Experiment set3IT090 for Pseudomonas fluorescens FW300-N2E2

Compare to:

outer cut, LB soft agar motility assay

Group: motility
Media: LB + Agar (3 g/L)
Culturing: pseudo6_N2E2_ML5, Agar plate, Aerobic, at 30 (C), shaken=0 rpm, (Solid)
By: Mark on 3/14/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 46 genes in this experiment

For motility Agar in Pseudomonas fluorescens FW300-N2E2

For motility Agar across organisms

SEED Subsystems

Subsystem #Specific
Flagellum 13
Flagellar motility 7
Bacterial Chemotaxis 6
Two-component regulatory systems in Campylobacter 3
ABC transporter oligopeptide (TC 3.A.1.5.1) 2
Bacterial Cytoskeleton 1
Bacterial hemoglobins 1
Flagellum in Campylobacter 1
Plasmid replication 1
Protein chaperones 1
Proteolysis in bacteria, ATP-dependent 1
Transcription initiation, bacterial sigma factors 1
Transport of Zinc 1
Two cell division clusters relating to chromosome partitioning 1
ZZ gjo need homes 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
urate conversion to allantoin I 3 2 1
ureide biosynthesis 7 6 1
superpathway of purines degradation in plants 18 14 1