Experiment set3S501 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Streptomyces ambofaciens SAI_104 grown in LB

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_00441 +1.0 2.0 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04467 +1.0 6.3 Diaminopimelate epimerase compare
MPMX20_03385 +0.8 5.0 hypothetical protein compare
MPMX20_01306 +0.7 4.7 Glutamate/aspartate import solute-binding protein compare
MPMX20_04714 +0.6 6.1 hypothetical protein compare
MPMX20_04572 +0.6 3.1 hypothetical protein compare
MPMX20_04272 +0.6 1.4 hypothetical protein compare
MPMX20_03880 +0.6 3.4 hypothetical protein compare
MPMX20_03116 +0.6 4.8 hypothetical protein compare
MPMX20_03301 +0.6 1.8 hypothetical protein compare
MPMX20_01291 +0.6 4.1 D-alanyl-D-alanine carboxypeptidase DacA compare
MPMX20_01118 +0.6 0.9 hypothetical protein compare
MPMX20_02757 +0.5 2.1 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_02946 +0.5 2.1 Flagellar biosynthetic protein FliQ compare
MPMX20_02033 +0.5 3.8 Universal stress protein E compare
MPMX20_02687 +0.5 2.8 HTH-type transcriptional regulator CdhR compare
MPMX20_02634 +0.5 2.1 Protein YchQ compare
MPMX20_04517 +0.5 3.1 HTH-type transcriptional repressor FabR compare
MPMX20_04642 +0.5 0.9 Phosphate import ATP-binding protein PstB compare
MPMX20_01305 +0.5 3.1 Glutamate/aspartate import permease protein GltJ compare
MPMX20_01752 +0.5 2.7 Flagellar basal body rod protein FlgB compare
MPMX20_01648 +0.5 1.9 hypothetical protein compare
MPMX20_04712 +0.5 4.6 Pilin compare
MPMX20_01730 +0.5 4.2 Glucans biosynthesis glucosyltransferase H compare
MPMX20_00708 +0.5 1.7 Aerobic respiration control protein ArcA compare
MPMX20_04253 +0.5 0.9 Malonate decarboxylase acyl carrier protein compare
MPMX20_04324 +0.5 2.3 putative protein YhhA compare
MPMX20_03629 +0.5 1.6 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03135 +0.5 1.3 hypothetical protein compare
MPMX20_04486 +0.4 3.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MPMX20_03344 +0.4 3.4 Beta-barrel assembly-enhancing protease compare
MPMX20_04487 +0.4 3.0 UDP-N-acetylglucosamine 2-epimerase compare
MPMX20_01758 +0.4 2.5 Flagellar L-ring protein compare
MPMX20_04085 +0.4 2.0 Transcription elongation factor GreA compare
MPMX20_01304 +0.4 2.8 Glutamate/aspartate import permease protein GltK compare
MPMX20_04344 +0.4 1.2 hypothetical protein compare
MPMX20_04710 +0.4 3.8 hypothetical protein compare
MPMX20_04040 +0.4 1.4 PTS system fructose-specific EIIB component compare
MPMX20_04685 +0.4 2.5 hypothetical protein compare
MPMX20_03687 +0.4 1.7 hypothetical protein compare
MPMX20_01987 +0.4 2.4 HTH-type transcriptional repressor NemR compare
MPMX20_01303 +0.4 1.9 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_00728 +0.4 0.6 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_04270 +0.4 1.6 Nitrite reductase (NADH) small subunit compare
MPMX20_03591 +0.4 2.6 Glucitol operon repressor compare
MPMX20_03040 +0.4 2.4 Serine acetyltransferase compare
MPMX20_02035 +0.4 2.3 Fumarate and nitrate reduction regulatory protein compare
MPMX20_02393 +0.4 0.6 hypothetical protein compare
MPMX20_04052 +0.4 1.9 hypothetical protein compare
MPMX20_01543 +0.4 1.2 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_04480 +0.4 2.4 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_04759 +0.4 1.9 IS3 family transposase ISYen3 compare
MPMX20_01729 +0.4 3.1 Glucans biosynthesis protein G compare
MPMX20_02515 +0.4 1.8 Alcohol dehydrogenase compare
MPMX20_01098 +0.4 2.0 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01942 +0.4 2.2 HTH-type transcriptional repressor BluR compare
MPMX20_04171 +0.4 1.4 hypothetical protein compare
MPMX20_00764 +0.4 0.8 hypothetical protein compare
MPMX20_01438 +0.4 1.9 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_04112 +0.4 1.1 Phosphocarrier protein NPr compare
MPMX20_04298 +0.3 1.5 hypothetical protein compare
MPMX20_01751 +0.3 2.4 Flagella basal body P-ring formation protein FlgA compare
MPMX20_01478 +0.3 1.7 Deoxyribose operon repressor compare
MPMX20_03240 +0.3 1.8 hypothetical protein compare
MPMX20_01753 +0.3 2.6 Flagellar basal-body rod protein FlgC compare
MPMX20_03626 +0.3 2.0 hypothetical protein compare
MPMX20_01756 +0.3 2.2 Flagellar basal-body rod protein FlgF compare
MPMX20_02254 +0.3 1.6 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_01045 +0.3 2.2 putative lipoprotein YbaY compare
MPMX20_03746 +0.3 1.7 tRNA-Gly compare
MPMX20_02143 +0.3 1.3 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_04282 +0.3 1.6 hypothetical protein compare
MPMX20_02944 +0.3 2.2 Flagellar protein FliO compare
MPMX20_04288 +0.3 1.5 Heat shock protein 15 compare
MPMX20_04159 +0.3 2.1 putative acrylyl-CoA reductase AcuI compare
MPMX20_04352 +0.3 2.2 hypothetical protein compare
MPMX20_01071 +0.3 1.9 Adenine phosphoribosyltransferase compare
MPMX20_03424 +0.3 1.9 Quorum-sensing regulator protein G compare
MPMX20_03043 +0.3 1.8 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_01866 +0.3 1.4 Arginine N-succinyltransferase compare
MPMX20_04501 +0.3 1.7 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_04597 +0.3 2.1 DNA-binding transcriptional regulator NtrC compare
MPMX20_02801 +0.3 2.2 Flagellar transcriptional regulator FlhC compare
MPMX20_03303 +0.3 1.8 hypothetical protein compare
MPMX20_01465 +0.3 1.9 Fructose-6-phosphate aldolase 1 compare
MPMX20_04154 +0.3 1.6 dTTP/UTP pyrophosphatase compare
MPMX20_00772 +0.3 2.2 Acetolactate synthase isozyme 3 small subunit compare
MPMX20_03239 +0.3 1.7 Epimerase family protein compare
MPMX20_02258 +0.3 1.4 hypothetical protein compare
MPMX20_04059 +0.3 1.6 hypothetical protein compare
MPMX20_02275 +0.3 0.9 Acetyltransferase compare
MPMX20_04436 +0.3 2.1 Fatty acid oxidation complex subunit alpha compare
MPMX20_03423 +0.3 2.0 Transcriptional regulatory protein QseF compare
MPMX20_02775 +0.3 1.1 Carboxy-S-adenosyl-L-methionine synthase compare
MPMX20_01768 +0.3 1.0 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01749 +0.3 1.9 Flagella synthesis protein FlgN compare
MPMX20_01791 +0.3 1.5 hypothetical protein compare
MPMX20_02939 +0.3 1.6 Flagellar FliJ protein compare
MPMX20_01125 +0.3 2.3 Putative nucleoside transporter YegT compare
MPMX20_03377 +0.3 0.8 hypothetical protein compare
MPMX20_01985 +0.3 1.9 Lactoylglutathione lyase compare
MPMX20_04561 +0.3 1.7 HTH-type transcriptional activator RhaR compare
MPMX20_03241 +0.3 1.8 Histidine transport ATP-binding protein HisP compare
MPMX20_02374 +0.3 2.2 Putative transporter AraJ compare
MPMX20_03501 +0.3 2.2 L-arabinolactonase compare
MPMX20_04647 +0.3 1.3 hypothetical protein compare
MPMX20_01509 +0.3 1.5 hypothetical protein compare
MPMX20_01914 +0.3 1.4 Hemin import ATP-binding protein HmuV compare
MPMX20_03030 +0.3 1.8 Phosphomannomutase/phosphoglucomutase compare
MPMX20_02208 +0.3 1.2 Transcriptional repressor FrmR compare
MPMX20_02085 +0.3 1.5 hypothetical protein compare
MPMX20_02945 +0.3 2.1 Flagellar biosynthetic protein FliP compare
MPMX20_01858 +0.3 1.1 Inner membrane protein YnjF compare
MPMX20_02854 +0.3 2.2 Flagellin compare
MPMX20_04412 +0.3 2.1 Protein YhjJ compare
MPMX20_04318 +0.3 1.7 Thermoresistant gluconokinase compare
MPMX20_01412 +0.3 1.1 Cyclic pyranopterin monophosphate synthase compare
MPMX20_02026 +0.3 1.8 Transcriptional regulatory protein RstA compare
MPMX20_03494 +0.3 1.4 Homoserine/homoserine lactone efflux protein compare
MPMX20_01809 +0.3 1.6 50S ribosomal protein L16 3-hydroxylase compare
MPMX20_03247 +0.3 1.5 Amidophosphoribosyltransferase compare
MPMX20_01732 +0.3 1.4 hypothetical protein compare
MPMX20_02795 +0.3 1.6 hypothetical protein compare
MPMX20_02261 +0.3 2.0 hypothetical protein compare
MPMX20_00810 +0.3 1.3 hypothetical protein compare
MPMX20_03964 +0.3 1.9 hypothetical protein compare
MPMX20_03262 +0.3 1.6 putative membrane transporter protein YfcA compare
MPMX20_02080 +0.3 1.9 Allophanate hydrolase compare
MPMX20_03284 +0.3 1.9 L-glyceraldehyde 3-phosphate reductase compare
MPMX20_03139 +0.3 1.6 Zinc-binding GTPase YeiR compare
MPMX20_01247 +0.3 1.5 Isochorismate synthase EntC compare
MPMX20_03339 +0.3 1.6 Outer membrane protein assembly factor BamC compare
MPMX20_03721 +0.3 1.2 hypothetical protein compare
MPMX20_00982 +0.3 1.7 Recombination-associated protein RdgC compare
MPMX20_02066 +0.3 2.1 Osmoprotectant import ATP-binding protein OsmV compare
MPMX20_02941 +0.3 1.8 hypothetical protein compare
MPMX20_02942 +0.3 1.9 Flagellar motor switch protein FliM compare
MPMX20_03083 +0.3 1.6 Adenine permease AdeQ compare
MPMX20_01755 +0.3 2.1 Flagellar hook protein FlgE compare
MPMX20_04482 +0.3 1.7 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_01584 +0.3 2.1 hypothetical protein compare
MPMX20_04525 +0.3 1.4 HTH-type transcriptional activator RhaR compare
MPMX20_02953 +0.3 1.2 hypothetical protein compare
MPMX20_04065 +0.2 1.8 Tryptophan-specific transport protein compare
MPMX20_01616 +0.2 0.6 Heat shock protein HspQ compare
MPMX20_00236 +0.2 1.8 hypothetical protein compare
MPMX20_03952 +0.2 1.6 hypothetical protein compare
MPMX20_04547 +0.2 1.5 hypothetical protein compare
MPMX20_00295 +0.2 1.4 Formate dehydrogenase H compare
MPMX20_01819 +0.2 1.7 Ribosomal large subunit pseudouridine synthase E compare
MPMX20_04348 +0.2 1.2 hypothetical protein compare
MPMX20_03178 +0.2 2.0 Sensor histidine kinase RcsC compare
MPMX20_04041 +0.2 1.3 N-acetylgalactosamine permease IIC component 1 compare
MPMX20_02577 +0.2 1.9 Protein YciI compare
MPMX20_04484 +0.2 1.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_02910 +0.2 1.8 hypothetical protein compare
MPMX20_02784 +0.2 2.0 Flagellar biosynthetic protein FlhB compare
MPMX20_01606 +0.2 1.3 Macrodomain Ter protein compare
MPMX20_04622 +0.2 1.9 Protein ViaA compare
MPMX20_02732 +0.2 0.8 PhoP/PhoQ regulator MgrB compare
MPMX20_03285 +0.2 0.5 hypothetical protein compare
MPMX20_02787 +0.2 1.1 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX20_00671 +0.2 1.4 [Ribosomal protein S18]-alanine N-acetyltransferase compare
MPMX20_02283 +0.2 1.9 Protein DipZ compare
MPMX20_01016 +0.2 1.4 2-dehydropantoate 2-reductase compare
MPMX20_03387 +0.2 1.1 hypothetical protein compare
MPMX20_02783 +0.2 1.8 Flagellar biosynthesis protein FlhA compare
MPMX20_01811 +0.2 1.8 Transcriptional regulatory protein PhoP compare
MPMX20_00965 +0.2 2.0 Peptide antibiotic transporter SbmA compare
MPMX20_01863 +0.2 1.6 hypothetical protein compare
MPMX20_00424 +0.2 1.7 hypothetical protein compare
MPMX20_04060 +0.2 0.9 hypothetical protein compare
MPMX20_01097 +0.2 1.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02911 +0.2 2.1 hypothetical protein compare
MPMX20_04023 +0.2 1.1 hypothetical protein compare
MPMX20_02553 +0.2 1.6 putative oxidoreductase compare
MPMX20_04761 +0.2 1.2 IS3 family transposase IS1222 compare
MPMX20_03899 +0.2 0.8 Urease subunit gamma compare
MPMX20_03968 +0.2 1.3 hypothetical protein compare
MPMX20_01481 +0.2 1.5 Multidrug transporter MdfA compare
MPMX20_01406 +0.2 1.8 ATP-dependent dethiobiotin synthetase BioD 1 compare
MPMX20_01832 +0.2 1.2 hypothetical protein compare
MPMX20_03785 +0.2 1.1 L-aspartate dehydrogenase compare
MPMX20_01143 +0.2 1.5 Putative glutamate--cysteine ligase 2 compare
MPMX20_01448 +0.2 1.7 Inner membrane protein YbiR compare
MPMX20_03779 +0.2 1.4 D-erythrose-4-phosphate dehydrogenase compare
MPMX20_02774 +0.2 1.4 Inner membrane protein YecN compare
MPMX20_04230 +0.2 1.3 Bacterioferritin compare
MPMX20_01843 +0.2 1.5 Putative glucose-6-phosphate 1-epimerase compare
MPMX20_00009 +0.2 1.2 putative 2-dehydro-3-deoxygalactonokinase DgoK1 compare
MPMX20_00450 +0.2 1.8 N-acetylmuramoyl-L-alanine amidase AmiB compare
MPMX20_01284 +0.2 1.3 Putative fluoride ion transporter CrcB compare
MPMX20_04709 +0.2 1.9 hypothetical protein compare
MPMX20_00467 +0.2 1.6 hypothetical protein compare
MPMX20_02847 +0.2 1.8 RNA polymerase sigma factor FliA compare
MPMX20_03199 +0.2 1.2 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
MPMX20_00677 +0.2 1.5 putative metal-dependent hydrolase YjjV compare
MPMX20_01646 +0.2 1.4 hypothetical protein compare
MPMX20_02395 +0.2 1.5 Glutathione S-transferase GST-6.0 compare
MPMX20_04543 +0.2 1.6 Glycerol kinase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Streptomyces ambofaciens SAI_104 grown in LB across organisms