Experiment set3S274 for Mycobacterium tuberculosis H37Rv

Compare to:

7H9 with Isoniazid 0.025 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
Rv0877 +3.2 20.0 Conserved hypothetical protein compare
Rv2404c +3.2 19.4 Probable GTP-binding protein LepA (GTP-binding elongation factor) compare
Rv2583c +3.0 4.9 Probable GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase) compare
Rv1908c +2.9 8.3 Catalase-peroxidase-peroxynitritase T KatG compare
Rv1170 +2.8 7.1 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB (GlcNAc-Ins deacetylase) compare
Rv2621c +2.6 2.3 Possible transcriptional regulatory protein compare
Rv0248c +2.4 8.2 Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) compare
Rv0056 +2.2 3.7 50S ribosomal protein L9 RplI compare
Rv0249c +2.1 9.5 Probable succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase) compare
Rv1626 +2.1 8.3 Probable two-component system transcriptional regulator compare
Rv3810 +2.0 2.5 Exported repetitive protein precursor PirG (cell surface protein) (EXP53) compare
Rv0782 +2.0 3.4 Probable protease II PtrBb [second part] (oligopeptidase B) compare
Rv2739c +1.9 3.7 Possible alanine rich transferase compare
Rv3136 +1.9 7.1 PPE family protein PPE51 compare
Rv1259 +1.9 1.6 Probable uracil DNA glycosylase, UdgB compare
Rv1291c +1.8 3.0 Conserved hypothetical secreted protein compare
Rv2154c +1.8 1.2 FtsW-like protein FtsW compare
Rv0544c +1.8 3.2 Possible conserved transmembrane protein compare
Rv3514 +1.8 3.7 PE-PGRS family protein PE_PGRS57 compare
Rv1112 +1.7 2.6 Probable GTP binding protein compare
Rv3768 +1.7 2.2 Unknown protein compare
Rv2433c +1.7 6.8 Hypothetical protein compare
Rv3261 +1.7 6.3 Probable F420 biosynthesis protein FbiA compare
Rv1090 +1.7 6.6 Probable cellulase CelA2b (endo-1,4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase) compare
Rv3848 +1.6 2.9 Probable conserved transmembrane protein compare
Rv1414 +1.6 1.2 Conserved hypothetical protein compare
Rv0310c +1.6 2.3 Conserved protein compare
Rv2752c +1.6 6.0 Conserved hypothetical protein compare
Rv3309c +1.6 3.3 Probable uracil phosphoribosyltransferase Upp (UMP pyrophosphorylase) (uprtase) (UMP diphosphorylase) compare
Rv3316 +1.6 3.5 Probable succinate dehydrogenase (cytochrome B-556 subunit) SdhC (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) compare
Rv2276 +1.6 2.2 Cytochrome P450 121 Cyp121 compare
Rv1946c +1.5 2.3 Possible lipoprotein compare
Rv3591c +1.5 2.6 Possible hydrolase compare
Rv0279c +1.5 6.9 PE-PGRS family protein PE_PGRS4 compare
Rv2055c +1.5 2.2 30S ribosomal protein S18 RpsR2 compare
Rv2933 +1.5 9.5 Phenolpthiocerol synthesis type-I polyketide synthase PpsC compare
Rv1091 +1.5 7.2 PE-PGRS family protein PE_PGRS22 compare
Rv2931 +1.4 10.4 Phenolpthiocerol synthesis type-I polyketide synthase PpsA compare
Rv3306c +1.4 1.1 Probable amidohydrolase AmiB1 (aminohydrolase) compare
Rv3719 +1.4 6.9 Conserved protein compare
Rv2930 +1.4 11.6 Fatty-acid-AMP ligase FadD26 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase) compare
Rv3220c +1.4 3.4 Probable two component sensor kinase compare
Rv3717 +1.4 4.0 Conserved hypothetical protein compare
Rv0819 +1.4 3.8 GCN5-related N-acetyltransferase, MshD compare
Rv3658c +1.4 1.0 Probable conserved transmembrane protein compare
Rv2434c +1.4 3.9 Probable conserved transmembrane protein compare
Rv3085 +1.3 1.4 Probable short-chain type dehydrogenase/reductase compare
Rv1730c +1.3 1.8 Possible penicillin-binding protein compare
Rv2009 +1.3 2.5 Antitoxin VapB15 compare
Rv0038 +1.3 3.8 Conserved protein compare
Rv2850c +1.3 1.6 Possible magnesium chelatase compare
Rv1262c +1.3 1.2 Hypothetical hit-like protein compare
Rv2932 +1.3 9.3 Phenolpthiocerol synthesis type-I polyketide synthase PpsB compare
Rv3715c +1.3 2.1 Probable recombination protein RecR compare
Rv1282c +1.2 2.2 Probable oligopeptide-transport integral membrane protein ABC transporter OppC compare
Rv2919c +1.2 2.1 Probable nitrogen regulatory protein P-II GlnB compare
Rv0561c +1.2 1.7 Possible oxidoreductase compare
Rv3819 +1.2 0.8 Unknown protein compare
Rv3668c +1.2 3.9 Possible protease compare
Rv2432c +1.1 1.6 Hypothetical protein compare
Rv1957 +1.1 1.7 Hypothetical protein compare
Rv1444c +1.1 2.7 Unknown protein compare
Rv0867c +1.1 0.6 Possible resuscitation-promoting factor RpfA compare
Rv2935 +1.1 7.5 Phenolpthiocerol synthesis type-I polyketide synthase PpsE compare
Rv1087 +1.1 6.7 PE-PGRS family protein PE_PGRS21 compare
Rv0994 +1.1 5.2 Probable molybdopterin biosynthesis protein MoeA1 compare
Rv2388c +1.1 6.0 Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) compare
Rv1791 +1.1 1.0 PE family protein PE19 compare
Rv3816c +1.1 0.5 Possible acyltransferase compare
Rv1411c +1.1 3.5 Conserved lipoprotein LprG compare
Rv2940c +1.1 8.0 Probable multifunctional mycocerosic acid synthase membrane-associated Mas compare
Rv2934 +1.1 7.8 Phenolpthiocerol synthesis type-I polyketide synthase PpsD compare
Rv0939 +1.1 1.1 Possible bifunctional enzyme: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HHDD isomerase) + cyclase/dehydrase compare
Rv3010c +1.1 4.0 Probable 6-phosphofructokinase PfkA (phosphohexokinase) (phosphofructokinase) compare
Rv3511 +1.1 4.0 PE-PGRS family protein PE_PGRS55 compare
Rv0155 +1.1 4.8 Probable NAD(P) transhydrogenase (subunit alpha) PntAa [first part; catalytic part] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha) compare
Rv2899c +1.0 1.2 Possible FdhD protein homolog compare
Rv0436c +1.0 1.8 Probable CDP-diacylglycerol--serine O-phosphatidyltransferase PssA (PS synthase) (phosphatidylserine synthase) compare
Rv1577c +1.0 0.7 Probable PhiRv1 phage protein compare
Rv2312 +1.0 2.0 Hypothetical protein compare
Rv1079 +1.0 2.8 Cystathionine gamma-synthase MetB (CGS) (O-succinylhomoserine [thiol]-lyase) compare
Rv2939 +1.0 5.4 Possible conserved polyketide synthase associated protein PapA5 compare
Rv0919 +1.0 2.6 GCN5-related N-acetyltransferase compare
Rv2292c +1.0 0.7 Hypothetical protein compare
Rv1435c +1.0 2.5 Probable conserved proline, glycine, valine-rich secreted protein compare
Rv0746 +1.0 4.4 PE-PGRS family protein PE_PGRS9 compare
Rv1459c +1.0 0.9 Possible conserved integral membrane protein compare
Rv2588c +1.0 1.1 Probable conserved membrane protein secretion factor YajC compare
Rv1410c +1.0 5.0 Aminoglycosides/tetracycline-transport integral membrane protein compare
Rv0745 +1.0 2.2 Conserved hypothetical protein compare
Rv1473A +1.0 0.7 Possible transcriptional regulatory protein compare
Rv0674 +1.0 0.7 Conserved hypothetical protein compare
Rv2662 +1.0 2.0 Hypothetical protein compare
Rv2383c +1.0 2.7 Phenyloxazoline synthase MbtB (phenyloxazoline synthetase) compare
Rv3433c +1.0 1.9 Conserved protein compare
Rv3081 +1.0 0.8 Conserved hypothetical protein compare
Rv0247c +1.0 0.8 Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase) compare
Rv0963c +1.0 3.0 Conserved hypothetical protein compare
Rv0157 +0.9 2.4 Probable NAD(P) transhydrogenase (subunit beta) PntB [integral membrane protein] (pyridine nucleotide transhydrogenase subunit beta) (nicotinamide nucleotide transhydrogenase subunit beta) compare
Rv0737 +0.9 2.3 Possible transcriptional regulatory protein compare
Rv2695 +0.9 4.7 Conserved hypothetical alanine rich protein compare
Rv2793c +0.9 1.3 Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase) compare
Rv1159A +0.9 1.8 Unknown protein compare
Rv2985 +0.9 1.1 Possible hydrolase MutT1 compare
Rv1088 +0.9 3.2 PE family protein PE9 compare
Rv0281 +0.9 3.9 Possible S-adenosylmethionine-dependent methyltransferase compare
Rv2431c +0.9 3.8 PE family protein PE25 compare
Rv1055 +0.9 0.9 Possible integrase (fragment) compare
Rv3518c +0.9 1.6 Probable cytochrome P450 monooxygenase 142 Cyp142 compare
Rv0973c +0.9 1.6 Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA2: biotin carboxylase + biotin carboxyl carrier protein (BCCP) compare
Rv2681 +0.9 3.4 Conserved hypothetical alanine rich protein compare
Rv0556 +0.9 1.0 Probable conserved transmembrane protein compare
Rv3067 +0.9 2.1 Conserved hypothetical protein compare
Rv0360c +0.9 2.7 Conserved protein compare
Rv3318 +0.9 3.0 Probable succinate dehydrogenase (flavoprotein subunit) SdhA (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) compare
Rv2475c +0.9 2.2 Conserved protein compare
Rv0545c +0.9 2.1 Probable low-affinity inorganic phosphate transporter integral membrane protein PitA compare
Rv1925 +0.9 4.9 Probable acyl-CoA ligase FadD31 (acyl-CoA synthetase) (acyl-CoA synthase) compare
Rv0767c +0.9 3.2 Conserved hypothetical protein compare
Rv1454c +0.9 3.5 Probable quinone reductase Qor (NADPH:quinone reductase) (zeta-crystallin homolog protein) compare
Rv0741 +0.9 2.3 Probable transposase (fragment) compare
Rv0999 +0.8 2.1 Unknown protein compare
Rv0583c +0.8 2.5 Probable conserved lipoprotein LpqN compare
Rv0344c +0.8 1.2 Probable lipoprotein LpqJ compare
Rv3162c +0.8 1.1 Possible integral membrane protein compare
Rv2743c +0.8 2.6 Possible conserved transmembrane alanine rich protein compare
Rv1566c +0.8 2.4 Possible Inv protein compare
Rv2941 +0.8 6.6 Fatty-acid-AMP ligase FadD28 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase) compare
Rv0632c +0.8 1.2 Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv3414c +0.8 1.0 Probable alternative RNA polymerase sigma-D factor SigD compare
Rv0040c +0.8 4.0 Secreted proline rich protein Mtc28 (proline rich 28 kDa antigen) compare
Rv0356c +0.8 1.3 Conserved protein compare
Rv1087A +0.8 3.2 Conserved hypothetical protein compare
Rv2212 +0.8 2.9 Adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase) compare
Rv0769 +0.8 1.5 Probable dehydrogenase/reductase compare
Rv3747 +0.8 1.4 Conserved protein compare
Rv1615 +0.8 1.6 Probable membrane protein compare
Rv1322 +0.8 1.1 Conserved hypothetical protein compare
Rv3751 +0.8 1.3 Probable integrase (fragment) compare
Rv0748 +0.8 1.7 Possible antitoxin VapB31 compare
Rv2184c +0.8 2.6 Conserved hypothetical protein compare
Rv1490 +0.8 2.1 Probable membrane protein compare
Rv0277c +0.8 2.4 Possible toxin VapC25. Contains PIN domain. compare
Rv1761c +0.8 1.3 Possible exported protein compare
Rv0178 +0.8 2.1 Probable conserved Mce associated membrane protein compare
Rv3559c +0.8 0.7 Probable oxidoreductase compare
Rv2647 +0.8 1.1 Hypothetical protein compare
Rv1071c +0.8 2.5 Possible enoyl-CoA hydratase EchA9 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv2474c +0.8 1.1 Conserved hypothetical protein compare
Rv2046 +0.8 2.1 Probable lipoprotein LppI compare
Rv1628c +0.8 2.0 Conserved protein compare
Rv3069 +0.8 1.4 Probable conserved transmembrane protein compare
Rv0609 +0.8 0.6 Possible toxin VapC28. Contains PIN domain. compare
Rv2929 +0.8 4.7 Hypothetical protein compare
Rv0392c +0.8 0.9 Probable membrane NADH dehydrogenase NdhA compare
Rv0276 +0.8 2.6 Conserved hypothetical protein compare
Rv0588 +0.8 1.1 Conserved hypothetical integral membrane protein YrbE2B compare
Rv3725 +0.8 1.2 Possible oxidoreductase compare
Rv3360 +0.8 1.9 Conserved hypothetical protein compare
Rv2021c +0.8 2.1 Transcriptional regulatory protein compare
Rv0743c +0.7 3.2 Hypothetical protein compare
Rv3507 +0.7 3.1 PE-PGRS family protein PE_PGRS53 compare
Rv2395 +0.7 4.7 Probable conserved integral membrane protein compare
Rv3371 +0.7 1.2 Possible triacylglycerol synthase (diacylglycerol acyltransferase) compare
Rv3207c +0.7 1.8 Conserved protein compare
Rv1792 +0.7 0.8 ESAT-6 like protein EsxM compare
Rv3666c +0.7 1.5 Probable periplasmic dipeptide-binding lipoprotein DppA compare
Rv0535 +0.7 0.9 Probable 5'-methylthioadenosine phosphorylase Pnp (MTA phosphorylase) compare
Rv1895 +0.7 1.0 Possible dehydrogenase compare
Rv0050 +0.7 0.9 Probable bifunctional penicillin-binding protein 1A/1B PonA1 (murein polymerase) (PBP1): penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase) compare
Rv3142c +0.7 1.1 Hypothetical protein compare
Rv3509c +0.7 5.0 Probable acetohydroxyacid synthase IlvX (acetolactate synthase) compare
Rv0234c +0.7 2.1 Succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD1 compare
Rv3695 +0.7 1.1 Possible conserved membrane protein compare
Rv0971c +0.7 1.2 Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv3417c +0.7 1.6 60 kDa chaperonin 1 GroEL1 (protein CPN60-1) (GroEL protein 1) compare
Rv2740 +0.7 2.9 Epoxide hydrolase compare
Rv0251c +0.7 2.5 Heat shock protein Hsp (heat-stress-induced ribosome-binding protein A) compare
Rv0113 +0.7 0.7 Probable sedoheptulose-7-phosphate isomerase GmhA (phosphoheptose isomerase) compare
Rv0161 +0.7 1.7 Possible oxidoreductase compare
Rv0098 +0.7 0.9 Probable fatty acyl CoA thioesterase type III FcoT compare
Rv1692 +0.7 1.9 Probable phosphatase compare
Rv0581 +0.7 2.2 Possible antitoxin VapB26 compare
Rv2923c +0.7 0.8 Conserved protein compare
Rv3515c +0.7 2.3 Fatty-acid-CoA ligase FadD19 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv1065 +0.7 3.0 Conserved hypothetical protein compare
Rv0818 +0.7 2.5 Transcriptional regulatory protein compare
Rv1776c +0.7 1.9 Possible transcriptional regulatory protein compare
Rv2887 +0.7 0.8 Probable transcriptional regulatory protein compare
Rv0080 +0.7 1.8 Conserved hypothetical protein compare
Rv0273c +0.7 1.4 Possible transcriptional regulatory protein compare
Rv0677c +0.7 1.4 Possible conserved membrane protein MmpS5 compare
Rv1064c +0.7 2.4 Possible lipoprotein LpqV compare
Rv2302 +0.7 0.4 Conserved protein compare
Rv3746c +0.7 1.5 Probable PE family protein PE34 (PE family-related protein) compare
Rv1067c +0.7 1.6 PE-PGRS family protein PE_PGRS19 compare
Rv2072c +0.7 0.8 Precorrin-6Y C(5,15)-methyltransferase (decarboxylating) CobL compare
Rv1441c +0.7 1.4 PE-PGRS family protein PE_PGRS26 compare
Rv3469c +0.7 2.0 Probable 4-hydroxy-2-oxovalerate aldolase MhpE (HOA) compare
Rv3706c +0.7 1.4 Conserved hypothetical proline rich protein compare


Specific Phenotypes

For 9 genes in this experiment

For stress Isoniazid in Mycobacterium tuberculosis H37Rv

For stress Isoniazid across organisms