Experiment set3IT091 for Shewanella sp. ANA-3

LB with 5-Hydroxymethylfurfural 10 mM

Group: stress
Media: LB + 5-Hydroxymethylfurfural (10 mM) + Dimethyl Sulfoxide (0.428571429 vol%)
Culturing: ANA3_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Jake on 5/15/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 927 C7,C8

Specific Phenotypes

For 2 genes in this experiment

For stress 5-Hydroxymethylfurfural in Shewanella sp. ANA-3

For stress 5-Hydroxymethylfurfural across organisms

SEED Subsystems

Subsystem	#Specific
Phosphate metabolism	1
Stringent Response, (p)ppGpp metabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Purine metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
polyphosphate metabolism	2	2	1
ppGpp metabolism	6	6	1