclease E compare
MPMX20_01549 -1.5 -1.7 ATP-binding/permease protein CydD compare
MPMX20_02874 -1.5 -13.6 hypothetical protein compare
MPMX20_01354 -1.5 -2.8 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02866 -1.5 -12.6 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_02768 -1.5 -3.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02871 -1.5 -11.3 hypothetical protein compare
MPMX20_04444 -1.5 -1.6 Sec-independent protein translocase protein TatA compare
MPMX20_02887 -1.5 -6.7 hypothetical protein compare
MPMX20_02876 -1.5 -10.2 hypothetical protein compare
MPMX20_02877 -1.5 -9.8 hypothetical protein compare
MPMX20_02862 -1.5 -11.0 hypothetical protein compare
MPMX20_01353 -1.5 -4.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03440 -1.5 -4.6 Elongation factor 4 compare
MPMX20_02870 -1.5 -13.4 hypothetical protein compare
MPMX20_02701 -1.5 -2.8 Fatty acid metabolism regulator protein compare
MPMX20_03756 -1.5 -4.1 FAD assembly factor SdhE compare
MPMX20_04393 -1.5 -6.3 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_00720 -1.5 -3.1 Chaperone protein DnaK compare
MPMX20_02860 -1.5 -11.4 hypothetical protein compare
MPMX20_02861 -1.5 -10.3 hypothetical protein compare
MPMX20_02867 -1.5 -9.6 hypothetical protein compare
MPMX20_02875 -1.5 -11.0 hypothetical protein compare
MPMX20_02893 -1.5 -8.9 hypothetical protein compare
MPMX20_02635 -1.5 -2.2 Release factor glutamine methyltransferase compare
MPMX20_02924 -1.5 -9.0 hypothetical protein compare
MPMX20_02931 -1.4 -8.7 hypothetical protein compare
MPMX20_02915 -1.4 -11.4 hypothetical protein compare
MPMX20_02863 -1.4 -12.3 hypothetical protein compare
MPMX20_03154 -1.4 -9.7 Inner membrane protein YejM compare
MPMX20_02907 -1.4 -9.2 hypothetical protein compare
MPMX20_00197 -1.4 -1.9 tRNA-Tyr compare
MPMX20_02905 -1.4 -8.9 hypothetical protein compare
MPMX20_04650 -1.4 -3.9 tRNA modification GTPase MnmE compare
MPMX20_02868 -1.4 -10.5 Protein UmuD compare
MPMX20_02918 -1.4 -4.9 hypothetical protein compare
MPMX20_00258 -1.4 -5.0 Diacylglycerol kinase compare
MPMX20_01550 -1.4 -2.3 Thioredoxin reductase compare
MPMX20_01570 -1.4 -3.7 Integration host factor subunit beta compare
MPMX20_02872 -1.4 -6.5 hypothetical protein compare
MPMX20_02908 -1.4 -8.4 hypothetical protein compare
MPMX20_04518 -1.4 -5.4 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01098 -1.4 -5.0 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02916 -1.4 -7.9 hypothetical protein compare
MPMX20_02881 -1.3 -4.5 hypothetical protein compare
MPMX20_01741 -1.3 -3.8 Dihydroorotase compare
MPMX20_02873 -1.3 -9.2 hypothetical protein compare
MPMX20_04275 -1.3 -2.7 Ribulose-phosphate 3-epimerase compare
MPMX20_02897 -1.3 -5.6 hypothetical protein compare
MPMX20_03355 -1.3 -6.6 Phosphoribosylglycinamide formyltransferase compare
MPMX20_02494 -1.2 -4.5 Orotidine 5'-phosphate decarboxylase compare
MPMX20_02645 -1.2 -6.1 Ribosome-binding ATPase YchF compare
MPMX20_00480 -1.2 -2.3 50S ribosomal protein L9 compare
MPMX20_00093 -1.2 -5.9 Orotate phosphoribosyltransferase compare
MPMX20_02909 -1.2 -7.4 hypothetical protein compare
MPMX20_00134 -1.2 -5.4 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_03338 -1.2 -4.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02576 -1.2 -3.5 Protein TonB compare
MPMX20_01028 -1.2 -2.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00745 -1.2 -3.2 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02929 -1.2 -5.1 hypothetical protein compare
MPMX20_03354 -1.2 -6.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00455 -1.2 -7.3 Modulator of FtsH protease HflK compare
MPMX20_04532 -1.2 -2.2 Met repressor compare
MPMX20_04276 -1.2 -4.7 DNA adenine methylase compare
MPMX20_04668 -1.2 -3.4 hypothetical protein compare
MPMX20_03580 -1.2 -4.2 Protein RecA compare
MPMX20_04309 -1.2 -5.3 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_04110 -1.2 -3.6 Nitrogen regulatory protein compare
MPMX20_01768 -1.1 -3.0 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02906 -1.1 -7.6 hypothetical protein compare
MPMX20_02204 -1.1 -4.6 hypothetical protein compare
MPMX20_03850 -1.1 -4.7 Biopolymer transport protein ExbD compare
MPMX20_03490 -1.1 -4.9 SsrA-binding protein compare
MPMX20_01942 -1.1 -5.9 HTH-type transcriptional repressor BluR compare
MPMX20_01352 -1.1 -5.9 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00107 -1.1 -4.8 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_03742 -1.1 -6.2 HTH-type transcriptional regulator GalR compare
MPMX20_01351 -1.1 -3.3 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04140 -1.1 -6.0 Malate dehydrogenase compare
MPMX20_04170 -1.1 -2.7 DNA-binding protein Fis compare
MPMX20_03248 -1.1 -3.1 Colicin V production protein compare
MPMX20_02921 -1.0 -6.5 hypothetical protein compare
MPMX20_04467 -1.0 -5.3 Diaminopimelate epimerase compare
MPMX20_04301 -1.0 -2.4 Fe/S biogenesis protein NfuA compare
MPMX20_00544 -1.0 -4.4 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03463 -1.0 -4.3 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_02478 -1.0 -5.4 Putrescine export system ATP-binding protein SapF compare
MPMX20_01073 -1.0 -3.0 Nucleoid-associated protein YbaB compare
MPMX20_03214 -1.0 -5.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_03479 -1.0 -1.7 30S ribosomal protein S16 compare
MPMX20_03509 -1.0 -1.2 hypothetical protein compare
MPMX20_01356 -1.0 -5.2 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04639 -1.0 -1.6 Phosphate-binding protein PstS compare
MPMX20_03153 -1.0 -2.1 hypothetical protein compare
MPMX20_01548 -1.0 -1.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04686 -1.0 -3.0 Phospholipase D compare
MPMX20_01734 -0.9 -6.3 Lipid A biosynthesis lauroyltransferase compare
MPMX20_02917 -0.9 -3.5 hypothetical protein compare
MPMX20_00419 -0.9 -6.7 Aspartate ammonia-lyase compare
MPMX20_03426 -0.9 -6.9 Phosphoribosylformylglycinamidine synthase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Rhizobium pusense TBS_045 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct across organisms