Experiment set3S462 for Lysobacter sp. OAE881

Compare to:

Ying_sugar7 rep C; time point 1

200 most important genes:

  gene name fitness t score description  
ABIE51_RS13305 -6.3 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE51_RS13380 -6.1 -5.8 argininosuccinate lyase compare
ABIE51_RS01280 -5.3 -6.3 lipid-binding SYLF domain-containing protein compare
ABIE51_RS05540 -5.3 -3.6 hypothetical protein compare
ABIE51_RS04310 -5.0 -6.9 glycosyltransferase compare
ABIE51_RS17580 -5.0 -5.9 3-isopropylmalate dehydratase small subunit compare
ABIE51_RS14135 -5.0 -2.0 tRNA-Val compare
ABIE51_RS17575 -4.9 -6.7 3-isopropylmalate dehydratase large subunit compare
ABIE51_RS08250 -4.7 -5.7 phosphoribosylanthranilate isomerase compare
ABIE51_RS18545 -4.6 -3.1 DUF6249 domain-containing protein compare
ABIE51_RS17095 -4.5 -16.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS09090 -4.4 -7.4 homocysteine S-methyltransferase family protein compare
ABIE51_RS13300 -4.4 -7.0 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS17540 -4.4 -8.1 dihydroxy-acid dehydratase compare
ABIE51_RS08040 -4.4 -13.8 glucose-6-phosphate isomerase compare
ABIE51_RS17550 -4.4 -6.5 acetolactate synthase 2 catalytic subunit compare
ABIE51_RS04620 -4.3 -17.0 serine hydroxymethyltransferase compare
ABIE51_RS16485 -4.3 -3.0 adenosylhomocysteinase compare
ABIE51_RS02280 -4.3 -8.2 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS18965 -4.2 -17.8 phosphoenolpyruvate carboxylase compare
ABIE51_RS15615 -4.2 -12.0 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS15890 -4.2 -6.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS14555 -4.2 -2.8 M15 family metallopeptidase compare
ABIE51_RS02220 -4.2 -6.0 DNA topoisomerase I compare
ABIE51_RS02300 -4.2 -6.9 lauroyl acyltransferase compare
ABIE51_RS13320 -4.1 -8.9 histidinol-phosphate transaminase compare
ABIE51_RS15390 -4.1 -2.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE51_RS06340 -4.1 -12.7 hypothetical protein compare
ABIE51_RS15620 -4.1 -7.9 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS13385 -4.1 -6.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE51_RS01855 -4.1 -13.0 sulfate ABC transporter substrate-binding protein compare
ABIE51_RS17585 -4.1 -9.4 3-isopropylmalate dehydrogenase compare
ABIE51_RS17630 -4.0 -8.6 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS16395 -4.0 -2.8 PDZ domain-containing protein compare
ABIE51_RS13330 -3.9 -3.2 ATP phosphoribosyltransferase compare
ABIE51_RS16190 -3.9 -14.6 homoserine O-succinyltransferase compare
ABIE51_RS13315 -3.9 -2.4 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABIE51_RS11615 -3.9 -14.2 carbamoyl-phosphate synthase large subunit compare
ABIE51_RS03940 -3.9 -8.6 response regulator transcription factor compare
ABIE51_RS17545 -3.9 -19.4 ketol-acid reductoisomerase compare
ABIE51_RS19265 -3.9 -17.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS17565 -3.9 -12.3 threonine dehydratase compare
ABIE51_RS13405 -3.8 -13.9 argininosuccinate synthase compare
ABIE51_RS17530 -3.8 -16.7 threonine synthase compare
ABIE51_RS09085 -3.8 -10.7 methionine synthase compare
ABIE51_RS17060 -3.8 -9.6 phosphoglycerate kinase compare
ABIE51_RS01845 -3.8 -7.7 sulfate ABC transporter permease subunit CysW compare
ABIE51_RS01850 -3.8 -11.2 sulfate ABC transporter permease subunit CysT compare
ABIE51_RS16490 -3.8 -21.9 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE51_RS01320 -3.8 -22.6 glutamate synthase large subunit compare
ABIE51_RS15850 -3.8 -11.7 LysR family transcriptional regulator compare
ABIE51_RS06180 -3.8 -6.3 amidophosphoribosyltransferase compare
ABIE51_RS04505 -3.8 -8.7 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS17560 -3.7 -10.5 aminotransferase class IV compare
ABIE51_RS01315 -3.7 -10.7 FAD-dependent oxidoreductase compare
ABIE51_RS13410 -3.7 -18.1 N-acetylornithine carbamoyltransferase compare
ABIE51_RS14070 -3.7 -7.9 glycosyltransferase family 9 protein compare
ABIE51_RS05275 -3.7 -10.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
ABIE51_RS15855 -3.7 -5.5 siroheme synthase CysG compare
ABIE51_RS12145 -3.7 -15.6 prephenate dehydratase compare
ABIE51_RS17520 -3.7 -12.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABIE51_RS01635 -3.7 -7.4 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS17355 -3.7 -9.4 5-formyltetrahydrofolate cyclo-ligase compare
ABIE51_RS15830 -3.7 -10.5 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
ABIE51_RS17715 -3.7 -9.1 type II 3-dehydroquinate dehydratase compare
ABIE51_RS17760 -3.6 -9.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE51_RS04125 -3.6 -7.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE51_RS09065 -3.6 -11.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS12150 -3.6 -15.6 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABIE51_RS15955 -3.6 -21.7 RNA polymerase factor sigma-54 compare
ABIE51_RS13325 -3.6 -12.0 histidinol dehydrogenase compare
ABIE51_RS15820 -3.6 -14.3 sulfate adenylyltransferase subunit CysD compare
ABIE51_RS16260 -3.5 -4.2 hypothetical protein compare
ABIE51_RS16420 -3.5 -8.9 TMEM165/GDT1 family protein compare
ABIE51_RS13240 -3.5 -12.7 FAD-binding oxidoreductase compare
ABIE51_RS15815 -3.5 -11.8 sulfate adenylyltransferase subunit CysN compare
ABIE51_RS06000 -3.5 -12.2 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS17555 -3.5 -2.8 ACT domain-containing protein compare
ABIE51_RS02450 -3.5 -6.6 MarR family transcriptional regulator compare
ABIE51_RS01610 -3.5 -10.6 phosphogluconate dehydratase compare
ABIE51_RS03160 -3.5 -20.6 septal ring lytic transglycosylase RlpA family protein compare
ABIE51_RS05975 -3.5 -9.9 class II 3-deoxy-7-phosphoheptulonate synthase compare
ABIE51_RS03165 -3.4 -26.9 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS09365 -3.4 -4.1 glycosyltransferase family 4 protein compare
ABIE51_RS16185 -3.4 -10.9 O-succinylhomoserine (thiol)-lyase compare
ABIE51_RS13395 -3.4 -4.0 acetylglutamate kinase compare
ABIE51_RS09045 -3.4 -6.8 GntR family transcriptional regulator compare
ABIE51_RS01630 -3.4 -13.8 SIS domain-containing protein compare
ABIE51_RS15835 -3.4 -11.5 phosphoadenylyl-sulfate reductase compare
ABIE51_RS01815 -3.3 -3.9 shikimate dehydrogenase compare
ABIE51_RS00635 -3.3 -5.5 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS04150 -3.3 -17.6 anthranilate synthase component I compare
ABIE51_RS08260 -3.3 -12.4 tryptophan synthase subunit beta compare
ABIE51_RS00035 -3.3 -24.9 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS08265 -3.3 -12.7 tryptophan synthase subunit alpha compare
ABIE51_RS15825 -3.3 -16.4 assimilatory sulfite reductase (NADPH) flavoprotein subunit compare
ABIE51_RS06500 -3.3 -5.8 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS17260 -3.3 -10.6 RidA family protein compare
ABIE51_RS14150 -3.3 -11.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS14085 -3.2 -3.8 DUF6165 family protein compare
ABIE51_RS01100 -3.2 -10.5 alpha/beta family hydrolase compare
ABIE51_RS17525 -3.2 -12.2 homoserine kinase compare
ABIE51_RS14060 -3.2 -6.8 MBL fold metallo-hydrolase compare
ABIE51_RS05295 -3.2 -5.7 response regulator transcription factor compare
ABIE51_RS14345 -3.2 -8.7 aminomethyl-transferring glycine dehydrogenase compare
ABIE51_RS03185 -3.2 -9.9 carboxy terminal-processing peptidase compare
ABIE51_RS03265 -3.2 -9.5 trypsin-like peptidase domain-containing protein compare
ABIE51_RS16065 -3.2 -8.1 pyrroline-5-carboxylate reductase compare
ABIE51_RS16510 -3.2 -9.9 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS01840 -3.1 -9.7 sulfate/molybdate ABC transporter ATP-binding protein compare
ABIE51_RS04070 -3.1 -10.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE51_RS04805 -3.1 -2.1 A24 family peptidase compare
ABIE51_RS04180 -3.1 -6.8 anthranilate phosphoribosyltransferase compare
ABIE51_RS16365 -3.1 -5.5 glycine cleavage system aminomethyltransferase GcvT compare
ABIE51_RS13295 -3.1 -6.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABIE51_RS19030 -3.1 -9.6 endonuclease/exonuclease/phosphatase family protein compare
ABIE51_RS18995 -3.1 -9.1 alpha-glucosidase family protein compare
ABIE51_RS09375 -3.0 -12.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS05300 -3.0 -9.3 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS11490 -3.0 -24.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS17770 -3.0 -5.3 phosphoribosylamine--glycine ligase compare
ABIE51_RS17535 -3.0 -6.3 hypothetical protein compare
ABIE51_RS07005 -3.0 -7.1 asparagine synthase B compare
ABIE51_RS00065 -3.0 -4.8 orotate phosphoribosyltransferase compare
ABIE51_RS00925 -2.9 -17.1 phenylalanine 4-monooxygenase compare
ABIE51_RS07575 -2.9 -3.4 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS08740 -2.9 -17.2 amidohydrolase compare
ABIE51_RS13890 -2.8 -21.5 RNA polymerase sigma factor RpoE compare
ABIE51_RS04085 -2.8 -14.1 homogentisate 1,2-dioxygenase compare
ABIE51_RS17190 -2.8 -3.3 penicillin-binding protein 1A compare
ABIE51_RS09425 -2.8 -1.9 helix-turn-helix domain-containing protein compare
ABIE51_RS05170 -2.7 -19.2 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE51_RS05180 -2.7 -8.0 glycosyltransferase compare
ABIE51_RS13365 -2.7 -6.5 glutamate-5-semialdehyde dehydrogenase compare
ABIE51_RS13245 -2.7 -4.3 phosphoglycerate dehydrogenase compare
ABIE51_RS10930 -2.7 -2.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE51_RS11510 -2.7 -18.3 tRNA 2-thiouridine(34) synthase MnmA compare
ABIE51_RS16015 -2.6 -3.1 aspartate carbamoyltransferase catalytic subunit compare
ABIE51_RS04190 -2.6 -3.7 indole-3-glycerol phosphate synthase TrpC compare
ABIE51_RS14155 -2.6 -8.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS05045 -2.6 -3.0 Holliday junction branch migration protein RuvA compare
ABIE51_RS15970 -2.6 -5.7 HPr(Ser) kinase/phosphatase compare
ABIE51_RS16360 -2.5 -4.2 glycine cleavage system protein GcvH compare
ABIE51_RS03155 -2.5 -14.7 lytic murein transglycosylase B compare
ABIE51_RS01360 -2.5 -3.9 nitrogen regulation protein NR(I) compare
ABIE51_RS04370 -2.5 -10.3 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABIE51_RS08540 -2.5 -17.8 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC compare
ABIE51_RS17670 -2.4 -10.6 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
ABIE51_RS14530 -2.4 -10.0 hypothetical protein compare
ABIE51_RS08535 -2.3 -10.0 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE compare
ABIE51_RS14105 -2.3 -5.6 hydroxyacylglutathione hydrolase compare
ABIE51_RS13525 -2.2 -8.2 acetoacetyl-CoA reductase compare
ABIE51_RS19105 -2.2 -11.5 pteridine reductase compare
ABIE51_RS13480 -2.2 -3.6 phytoene/squalene synthase family protein compare
ABIE51_RS11495 -2.2 -8.2 ATP-dependent Clp protease adapter ClpS compare
ABIE51_RS14090 -2.2 -6.8 PP2C family serine/threonine-protein phosphatase compare
ABIE51_RS04390 -2.2 -10.8 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS17270 -2.2 -3.1 DNA-directed RNA polymerase subunit omega compare
ABIE51_RS04245 -2.2 -5.1 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS12140 -2.2 -4.8 histidinol-phosphate transaminase compare
ABIE51_RS11790 -2.1 -12.2 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE51_RS09370 -2.1 -10.6 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS04705 -2.1 -5.1 division/cell wall cluster transcriptional repressor MraZ compare
ABIE51_RS06730 -2.1 -4.4 LPS assembly lipoprotein LptE compare
ABIE51_RS15895 -2.1 -10.3 phosphoribosylglycinamide formyltransferase compare
ABIE51_RS13370 -2.0 -1.9 glutamate 5-kinase compare
ABIE51_RS02265 -2.0 -2.1 glycosyltransferase family 2 protein compare
ABIE51_RS03945 -2.0 -14.8 ATP-binding protein compare
ABIE51_RS13540 -2.0 -9.6 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
ABIE51_RS08880 -2.0 -10.7 chromosome segregation protein SMC compare
ABIE51_RS17570 -2.0 -1.4 2-isopropylmalate synthase compare
ABIE51_RS02175 -1.9 -14.8 signal peptide peptidase SppA compare
ABIE51_RS05175 -1.9 -7.8 hypothetical protein compare
ABIE51_RS00515 -1.9 -5.4 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABIE51_RS06980 -1.9 -2.1 [protein-PII] uridylyltransferase compare
ABIE51_RS13115 -1.9 -11.1 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein compare
ABIE51_RS15990 -1.9 -3.1 PTS sugar transporter subunit IIA compare
ABIE51_RS16095 -1.9 -1.5 shikimate kinase compare
ABIE51_RS17740 -1.9 -9.5 hypothetical protein compare
ABIE51_RS14165 -1.8 -5.4 tRNA-Leu compare
ABIE51_RS04475 -1.8 -9.1 leucyl aminopeptidase compare
ABIE51_RS18475 -1.8 -4.8 HAD family phosphatase compare
ABIE51_RS04535 -1.8 -6.3 type II secretion system major pseudopilin GspG compare
ABIE51_RS15095 -1.8 -5.8 TMEM43 family protein compare
ABIE51_RS18515 -1.8 -4.2 tRNA-Leu compare
ABIE51_RS03935 -1.7 -6.4 hypothetical protein compare
ABIE51_RS04835 -1.7 -7.3 glycosyltransferase family 2 protein compare
ABIE51_RS01235 -1.7 -11.2 autotransporter assembly complex family protein compare
ABIE51_RS09340 -1.7 -5.4 (d)CMP kinase compare
ABIE51_RS04545 -1.7 -5.3 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABIE51_RS08785 -1.7 -11.3 ScpA family protein compare
ABIE51_RS05375 -1.7 -8.7 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS17515 -1.7 -13.0 phosphomethylpyrimidine synthase ThiC compare
ABIE51_RS13815 -1.6 -8.3 beta-N-acetylhexosaminidase compare
ABIE51_RS03125 -1.6 -11.7 carbohydrate kinase family protein compare
ABIE51_RS07220 -1.6 -11.4 hypothetical protein compare
ABIE51_RS11780 -1.6 -8.8 transmembrane repetitive protein compare
ABIE51_RS13885 -1.6 -2.6 sigma-E factor negative regulatory protein compare
ABIE51_RS04565 -1.6 -4.7 type II secretion system protein GspM compare
ABIE51_RS00540 -1.6 -10.7 NADP-dependent isocitrate dehydrogenase compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source Ying_sugar7 across organisms