Experiment set3S498 for Enterobacter sp. TBS_079

Compare to:

mutant library grown in Supernatant; Rhizobium pusense TBS_045 grown in LB

200 most important genes:

  gene name fitness t score description  
MPMX20_01366 -7.3 -8.6 Tol-Pal system protein TolQ compare
MPMX20_01368 -6.8 -10.3 hypothetical protein compare
MPMX20_04768 -6.5 -36.1 hypothetical protein compare
MPMX20_01367 -6.2 -13.1 Tol-Pal system protein TolR compare
MPMX20_01369 -6.0 -16.8 Tol-Pal system protein TolB compare
MPMX20_01370 -5.3 -8.0 Peptidoglycan-associated lipoprotein compare
MPMX20_01950 -5.1 -12.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04440 -5.1 -3.5 Transcription antitermination protein RfaH compare
MPMX20_03022 -4.7 -5.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01901 -4.6 -4.4 Integration host factor subunit alpha compare
MPMX20_04483 -4.6 -3.2 Lipid III flippase compare
MPMX20_03010 -4.6 -8.7 UDP-glucose 4-epimerase compare
MPMX20_03018 -4.5 -8.6 hypothetical protein compare
MPMX20_04442 -4.3 -8.9 Sec-independent protein translocase protein TatC compare
MPMX20_04530 -4.2 -13.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03338 -4.1 -8.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01354 -3.9 -5.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01098 -3.6 -8.5 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03207 -3.5 -7.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_03019 -3.5 -23.4 hypothetical protein compare
MPMX20_00106 -3.4 -11.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02576 -3.4 -5.9 Protein TonB compare
MPMX20_04140 -3.3 -12.6 Malate dehydrogenase compare
MPMX20_03211 -3.3 -7.6 NADH-quinone oxidoreductase subunit I compare
MPMX20_00226 -3.2 -13.8 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03218 -3.2 -6.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03212 -3.2 -7.5 NADH-quinone oxidoreductase subunit H compare
MPMX20_01355 -3.2 -2.2 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03209 -3.2 -4.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_03685 -3.1 -5.9 RecBCD enzyme subunit RecC compare
MPMX20_03683 -3.1 -5.8 RecBCD enzyme subunit RecB compare
MPMX20_00807 -3.1 -4.6 Pyruvate dehydrogenase E1 component compare
MPMX20_03210 -3.1 -8.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_04443 -3.1 -4.2 Sec-independent protein translocase protein TatB compare
MPMX20_03247 -3.0 -7.3 Amidophosphoribosyltransferase compare
MPMX20_03214 -3.0 -12.3 NADH-quinone oxidoreductase subunit F compare
MPMX20_01362 -3.0 -2.9 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03986 -3.0 -5.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01350 -3.0 -4.6 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03206 -3.0 -12.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_03426 -3.0 -17.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_02768 -3.0 -7.1 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00773 -3.0 -15.0 Catabolite repressor/activator compare
MPMX20_00514 -2.9 -8.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_00225 -2.9 -13.0 Phosphoribosylamine--glycine ligase compare
MPMX20_04110 -2.9 -7.7 Nitrogen regulatory protein compare
MPMX20_01607 -2.9 -9.3 Outer membrane protein A compare
MPMX20_01097 -2.8 -9.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03154 -2.8 -17.2 Inner membrane protein YejM compare
MPMX20_01361 -2.8 -6.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03354 -2.7 -11.0 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_02879 -2.7 -8.2 hypothetical protein compare
MPMX20_00109 -2.7 -21.7 hypothetical protein compare
MPMX20_00831 -2.7 -7.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_04444 -2.7 -2.0 Sec-independent protein translocase protein TatA compare
MPMX20_02885 -2.6 -15.9 hypothetical protein compare
MPMX20_04489 -2.6 -20.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04469 -2.6 -3.9 Adenylate cyclase compare
MPMX20_01352 -2.6 -12.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01552 -2.6 -9.1 hypothetical protein compare
MPMX20_01570 -2.6 -6.1 Integration host factor subunit beta compare
MPMX20_00110 -2.6 -19.9 hypothetical protein compare
MPMX20_03021 -2.6 -14.0 hypothetical protein compare
MPMX20_03208 -2.5 -8.2 NADH-quinone oxidoreductase subunit L compare
MPMX20_03217 -2.5 -6.3 NADH-quinone oxidoreductase subunit B compare
MPMX20_03017 -2.5 -14.6 hypothetical protein compare
MPMX20_03382 -2.5 -1.7 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00102 -2.5 -3.6 hypothetical protein compare
MPMX20_03267 -2.4 -4.6 Phosphohistidine phosphatase SixA compare
MPMX20_00108 -2.4 -19.7 hypothetical protein compare
MPMX20_02869 -2.4 -21.8 hypothetical protein compare
MPMX20_03216 -2.4 -12.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02890 -2.4 -17.6 hypothetical protein compare
MPMX20_02672 -2.4 -20.0 hypothetical protein compare
MPMX20_02884 -2.4 -17.7 hypothetical protein compare
MPMX20_04374 -2.4 -5.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02891 -2.4 -18.7 hypothetical protein compare
MPMX20_03020 -2.4 -9.5 hypothetical protein compare
MPMX20_04119 -2.4 -4.5 DNA polymerase III subunit chi compare
MPMX20_01351 -2.4 -5.1 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02886 -2.4 -19.6 hypothetical protein compare
MPMX20_00419 -2.3 -14.9 Aspartate ammonia-lyase compare
MPMX20_03310 -2.3 -7.4 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04641 -2.3 -3.7 Phosphate transport system permease protein PstA compare
MPMX20_02892 -2.3 -16.6 hypothetical protein compare
MPMX20_02898 -2.3 -15.9 hypothetical protein compare
MPMX20_01030 -2.3 -10.3 Lon protease compare
MPMX20_03213 -2.3 -11.1 NADH-quinone oxidoreductase subunit G compare
MPMX20_02901 -2.3 -16.6 hypothetical protein compare
MPMX20_02896 -2.2 -18.0 Lysozyme RrrD compare
MPMX20_00570 -2.2 -14.1 putative BsuMI modification methylase subunit YdiO compare
MPMX20_00105 -2.2 -15.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00453 -2.2 -3.2 RNA-binding protein Hfq compare
MPMX20_04518 -2.2 -7.4 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04375 -2.2 -10.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04639 -2.2 -2.1 Phosphate-binding protein PstS compare
MPMX20_03215 -2.1 -3.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_01356 -2.1 -8.7 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01029 -2.1 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03016 -2.1 -18.0 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_02020 -2.1 -12.3 Mannose-6-phosphate isomerase compare
MPMX20_02895 -2.1 -15.9 hypothetical protein compare
MPMX20_03015 -2.1 -18.1 Phosphoglucosamine mutase compare
MPMX20_02883 -2.1 -13.1 hypothetical protein compare
MPMX20_01028 -2.1 -2.9 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_02591 -2.0 -9.7 DNA-binding protein H-NS compare
MPMX20_02574 -2.0 -4.2 putative intracellular septation protein A compare
MPMX20_03409 -2.0 -4.0 Iron-binding protein IscA compare
MPMX20_02918 -2.0 -9.7 hypothetical protein compare
MPMX20_01353 -1.9 -5.4 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04465 -1.9 -8.0 Tyrosine recombinase XerC compare
MPMX20_03756 -1.9 -6.6 FAD assembly factor SdhE compare
MPMX20_02902 -1.9 -11.4 Serine/threonine-protein phosphatase 1 compare
MPMX20_02899 -1.9 -8.5 hypothetical protein compare
MPMX20_02877 -1.9 -10.1 hypothetical protein compare
MPMX20_02889 -1.9 -14.1 hypothetical protein compare
MPMX20_04463 -1.9 -7.7 DNA helicase II compare
MPMX20_02920 -1.9 -10.8 hypothetical protein compare
MPMX20_02919 -1.9 -8.8 hypothetical protein compare
MPMX20_02767 -1.9 -8.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03850 -1.8 -6.0 Biopolymer transport protein ExbD compare
MPMX20_02929 -1.8 -4.0 hypothetical protein compare
MPMX20_02871 -1.8 -9.8 hypothetical protein compare
MPMX20_01357 -1.8 -6.5 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02880 -1.8 -14.8 hypothetical protein compare
MPMX20_03753 -1.7 -8.3 Tyrosine recombinase XerD compare
MPMX20_02888 -1.7 -7.9 hypothetical protein compare
MPMX20_04595 -1.7 -2.6 Glutamine synthetase compare
MPMX20_02864 -1.7 -6.7 hypothetical protein compare
MPMX20_02882 -1.7 -13.7 hypothetical protein compare
MPMX20_03509 -1.7 -2.2 hypothetical protein compare
MPMX20_02875 -1.7 -12.1 hypothetical protein compare
MPMX20_02870 -1.7 -14.7 hypothetical protein compare
MPMX20_02908 -1.7 -9.4 hypothetical protein compare
MPMX20_02925 -1.6 -15.1 hypothetical protein compare
MPMX20_02862 -1.6 -12.2 hypothetical protein compare
MPMX20_02874 -1.6 -14.4 hypothetical protein compare
MPMX20_02866 -1.6 -13.8 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_01549 -1.6 -1.8 ATP-binding/permease protein CydD compare
MPMX20_02766 -1.6 -3.6 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03882 -1.6 -9.1 Outer membrane protein TolC compare
MPMX20_02881 -1.6 -7.0 hypothetical protein compare
MPMX20_02903 -1.6 -8.4 hypothetical protein compare
MPMX20_02927 -1.6 -7.0 hypothetical protein compare
MPMX20_03407 -1.6 -4.3 Chaperone protein HscA compare
MPMX20_02635 -1.6 -4.0 Release factor glutamine methyltransferase compare
MPMX20_02872 -1.6 -6.5 hypothetical protein compare
MPMX20_02931 -1.6 -12.3 hypothetical protein compare
MPMX20_01869 -1.6 -9.2 Succinylglutamate desuccinylase compare
MPMX20_03851 -1.6 -9.9 Biopolymer transport protein ExbB compare
MPMX20_02867 -1.6 -11.4 hypothetical protein compare
MPMX20_02861 -1.5 -10.9 hypothetical protein compare
MPMX20_02930 -1.5 -8.6 hypothetical protein compare
MPMX20_02860 -1.5 -10.4 hypothetical protein compare
MPMX20_03767 -1.5 -6.0 Xaa-Pro aminopeptidase compare
MPMX20_02876 -1.5 -7.6 hypothetical protein compare
MPMX20_02915 -1.5 -11.3 hypothetical protein compare
MPMX20_03443 -1.5 -3.7 Anti-sigma-E factor RseA compare
MPMX20_02897 -1.5 -6.2 hypothetical protein compare
MPMX20_02863 -1.5 -13.0 hypothetical protein compare
MPMX20_02873 -1.5 -10.2 hypothetical protein compare
MPMX20_01548 -1.5 -2.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03390 -1.5 -8.0 Outer membrane protein assembly factor BamB compare
MPMX20_04276 -1.5 -6.4 DNA adenine methylase compare
MPMX20_02878 -1.5 -6.5 hypothetical protein compare
MPMX20_02701 -1.5 -2.8 Fatty acid metabolism regulator protein compare
MPMX20_00197 -1.5 -3.0 tRNA-Tyr compare
MPMX20_02868 -1.4 -10.7 Protein UmuD compare
MPMX20_02887 -1.4 -4.8 hypothetical protein compare
MPMX20_04306 -1.4 -5.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_03264 -1.4 -6.1 Chorismate synthase compare
MPMX20_02928 -1.4 -5.5 hypothetical protein compare
MPMX20_01065 -1.4 -8.6 Multidrug efflux pump subunit AcrA compare
MPMX20_02924 -1.4 -11.2 hypothetical protein compare
MPMX20_01286 -1.4 -2.4 Sec-independent protein translocase protein TatE compare
MPMX20_02893 -1.4 -6.3 hypothetical protein compare
MPMX20_02905 -1.4 -9.7 hypothetical protein compare
MPMX20_01550 -1.4 -3.0 Thioredoxin reductase compare
MPMX20_02894 -1.4 -9.5 hypothetical protein compare
MPMX20_02907 -1.3 -10.6 hypothetical protein compare
MPMX20_03742 -1.3 -8.2 HTH-type transcriptional regulator GalR compare
MPMX20_04038 -1.3 -6.4 Glucitol operon repressor compare
MPMX20_02906 -1.3 -7.7 hypothetical protein compare
MPMX20_02909 -1.3 -7.1 hypothetical protein compare
MPMX20_02917 -1.3 -7.7 hypothetical protein compare
MPMX20_00801 -1.3 -5.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01349 -1.3 -5.6 Citrate synthase compare
MPMX20_04137 -1.3 -4.8 Inner membrane protein YhcB compare
MPMX20_00241 -1.3 -7.7 Glucose-6-phosphate isomerase compare
MPMX20_04111 -1.3 -6.9 RNase adapter protein RapZ compare
MPMX20_02904 -1.2 -8.3 hypothetical protein compare
MPMX20_04626 -1.2 -4.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02916 -1.2 -5.3 hypothetical protein compare
MPMX20_04197 -1.2 -5.0 Trk system potassium uptake protein TrkA compare
MPMX20_03591 -1.2 -6.9 Glucitol operon repressor compare
MPMX20_03394 -1.2 -3.3 Cytoskeleton protein RodZ compare
MPMX20_04340 -1.2 -6.1 Cell division ATP-binding protein FtsE compare
MPMX20_04650 -1.2 -3.8 tRNA modification GTPase MnmE compare
MPMX20_02825 -1.2 -3.8 Cold shock-like protein CspB compare
MPMX20_03355 -1.2 -7.1 Phosphoribosylglycinamide formyltransferase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in supernatant experiments

For supernatant Supernatant; Rhizobium pusense TBS_045 grown in LB across organisms