Experiment set3S458 for Lysobacter sp. OAE881

Compare to:

Ying_all64 rep B; time point 1

200 most important genes:

  gene name fitness t score description  
ABIE51_RS01280 -5.5 -5.3 lipid-binding SYLF domain-containing protein compare
ABIE51_RS17630 -5.0 -4.8 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS15620 -4.8 -6.6 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS16260 -4.8 -3.3 hypothetical protein compare
ABIE51_RS06340 -4.8 -13.1 hypothetical protein compare
ABIE51_RS03940 -4.7 -5.5 response regulator transcription factor compare
ABIE51_RS04310 -4.5 -6.5 glycosyltransferase compare
ABIE51_RS05300 -4.5 -9.6 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS01635 -4.4 -5.3 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS14070 -4.2 -7.6 glycosyltransferase family 9 protein compare
ABIE51_RS11490 -4.2 -26.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS02280 -4.1 -7.4 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS14555 -4.0 -2.7 M15 family metallopeptidase compare
ABIE51_RS15615 -4.0 -11.9 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS13890 -3.9 -25.2 RNA polymerase sigma factor RpoE compare
ABIE51_RS03160 -3.9 -18.9 septal ring lytic transglycosylase RlpA family protein compare
ABIE51_RS16395 -3.8 -2.6 PDZ domain-containing protein compare
ABIE51_RS19030 -3.8 -8.1 endonuclease/exonuclease/phosphatase family protein compare
ABIE51_RS02300 -3.8 -7.7 lauroyl acyltransferase compare
ABIE51_RS05540 -3.8 -2.6 hypothetical protein compare
ABIE51_RS04245 -3.7 -3.6 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS05295 -3.7 -4.4 response regulator transcription factor compare
ABIE51_RS03165 -3.7 -27.9 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS14085 -3.7 -3.5 DUF6165 family protein compare
ABIE51_RS03265 -3.5 -7.9 trypsin-like peptidase domain-containing protein compare
ABIE51_RS16510 -3.5 -12.1 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS00035 -3.5 -24.6 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS15890 -3.5 -6.6 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS03945 -3.4 -19.4 ATP-binding protein compare
ABIE51_RS09365 -3.3 -3.9 glycosyltransferase family 4 protein compare
ABIE51_RS13260 -3.2 -15.6 amino acid permease compare
ABIE51_RS16555 -3.0 -14.5 SLC13 family permease compare
ABIE51_RS00635 -3.0 -4.5 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS04805 -3.0 -2.0 A24 family peptidase compare
ABIE51_RS09065 -3.0 -11.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS06000 -3.0 -11.5 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS17515 -3.0 -15.1 phosphomethylpyrimidine synthase ThiC compare
ABIE51_RS06500 -2.9 -5.2 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS01630 -2.9 -8.9 SIS domain-containing protein compare
ABIE51_RS17190 -2.9 -2.0 penicillin-binding protein 1A compare
ABIE51_RS03935 -2.8 -7.9 hypothetical protein compare
ABIE51_RS14155 -2.8 -7.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS04505 -2.8 -7.9 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS08040 -2.7 -13.7 glucose-6-phosphate isomerase compare
ABIE51_RS09425 -2.7 -1.8 helix-turn-helix domain-containing protein compare
ABIE51_RS02265 -2.7 -3.4 glycosyltransferase family 2 protein compare
ABIE51_RS02450 -2.7 -5.9 MarR family transcriptional regulator compare
ABIE51_RS05180 -2.6 -7.3 glycosyltransferase compare
ABIE51_RS11495 -2.6 -7.0 ATP-dependent Clp protease adapter ClpS compare
ABIE51_RS10470 -2.6 -9.6 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS09105 -2.6 -6.2 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS03185 -2.6 -9.3 carboxy terminal-processing peptidase compare
ABIE51_RS14045 -2.5 -4.5 MoaD/ThiS family protein compare
ABIE51_RS09375 -2.4 -10.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS14150 -2.4 -9.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS17770 -2.4 -4.2 phosphoribosylamine--glycine ligase compare
ABIE51_RS02220 -2.3 -4.0 DNA topoisomerase I compare
ABIE51_RS09370 -2.3 -11.9 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS03155 -2.3 -12.1 lytic murein transglycosylase B compare
ABIE51_RS02975 -2.3 -10.9 DmsC/YnfH family molybdoenzyme membrane anchor subunit compare
ABIE51_RS02980 -2.2 -7.8 4Fe-4S dicluster domain-containing protein compare
ABIE51_RS04475 -2.2 -12.9 leucyl aminopeptidase compare
ABIE51_RS07575 -2.2 -2.8 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS06180 -2.1 -5.9 amidophosphoribosyltransferase compare
ABIE51_RS14040 -2.1 -8.0 molybdenum cofactor biosynthesis protein MoaE compare
ABIE51_RS15970 -2.1 -5.0 HPr(Ser) kinase/phosphatase compare
ABIE51_RS02990 -2.1 -14.8 molybdopterin oxidoreductase family protein compare
ABIE51_RS09450 -1.9 -7.1 gephyrin-like molybdotransferase Glp compare
ABIE51_RS14060 -1.9 -6.0 MBL fold metallo-hydrolase compare
ABIE51_RS17450 -1.9 -13.8 Mur ligase family protein compare
ABIE51_RS08780 -1.9 -7.9 SMC-Scp complex subunit ScpB compare
ABIE51_RS08880 -1.9 -10.0 chromosome segregation protein SMC compare
ABIE51_RS01000 -1.9 -13.4 ABC transporter substrate-binding protein compare
ABIE51_RS14050 -1.9 -3.6 cyclic pyranopterin monophosphate synthase MoaC compare
ABIE51_RS04620 -1.8 -11.9 serine hydroxymethyltransferase compare
ABIE51_RS00990 -1.8 -11.7 VacJ family lipoprotein compare
ABIE51_RS06905 -1.7 -7.2 RIP metalloprotease RseP compare
ABIE51_RS09445 -1.7 -8.5 NTP transferase domain-containing protein compare
ABIE51_RS08785 -1.7 -10.9 ScpA family protein compare
ABIE51_RS17095 -1.6 -10.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS06785 -1.6 -11.6 ribonuclease G compare
ABIE51_RS17320 -1.6 -13.1 aminopeptidase P N-terminal domain-containing protein compare
ABIE51_RS04390 -1.5 -8.5 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS19265 -1.5 -10.7 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS09045 -1.5 -3.9 GntR family transcriptional regulator compare
ABIE51_RS13530 -1.5 -9.0 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE51_RS14090 -1.4 -5.6 PP2C family serine/threonine-protein phosphatase compare
ABIE51_RS04835 -1.4 -7.4 glycosyltransferase family 2 protein compare
ABIE51_RS04250 -1.4 -6.6 maleylacetoacetate isomerase compare
ABIE51_RS19165 -1.4 -6.3 heme o synthase compare
ABIE51_RS13115 -1.4 -9.0 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein compare
ABIE51_RS10670 -1.4 -1.3 LysR family transcriptional regulator compare
ABIE51_RS11115 -1.4 -1.9 molybdate ABC transporter permease subunit compare
ABIE51_RS04535 -1.4 -4.2 type II secretion system major pseudopilin GspG compare
ABIE51_RS11510 -1.4 -10.1 tRNA 2-thiouridine(34) synthase MnmA compare
ABIE51_RS17740 -1.3 -7.3 hypothetical protein compare
ABIE51_RS13300 -1.3 -5.0 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS14055 -1.3 -3.0 GTP 3',8-cyclase MoaA compare
ABIE51_RS14530 -1.3 -5.9 hypothetical protein compare
ABIE51_RS08690 -1.3 -1.8 cytochrome c-type biogenesis protein compare
ABIE51_RS19015 -1.3 -8.9 cytochrome c4 compare
ABIE51_RS18545 -1.3 -1.9 DUF6249 domain-containing protein compare
ABIE51_RS19180 -1.3 -5.2 SURF1 family protein compare
ABIE51_RS12565 -1.3 -10.2 acyl-CoA dehydrogenase family protein compare
ABIE51_RS01265 -1.3 -7.3 twin-arginine translocase subunit TatC compare
ABIE51_RS16415 -1.3 -9.9 aldo/keto reductase compare
ABIE51_RS15440 -1.3 -4.8 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE51_RS13305 -1.3 -2.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE51_RS15905 -1.3 -7.5 DUF3108 domain-containing protein compare
ABIE51_RS11110 -1.3 -6.1 molybdate ABC transporter substrate-binding protein compare
ABIE51_RS06815 -1.3 -8.0 (2E,6E)-farnesyl diphosphate synthase compare
ABIE51_RS13480 -1.2 -2.4 phytoene/squalene synthase family protein compare
ABIE51_RS15435 -1.2 -8.4 cytochrome bc complex cytochrome b subunit compare
ABIE51_RS00270 -1.2 -3.2 DUF4156 domain-containing protein compare
ABIE51_RS04335 -1.2 -8.0 hypothetical protein compare
ABIE51_RS17530 -1.2 -8.7 threonine synthase compare
ABIE51_RS06015 -1.2 -1.8 methylisocitrate lyase compare
ABIE51_RS09415 -1.2 -9.5 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABIE51_RS17705 -1.2 -9.3 protein-disulfide reductase DsbD compare
ABIE51_RS17440 -1.2 -10.2 bifunctional DedA family/phosphatase PAP2 family protein compare
ABIE51_RS12635 -1.2 -3.1 hypothetical protein compare
ABIE51_RS05375 -1.2 -6.5 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS03135 -1.2 -4.2 rod shape-determining protein MreC compare
ABIE51_RS04085 -1.2 -7.4 homogentisate 1,2-dioxygenase compare
ABIE51_RS18995 -1.1 -6.1 alpha-glucosidase family protein compare
ABIE51_RS01110 -1.1 -5.2 c-type cytochrome compare
ABIE51_RS17400 -1.1 -8.7 DUF192 domain-containing protein compare
ABIE51_RS04850 -1.1 -8.4 sigma-54 dependent transcriptional regulator compare
ABIE51_RS16735 -1.1 -2.3 flagellar export chaperone FliS compare
ABIE51_RS01845 -1.1 -4.5 sulfate ABC transporter permease subunit CysW compare
ABIE51_RS17060 -1.1 -5.6 phosphoglycerate kinase compare
ABIE51_RS11120 -1.1 -3.2 ATP-binding cassette domain-containing protein compare
ABIE51_RS11805 -1.1 -5.2 ribonuclease E compare
ABIE51_RS17345 -1.1 -4.2 cell division protein ZapA compare
ABIE51_RS14345 -1.0 -4.5 aminomethyl-transferring glycine dehydrogenase compare
ABIE51_RS15015 -1.0 -2.8 preprotein translocase subunit YajC compare
ABIE51_RS17200 -1.0 -6.5 citrate synthase compare
ABIE51_RS01015 -1.0 -5.3 ABC transporter ATP-binding protein compare
ABIE51_RS03845 -1.0 -1.9 cbb3-type cytochrome c oxidase subunit 3 compare
ABIE51_RS15095 -1.0 -4.7 TMEM43 family protein compare
ABIE51_RS16065 -1.0 -2.4 pyrroline-5-carboxylate reductase compare
ABIE51_RS01005 -1.0 -9.5 outer membrane lipid asymmetry maintenance protein MlaD compare
ABIE51_RS13315 -1.0 -2.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABIE51_RS13265 -1.0 -8.1 amino acid permease compare
ABIE51_RS04075 -1.0 -7.5 4-hydroxyphenylpyruvate dioxygenase compare
ABIE51_RS04410 -1.0 -5.0 MlaD family protein compare
ABIE51_RS06430 -1.0 -1.9 hypothetical protein compare
ABIE51_RS15990 -1.0 -2.2 PTS sugar transporter subunit IIA compare
ABIE51_RS08705 -1.0 -5.7 cytochrome c maturation protein CcmE compare
ABIE51_RS04370 -1.0 -5.4 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
ABIE51_RS01390 -1.0 -4.0 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS15430 -1.0 -6.3 cytochrome c1 compare
ABIE51_RS08720 -1.0 -4.9 heme exporter protein CcmB compare
ABIE51_RS19205 -0.9 -8.3 cytochrome c oxidase subunit I compare
ABIE51_RS06535 -0.9 -5.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABIE51_RS15375 -0.9 -4.6 SDR family NAD(P)-dependent oxidoreductase compare
ABIE51_RS14300 -0.9 -5.2 GNAT family N-acetyltransferase compare
ABIE51_RS09275 -0.9 -5.3 cytochrome c compare
ABIE51_RS19210 -0.9 -7.0 cytochrome c oxidase subunit II compare
ABIE51_RS08520 -0.9 -1.4 response regulator transcription factor compare
ABIE51_RS17505 -0.9 -7.5 winged helix-turn-helix domain-containing protein compare
ABIE51_RS01850 -0.9 -5.0 sulfate ABC transporter permease subunit CysT compare
ABIE51_RS08885 -0.9 -1.2 cell division protein ZipA compare
ABIE51_RS01010 -0.9 -6.0 MlaE family lipid ABC transporter permease subunit compare
ABIE51_RS01515 -0.9 -4.6 phospholipase D family protein compare
ABIE51_RS18855 -0.9 -4.5 polysaccharide deacetylase family protein compare
ABIE51_RS06550 -0.9 -5.5 FtsH protease activity modulator HflK compare
ABIE51_RS17500 -0.9 -7.2 helix-turn-helix domain-containing protein compare
ABIE51_RS13145 -0.9 -6.1 acetyl-CoA C-acyltransferase compare
ABIE51_RS07130 -0.8 -3.5 hypothetical protein compare
ABIE51_RS00995 -0.8 -2.2 STAS domain-containing protein compare
ABIE51_RS13320 -0.8 -4.1 histidinol-phosphate transaminase compare
ABIE51_RS15865 -0.8 -3.2 phosphotransferase compare
ABIE51_RS05175 -0.8 -2.9 hypothetical protein compare
ABIE51_RS11790 -0.8 -5.7 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE51_RS01840 -0.8 -4.5 sulfate/molybdate ABC transporter ATP-binding protein compare
ABIE51_RS09280 -0.8 -5.7 cytochrome c compare
ABIE51_RS10840 -0.8 -1.5 ferritin-like domain-containing protein compare
ABIE51_RS06495 -0.8 -2.8 YqaA family protein compare
ABIE51_RS16420 -0.8 -3.6 TMEM165/GDT1 family protein compare
ABIE51_RS19175 -0.8 -2.6 hypothetical protein compare
ABIE51_RS00725 -0.8 -5.4 energy transducer TonB compare
ABIE51_RS07160 -0.8 -6.1 hypothetical protein compare
ABIE51_RS05045 -0.8 -1.5 Holliday junction branch migration protein RuvA compare
ABIE51_RS02080 -0.8 -5.9 ATP-dependent RNA helicase RhlB compare
ABIE51_RS13815 -0.8 -4.6 beta-N-acetylhexosaminidase compare
ABIE51_RS04415 -0.8 -5.4 ABC transporter ATP-binding protein compare
ABIE51_RS04405 -0.8 -4.4 ABC-type transport auxiliary lipoprotein family protein compare
ABIE51_RS02175 -0.8 -6.4 signal peptide peptidase SppA compare
ABIE51_RS09420 -0.8 -6.0 type IV pilus biogenesis/stability protein PilW compare
ABIE51_RS00395 -0.8 -6.9 hypothetical protein compare
ABIE51_RS04420 -0.8 -5.0 ABC transporter permease compare
ABIE51_RS04710 -0.8 -0.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE51_RS12715 -0.8 -4.5 DUF3298 and DUF4163 domain-containing protein compare
ABIE51_RS00945 -0.8 -6.5 acyl-CoA desaturase compare
ABIE51_RS08715 -0.8 -5.5 heme ABC transporter permease CcmC compare
ABIE51_RS19215 -0.8 -6.7 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA compare
ABIE51_RS01030 -0.8 -2.5 exodeoxyribonuclease V subunit alpha compare
ABIE51_RS19195 -0.8 -6.2 cytochrome c oxidase assembly protein compare
ABIE51_RS05005 -0.8 -1.0 PhzF family phenazine biosynthesis isomerase compare


Specific Phenotypes

None in this experiment

For Lysobacter sp. OAE881 in carbon source experiments

For carbon source Ying_all64 across organisms