Experiment set3S459 for Lysobacter sp. OAE881

Compare to:

Ying_all64 rep C; time point 1

200 most important genes:

  gene name fitness t score description  
ABIE51_RS01280 -5.6 -5.4 lipid-binding SYLF domain-containing protein compare
ABIE51_RS14070 -5.4 -6.4 glycosyltransferase family 9 protein compare
ABIE51_RS05540 -5.2 -3.5 hypothetical protein compare
ABIE51_RS04310 -4.8 -3.9 glycosyltransferase compare
ABIE51_RS17630 -4.7 -5.6 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS03940 -4.7 -5.6 response regulator transcription factor compare
ABIE51_RS14085 -4.5 -3.1 DUF6165 family protein compare
ABIE51_RS06340 -4.5 -11.4 hypothetical protein compare
ABIE51_RS02300 -4.4 -8.0 lauroyl acyltransferase compare
ABIE51_RS03160 -4.3 -20.0 septal ring lytic transglycosylase RlpA family protein compare
ABIE51_RS15620 -4.3 -7.1 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS01635 -4.2 -5.8 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS11490 -4.2 -26.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS16260 -4.2 -4.1 hypothetical protein compare
ABIE51_RS05300 -4.1 -8.5 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS14555 -4.1 -2.8 M15 family metallopeptidase compare
ABIE51_RS15615 -4.1 -11.7 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS13890 -3.9 -25.4 RNA polymerase sigma factor RpoE compare
ABIE51_RS04245 -3.8 -3.7 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS05295 -3.7 -4.4 response regulator transcription factor compare
ABIE51_RS19030 -3.6 -8.6 endonuclease/exonuclease/phosphatase family protein compare
ABIE51_RS03265 -3.6 -8.0 trypsin-like peptidase domain-containing protein compare
ABIE51_RS03165 -3.5 -28.0 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS05180 -3.5 -7.8 glycosyltransferase compare
ABIE51_RS13260 -3.5 -16.0 amino acid permease compare
ABIE51_RS00035 -3.5 -23.6 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS09045 -3.2 -6.7 GntR family transcriptional regulator compare
ABIE51_RS16510 -3.2 -11.8 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS06000 -3.1 -11.9 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS04805 -3.0 -2.1 A24 family peptidase compare
ABIE51_RS09065 -3.0 -10.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS17515 -3.0 -15.1 phosphomethylpyrimidine synthase ThiC compare
ABIE51_RS04505 -3.0 -8.7 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS17190 -3.0 -2.1 penicillin-binding protein 1A compare
ABIE51_RS16555 -3.0 -15.6 SLC13 family permease compare
ABIE51_RS03945 -3.0 -16.1 ATP-binding protein compare
ABIE51_RS09365 -3.0 -4.5 glycosyltransferase family 4 protein compare
ABIE51_RS03185 -3.0 -9.5 carboxy terminal-processing peptidase compare
ABIE51_RS00635 -3.0 -4.9 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS09375 -2.9 -11.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS02450 -2.8 -6.2 MarR family transcriptional regulator compare
ABIE51_RS18545 -2.8 -3.0 DUF6249 domain-containing protein compare
ABIE51_RS01630 -2.7 -12.5 SIS domain-containing protein compare
ABIE51_RS09425 -2.7 -1.9 helix-turn-helix domain-containing protein compare
ABIE51_RS10470 -2.7 -7.5 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS02280 -2.7 -7.9 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS15890 -2.6 -6.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS14050 -2.6 -4.2 cyclic pyranopterin monophosphate synthase MoaC compare
ABIE51_RS16395 -2.6 -2.7 PDZ domain-containing protein compare
ABIE51_RS03935 -2.5 -8.0 hypothetical protein compare
ABIE51_RS11495 -2.5 -6.7 ATP-dependent Clp protease adapter ClpS compare
ABIE51_RS06180 -2.5 -6.0 amidophosphoribosyltransferase compare
ABIE51_RS14155 -2.4 -8.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS08040 -2.3 -9.4 glucose-6-phosphate isomerase compare
ABIE51_RS01000 -2.3 -14.7 ABC transporter substrate-binding protein compare
ABIE51_RS17770 -2.3 -4.8 phosphoribosylamine--glycine ligase compare
ABIE51_RS14150 -2.3 -9.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS09370 -2.3 -12.0 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS03155 -2.3 -11.8 lytic murein transglycosylase B compare
ABIE51_RS09105 -2.3 -6.2 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS02220 -2.2 -7.8 DNA topoisomerase I compare
ABIE51_RS14055 -2.2 -3.8 GTP 3',8-cyclase MoaA compare
ABIE51_RS07575 -2.2 -2.9 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS15970 -2.0 -5.1 HPr(Ser) kinase/phosphatase compare
ABIE51_RS04475 -2.0 -10.3 leucyl aminopeptidase compare
ABIE51_RS08880 -2.0 -10.8 chromosome segregation protein SMC compare
ABIE51_RS14040 -2.0 -7.9 molybdenum cofactor biosynthesis protein MoaE compare
ABIE51_RS09445 -1.9 -8.7 NTP transferase domain-containing protein compare
ABIE51_RS14045 -1.9 -4.6 MoaD/ThiS family protein compare
ABIE51_RS02990 -1.9 -13.8 molybdopterin oxidoreductase family protein compare
ABIE51_RS17450 -1.9 -15.0 Mur ligase family protein compare
ABIE51_RS00990 -1.9 -11.8 VacJ family lipoprotein compare
ABIE51_RS14060 -1.8 -5.6 MBL fold metallo-hydrolase compare
ABIE51_RS17095 -1.8 -11.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS19265 -1.7 -10.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS08780 -1.7 -5.6 SMC-Scp complex subunit ScpB compare
ABIE51_RS16420 -1.7 -6.7 TMEM165/GDT1 family protein compare
ABIE51_RS04250 -1.7 -9.3 maleylacetoacetate isomerase compare
ABIE51_RS04620 -1.7 -11.7 serine hydroxymethyltransferase compare
ABIE51_RS09450 -1.7 -5.7 gephyrin-like molybdotransferase Glp compare
ABIE51_RS02980 -1.7 -6.4 4Fe-4S dicluster domain-containing protein compare
ABIE51_RS17320 -1.7 -14.3 aminopeptidase P N-terminal domain-containing protein compare
ABIE51_RS02975 -1.6 -9.1 DmsC/YnfH family molybdoenzyme membrane anchor subunit compare
ABIE51_RS06785 -1.6 -10.2 ribonuclease G compare
ABIE51_RS13300 -1.6 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS17530 -1.6 -11.0 threonine synthase compare
ABIE51_RS02265 -1.6 -2.2 glycosyltransferase family 2 protein compare
ABIE51_RS11120 -1.5 -4.5 ATP-binding cassette domain-containing protein compare
ABIE51_RS04390 -1.5 -8.2 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS08785 -1.5 -9.5 ScpA family protein compare
ABIE51_RS05045 -1.5 -2.3 Holliday junction branch migration protein RuvA compare
ABIE51_RS18995 -1.5 -7.4 alpha-glucosidase family protein compare
ABIE51_RS13315 -1.5 -3.4 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABIE51_RS19165 -1.4 -7.5 heme o synthase compare
ABIE51_RS03135 -1.4 -4.8 rod shape-determining protein MreC compare
ABIE51_RS17060 -1.4 -7.0 phosphoglycerate kinase compare
ABIE51_RS19180 -1.4 -3.9 SURF1 family protein compare
ABIE51_RS06905 -1.4 -6.5 RIP metalloprotease RseP compare
ABIE51_RS16735 -1.4 -2.6 flagellar export chaperone FliS compare
ABIE51_RS13480 -1.3 -2.6 phytoene/squalene synthase family protein compare
ABIE51_RS13305 -1.3 -2.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE51_RS17740 -1.3 -7.8 hypothetical protein compare
ABIE51_RS14530 -1.3 -8.3 hypothetical protein compare
ABIE51_RS01265 -1.3 -8.0 twin-arginine translocase subunit TatC compare
ABIE51_RS17705 -1.3 -10.1 protein-disulfide reductase DsbD compare
ABIE51_RS11115 -1.3 -3.1 molybdate ABC transporter permease subunit compare
ABIE51_RS13115 -1.3 -8.4 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein compare
ABIE51_RS09415 -1.2 -10.2 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABIE51_RS04085 -1.2 -7.9 homogentisate 1,2-dioxygenase compare
ABIE51_RS17440 -1.2 -10.4 bifunctional DedA family/phosphatase PAP2 family protein compare
ABIE51_RS17400 -1.2 -10.0 DUF192 domain-containing protein compare
ABIE51_RS13885 -1.2 -2.3 sigma-E factor negative regulatory protein compare
ABIE51_RS11510 -1.2 -9.7 tRNA 2-thiouridine(34) synthase MnmA compare
ABIE51_RS16415 -1.2 -9.3 aldo/keto reductase compare
ABIE51_RS13815 -1.2 -5.9 beta-N-acetylhexosaminidase compare
ABIE51_RS15990 -1.2 -2.5 PTS sugar transporter subunit IIA compare
ABIE51_RS15440 -1.2 -4.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE51_RS06500 -1.2 -3.3 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS04835 -1.2 -5.6 glycosyltransferase family 2 protein compare
ABIE51_RS13530 -1.1 -6.3 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE51_RS04335 -1.1 -7.5 hypothetical protein compare
ABIE51_RS11805 -1.1 -3.5 ribonuclease E compare
ABIE51_RS04850 -1.1 -7.5 sigma-54 dependent transcriptional regulator compare
ABIE51_RS11970 -1.1 -2.3 response regulator transcription factor compare
ABIE51_RS19015 -1.1 -7.4 cytochrome c4 compare
ABIE51_RS12565 -1.1 -8.6 acyl-CoA dehydrogenase family protein compare
ABIE51_RS11110 -1.1 -5.5 molybdate ABC transporter substrate-binding protein compare
ABIE51_RS04570 -1.1 -1.6 general secretion pathway protein GspN compare
ABIE51_RS04535 -1.1 -4.0 type II secretion system major pseudopilin GspG compare
ABIE51_RS04545 -1.1 -2.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABIE51_RS06550 -1.1 -6.5 FtsH protease activity modulator HflK compare
ABIE51_RS16065 -1.1 -5.0 pyrroline-5-carboxylate reductase compare
ABIE51_RS08720 -1.0 -5.5 heme exporter protein CcmB compare
ABIE51_RS15905 -1.0 -7.4 DUF3108 domain-containing protein compare
ABIE51_RS15095 -1.0 -3.2 TMEM43 family protein compare
ABIE51_RS06815 -1.0 -6.6 (2E,6E)-farnesyl diphosphate synthase compare
ABIE51_RS15435 -1.0 -7.2 cytochrome bc complex cytochrome b subunit compare
ABIE51_RS17200 -1.0 -6.6 citrate synthase compare
ABIE51_RS15870 -1.0 -5.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU compare
ABIE51_RS00395 -1.0 -9.1 hypothetical protein compare
ABIE51_RS06540 -1.0 -2.1 RNA chaperone Hfq compare
ABIE51_RS04410 -1.0 -4.4 MlaD family protein compare
ABIE51_RS00270 -1.0 -2.0 DUF4156 domain-containing protein compare
ABIE51_RS01110 -1.0 -4.8 c-type cytochrome compare
ABIE51_RS15430 -1.0 -6.5 cytochrome c1 compare
ABIE51_RS06015 -1.0 -2.0 methylisocitrate lyase compare
ABIE51_RS18520 -1.0 -2.0 hypothetical protein compare
ABIE51_RS04370 -1.0 -5.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABIE51_RS18515 -1.0 -3.1 tRNA-Leu compare
ABIE51_RS01845 -0.9 -3.9 sulfate ABC transporter permease subunit CysW compare
ABIE51_RS01015 -0.9 -4.8 ABC transporter ATP-binding protein compare
ABIE51_RS01855 -0.9 -5.4 sulfate ABC transporter substrate-binding protein compare
ABIE51_RS13265 -0.9 -6.9 amino acid permease compare
ABIE51_RS01840 -0.9 -4.9 sulfate/molybdate ABC transporter ATP-binding protein compare
ABIE51_RS17500 -0.9 -7.6 helix-turn-helix domain-containing protein compare
ABIE51_RS04075 -0.9 -6.3 4-hydroxyphenylpyruvate dioxygenase compare
ABIE51_RS15015 -0.9 -2.2 preprotein translocase subunit YajC compare
ABIE51_RS19195 -0.9 -7.6 cytochrome c oxidase assembly protein compare
ABIE51_RS13485 -0.9 -2.4 phosphoglycolate phosphatase compare
ABIE51_RS08715 -0.9 -6.4 heme ABC transporter permease CcmC compare
ABIE51_RS17345 -0.9 -4.5 cell division protein ZapA compare
ABIE51_RS02175 -0.9 -7.5 signal peptide peptidase SppA compare
ABIE51_RS14510 -0.9 -6.1 arginyltransferase compare
ABIE51_RS15375 -0.9 -4.9 SDR family NAD(P)-dependent oxidoreductase compare
ABIE51_RS08690 -0.9 -1.8 cytochrome c-type biogenesis protein compare
ABIE51_RS17615 -0.9 -5.6 TolC family outer membrane protein compare
ABIE51_RS07090 -0.9 -5.6 recombination protein NinB compare
ABIE51_RS14300 -0.9 -6.1 GNAT family N-acetyltransferase compare
ABIE51_RS13455 -0.9 -2.9 membrane protein insertion efficiency factor YidD compare
ABIE51_RS01005 -0.9 -8.0 outer membrane lipid asymmetry maintenance protein MlaD compare
ABIE51_RS04415 -0.9 -6.1 ABC transporter ATP-binding protein compare
ABIE51_RS06495 -0.9 -3.0 YqaA family protein compare
ABIE51_RS13145 -0.9 -6.3 acetyl-CoA C-acyltransferase compare
ABIE51_RS07290 -0.8 -4.2 DUF5681 domain-containing protein compare
ABIE51_RS00940 -0.8 -5.6 ferredoxin reductase compare
ABIE51_RS08725 -0.8 -3.4 heme ABC exporter ATP-binding protein CcmA compare
ABIE51_RS09280 -0.8 -5.5 cytochrome c compare
ABIE51_RS09275 -0.8 -5.2 cytochrome c compare
ABIE51_RS19210 -0.8 -6.1 cytochrome c oxidase subunit II compare
ABIE51_RS04710 -0.8 -0.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE51_RS05375 -0.8 -4.0 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS01515 -0.8 -4.7 phospholipase D family protein compare
ABIE51_RS11515 -0.8 -2.7 high frequency lysogenization protein HflD compare
ABIE51_RS09420 -0.8 -5.8 type IV pilus biogenesis/stability protein PilW compare
ABIE51_RS19205 -0.8 -6.9 cytochrome c oxidase subunit I compare
ABIE51_RS04405 -0.8 -4.7 ABC-type transport auxiliary lipoprotein family protein compare
ABIE51_RS12715 -0.8 -5.1 DUF3298 and DUF4163 domain-containing protein compare
ABIE51_RS15865 -0.8 -3.0 phosphotransferase compare
ABIE51_RS16365 -0.8 -2.6 glycine cleavage system aminomethyltransferase GcvT compare
ABIE51_RS01045 -0.8 -2.0 hypothetical protein compare
ABIE51_RS19185 -0.8 -6.0 twin transmembrane helix small protein compare
ABIE51_RS17505 -0.8 -6.4 winged helix-turn-helix domain-containing protein compare
ABIE51_RS13540 -0.8 -4.6 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
ABIE51_RS00945 -0.8 -6.7 acyl-CoA desaturase compare
ABIE51_RS00050 -0.8 -7.0 MFS transporter compare
ABIE51_RS05175 -0.8 -3.2 hypothetical protein compare
ABIE51_RS06820 -0.7 -2.9 exodeoxyribonuclease VII small subunit compare
ABIE51_RS12600 -0.7 -1.3 cold-shock protein compare
ABIE51_RS11790 -0.7 -4.8 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE51_RS17665 -0.7 -1.7 mitochondrial fission ELM1 family protein compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source Ying_all64 across organisms