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Experiment set3IT090 for
Pseudomonas fluorescens FW300-N2E2
Compare to:
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outer cut, LB soft agar motility assay
Genes with
specific
phenotypes:
gene
name
fitness
t score
description
Pf6N2E2
_2585
-6.0
-9.2
Flagellar hook-length control protein FliK
conserved
Pf6N2E2
_5689
-5.0
-5.1
Flagellar biosynthesis protein FlgN
compare
Pf6N2E2
_2710
-5.0
-5.5
FIG00953701: hypothetical protein
compare
Pf6N2E2
_2575
-4.8
-10.3
Flagellar biosynthesis protein FlhF
compare
Pf6N2E2
_2602
-4.7
-10.7
Flagellin protein FlaA
compare
Pf6N2E2
_2569
-4.3
-11.0
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)
conserved
Pf6N2E2
_2622
-4.3
-11.4
Flagellar hook-associated protein FlgL
conserved
Pf6N2E2
_2564
-4.3
-5.1
Positive regulator of CheA protein activity (CheW)
conserved
Pf6N2E2
_2600
-4.3
-13.4
Flagellar hook-associated protein FliD
conserved
Pf6N2E2
_2599
-4.1
-7.7
Flagellar biosynthesis protein FliS
conserved
Pf6N2E2
_2563
-4.0
-13.1
FIG00953562: hypothetical protein
compare
Pf6N2E2
_2573
-3.9
-6.3
RNA polymerase sigma factor for flagellar operon
conserved
Pf6N2E2
_2623
-3.8
-9.4
Flagellar hook-associated protein FlgK
conserved
Pf6N2E2
_2570
-3.7
-7.2
Signal transduction histidine kinase CheA (EC 2.7.3.-)
conserved
Pf6N2E2
_2567
-3.4
-5.6
Flagellar motor rotation protein MotB
conserved
Pf6N2E2
_2565
-3.3
-7.5
CheW domain protein
conserved
Pf6N2E2
_2568
-3.2
-5.3
Flagellar motor rotation protein MotA
conserved
Pf6N2E2
_69
-3.1
-5.6
Probable type IV pilus assembly FimV-related transmembrane protein
conserved
Pf6N2E2
_2303
-2.5
-6.2
Aerotaxis receptor Aer
conserved
Pf6N2E2
_5893
-2.4
-5.8
FIG00956448: hypothetical protein
conserved
Pf6N2E2
_2566
-2.4
-5.2
Chromosome (plasmid) partitioning protein ParA
conserved
Pf6N2E2
_5693
-2.4
-5.7
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
conserved
Pf6N2E2
_5963
-2.2
-5.5
lipoprotein, putative
conserved
Pf6N2E2
_5390
-2.1
-6.5
Uricase (urate oxidase) (EC 1.7.3.3)
compare
Pf6N2E2
_5129
-1.8
-7.9
ClpB protein
conserved
Pf6N2E2
_583
-1.8
-6.7
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
compare
Pf6N2E2
_582
-1.8
-6.9
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
compare
Pf6N2E2
_5184
-1.7
-7.2
Chromosome segregation ATPases
conserved
Pf6N2E2
_3906
-1.6
-7.5
Transcription accessory protein (S1 RNA-binding domain)
conserved
Pf6N2E2
_4167
-1.6
-5.8
Zinc ABC transporter, ATP-binding protein ZnuC
conserved
Pf6N2E2
_2763
-1.4
-6.7
Predicted signal transduction protein
conserved
Pf6N2E2
_2596
-1.3
-5.3
Flagellar sensor histidine kinase FleS
conserved
Pf6N2E2
_584
-1.3
-6.3
ABC transporter, periplasmic substrate-binding protein
conserved
Pf6N2E2
_5278
+1.2
5.5
Signal transduction histidine kinase
compare
Pf6N2E2
_4926
+1.4
7.9
hypothetical protein
compare
Pf6N2E2
_4616
+1.5
5.4
type IV pilus biogenesis protein PilJ
conserved
Pf6N2E2
_816
+1.6
6.7
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
compare
Pf6N2E2
_2329
+1.7
7.9
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
conserved
Pf6N2E2
_818
+1.9
7.2
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
compare
Pf6N2E2
_815
+2.1
11.7
Signal transduction histidine kinase
compare
Pf6N2E2
_2601
+2.1
5.4
Flagellin protein FlaG
conserved
Pf6N2E2
_3871
+2.2
14.1
FIG00553872: hypothetical protein
compare
Pf6N2E2
_5872
+2.5
8.5
Sensor histidine kinase/response regulator
compare
Pf6N2E2
_3508
+2.5
16.5
Probable two-component response regulator
conserved
Pf6N2E2
_5873
+2.5
7.7
FIG00953467: hypothetical protein
compare
Pf6N2E2
_3827
+2.8
5.3
FIG00955429: hypothetical protein
conserved
Specific phenotypes for motility Agar across organisms