Experiment set3IT090 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with MreB Perturbing Compound A22 0.002 mg/ml

200 most important genes:

  gene name fitness t score description  
AO353_04565 -2.9 -5.9 nucleoid-associated protein compare
AO353_22685 -2.9 -4.8 peroxidase compare
AO353_13100 -2.9 -2.8 GTPase RsgA compare
AO353_09240 -2.8 -3.4 acetylglutamate kinase compare
AO353_12500 -2.7 -2.6 shikimate kinase compare
AO353_03580 -2.4 -4.0 ATP-dependent DNA helicase RuvB compare
AO353_20185 -2.2 -6.6 DNA-binding protein compare
AO353_27000 -2.1 -2.6 hypothetical protein compare
AO353_02685 -2.1 -4.4 phosphoribosylglycinamide formyltransferase compare
AO353_11750 -2.1 -2.8 ATPase compare
AO353_15170 -2.0 -3.3 cytochrome D ubiquinol oxidase subunit III compare
AO353_06415 -1.9 -4.7 hypothetical protein compare
AO353_02100 -1.9 -4.5 phosphoglycolate phosphatase compare
AO353_14420 -1.8 -4.3 molecular chaperone DnaK compare
AO353_03585 -1.8 -2.5 ATP-dependent DNA helicase RuvA compare
AO353_08980 -1.7 -3.4 heme biosynthesis operon protein HemX compare
AO353_07140 -1.7 -12.4 peptidase M23 compare
AO353_09000 -1.6 -5.0 argininosuccinate lyase compare
AO353_07155 -1.6 -6.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_16925 -1.6 -11.9 AmpG family muropeptide MFS transporter compare
AO353_06040 -1.6 -3.3 exodeoxyribonuclease V subunit alpha compare
AO353_10510 -1.6 -2.4 benzoate transporter compare
AO353_10930 -1.6 -7.2 DNA polymerase I compare
AO353_07910 -1.6 -3.1 hypothetical protein compare
AO353_00825 -1.6 -4.1 porin compare
AO353_07295 -1.6 -10.6 aminoglycoside phosphotransferase compare
AO353_16805 -1.5 -5.1 recombinase RecA compare
AO353_08685 -1.5 -6.7 N-acetylglutamate synthase compare
AO353_12115 -1.5 -2.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_12935 -1.5 -4.1 glycosyltransferase compare
AO353_08165 -1.5 -2.9 pyrroline-5-carboxylate reductase compare
AO353_21625 -1.5 -2.6 Fe/S biogenesis protein NfuA compare
AO353_20860 -1.4 -3.1 hypothetical protein compare
AO353_26945 -1.4 -2.3 transcriptional regulator compare
AO353_06495 -1.4 -4.7 gamma-glutamyl phosphate reductase compare
AO353_14220 -1.4 -1.4 ribosomal large subunit pseudouridine synthase D compare
AO353_12690 -1.4 -1.2 acyl carrier protein compare
AO353_07105 -1.3 -1.4 biotin--protein ligase compare
AO353_09320 -1.3 -6.9 ATP-dependent DNA helicase RecG compare
AO353_20510 -1.3 -2.0 amidase compare
AO353_05225 -1.3 -9.8 hypothetical protein compare
AO353_07145 -1.3 -7.7 anhydro-N-acetylmuramic acid kinase compare
AO353_03590 -1.3 -3.0 crossover junction endodeoxyribonuclease RuvC compare
AO353_21455 -1.3 -1.2 cation:proton antiporter compare
AO353_17175 -1.2 -2.0 beta-ketoadipyl CoA thiolase compare
AO353_03710 -1.2 -2.4 formyltetrahydrofolate deformylase compare
AO353_06050 -1.2 -5.1 exodeoxyribonuclease V subunit gamma compare
AO353_07355 -1.2 -4.4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_10730 -1.2 -1.5 hypothetical protein compare
AO353_02280 -1.2 -1.7 DNA mismatch repair protein MutS compare
AO353_10055 -1.2 -7.8 DNA helicase II compare
AO353_06045 -1.2 -5.0 exodeoxyribonuclease V subunit beta compare
AO353_11730 -1.2 -6.3 glutamate--cysteine ligase compare
AO353_18980 -1.2 -3.2 DoxX family protein compare
AO353_10455 -1.2 -2.0 tRNA modification GTPase MnmE compare
AO353_05240 -1.1 -2.0 rod shape-determining protein MreD compare
AO353_15250 -1.1 -2.5 cytochrome B compare
AO353_12535 -1.1 -3.0 hypothetical protein compare
AO353_15905 -1.1 -4.9 outer membrane protein assembly factor BamB compare
AO353_08115 -1.1 -4.2 energy transducer TonB compare
AO353_27160 -1.1 -2.9 Pathogenicity locus compare
AO353_27650 -1.1 -3.5 cell division protein FtsK compare
AO353_00455 -1.1 -2.6 beta-hexosaminidase compare
AO353_23400 -1.1 -2.1 hypothetical protein compare
AO353_28725 -1.1 -2.9 hypothetical protein compare
AO353_07290 -1.1 -5.6 mannose-1-phosphate guanylyltransferase compare
AO353_19145 -1.0 -3.1 protease HtpX compare
AO353_05690 -1.0 -2.6 SsrA-binding protein compare
AO353_08880 -1.0 -2.1 exopolyphosphatase compare
AO353_12350 -1.0 -2.7 preprotein translocase compare
AO353_07325 -1.0 -1.5 diadenosine tetraphosphatase compare
AO353_03830 -1.0 -2.2 antibiotic biosynthesis monooxygenase compare
AO353_06460 -1.0 -5.0 hypothetical protein compare
AO353_10945 -1.0 -2.3 cytochrome C compare
AO353_04355 -1.0 -1.7 homoserine dehydrogenase compare
AO353_23945 -1.0 -2.0 hypothetical protein compare
AO353_07315 -1.0 -1.6 rRNA methyltransferase compare
AO353_08775 -1.0 -1.5 cell division protein ZapA compare
AO353_19310 -1.0 -1.9 enoyl-CoA hydratase compare
AO353_08110 -1.0 -4.2 glutathione synthetase compare
AO353_12835 -1.0 -2.2 hypothetical protein compare
AO353_02250 -1.0 -2.3 chorismate synthase compare
AO353_22025 -1.0 -1.7 iron-sulfur cluster repair di-iron protein compare
AO353_08640 -1.0 -2.4 hypothetical protein compare
AO353_09030 -1.0 -1.5 iron donor protein CyaY compare
AO353_04365 -1.0 -3.4 recombinase XerD compare
AO353_05510 -1.0 -4.9 N-acetyl-anhydromuranmyl-L-alanine amidase compare
AO353_05280 -0.9 -2.0 4-carboxymuconolactone decarboxylase compare
AO353_09690 -0.9 -2.4 hypothetical protein compare
AO353_04190 -0.9 -1.5 glycerol-3-phosphate dehydrogenase compare
AO353_15270 -0.9 -3.0 phospholipid-binding protein compare
AO353_15290 -0.9 -4.2 methyltransferase compare
AO353_26620 -0.9 -2.8 ArsR family transcriptional regulator compare
AO353_12090 -0.9 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
AO353_03420 -0.9 -3.1 phosphogluconate dehydratase compare
AO353_12145 -0.9 -2.6 nitrogen regulation protein NR(I) compare
AO353_02640 -0.9 -1.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_12420 -0.9 -2.5 predicted FeS cluster maintenance protein (from data) compare
AO353_14115 -0.9 -4.0 gamma-glutamyl kinase compare
AO353_04035 -0.9 -2.6 exclusion suppressor FxsA compare
AO353_23405 -0.9 -1.6 hypothetical protein compare
AO353_05550 -0.9 -3.7 pseudouridine synthase compare
AO353_12075 -0.9 -4.0 imidazole glycerol phosphate synthase subunit HisH compare
AO353_12915 -0.9 -4.4 carbamoyltransferase compare
AO353_11775 -0.9 -4.2 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_00605 -0.9 -4.1 cytochrome C oxidase Cbb3 compare
AO353_27210 -0.9 -3.9 hypothetical protein compare
AO353_14495 -0.9 -5.5 acetolactate synthase 3 catalytic subunit compare
AO353_02690 -0.9 -5.2 dehydrogenase compare
AO353_00495 -0.9 -1.4 DNA topoisomerase I compare
AO353_12910 -0.9 -2.6 hypothetical protein compare
AO353_08975 -0.8 -3.8 heme biosynthesis protein HemY compare
AO353_00835 -0.8 -3.5 transporter compare
AO353_00460 -0.8 -2.1 TetR family transcriptional regulator compare
AO353_18170 -0.8 -3.9 aspartyl beta-hydroxylase compare
AO353_24405 -0.8 -1.8 ArsR family transcriptional regulator compare
AO353_06540 -0.8 -1.8 hypothetical protein compare
AO353_23165 -0.8 -2.2 cupin compare
AO353_23140 -0.8 -2.4 aspartate dehydrogenase compare
AO353_07270 -0.8 -2.0 transcriptional regulator compare
AO353_19610 -0.8 -1.8 hypothetical protein compare
AO353_21640 -0.8 -1.6 cobalt transporter compare
AO353_15730 -0.8 -1.9 hypothetical protein compare
AO353_19500 -0.8 -2.3 peptidase S8 and S53 subtilisin kexin sedolisin compare
AO353_03815 -0.8 -0.6 heme utilization protein compare
AO353_13225 -0.8 -1.8 50S ribosomal protein L9 compare
AO353_09900 -0.8 -5.2 phosphate ABC transporter permease compare
AO353_15885 -0.8 -2.8 Cro/Cl family transcriptional regulator compare
AO353_14150 -0.8 -1.2 peptidylprolyl isomerase compare
AO353_27950 -0.8 -1.0 hypothetical protein compare
AO353_02070 -0.8 -3.7 prephenate dehydratase compare
AO353_03770 -0.8 -2.7 hypothetical protein compare
AO353_01915 -0.8 -1.3 GlcG protein compare
AO353_07235 -0.8 -4.0 phosphoglycolate phosphatase compare
AO353_27550 -0.7 -1.5 hypothetical protein compare
AO353_13685 -0.7 -2.4 3-dehydroquinate dehydratase compare
AO353_25925 -0.7 -1.1 hypothetical protein compare
AO353_24440 -0.7 -1.7 reactive intermediate/imine deaminase compare
AO353_15410 -0.7 -0.9 hypothetical protein compare
AO353_01035 -0.7 -2.0 hypothetical protein compare
AO353_26195 -0.7 -1.8 hypothetical protein compare
AO353_18130 -0.7 -1.6 hypothetical protein compare
AO353_28200 -0.7 -1.3 ribosomal protein S3AE compare
AO353_07935 -0.7 -2.3 hypothetical protein compare
AO353_13200 -0.7 -4.8 exoribonuclease R compare
AO353_00115 -0.7 -1.7 hypothetical protein compare
AO353_28535 -0.7 -2.9 AraC family transcriptional regulator compare
AO353_27010 -0.7 -1.4 alpha-ketoglutarate-dependent dioxygenase compare
AO353_09905 -0.7 -4.0 phosphate-binding protein compare
AO353_11945 -0.7 -0.9 4-oxalocrotonate tautomerase compare
AO353_03945 -0.7 -2.2 hypothetical protein compare
AO353_15555 -0.7 -2.2 fumarylacetoacetase compare
AO353_12570 -0.7 -1.8 type II secretion system protein GspI compare
AO353_01410 -0.7 -1.7 ribonuclease E compare
AO353_05010 -0.7 -1.5 HopJ type III effector protein compare
AO353_15605 -0.7 -2.8 histidine kinase compare
AO353_12015 -0.7 -1.5 antitoxin compare
AO353_09950 -0.7 -2.4 aspartate ammonia-lyase compare
AO353_13395 -0.7 -1.4 protein hupE compare
AO353_02440 -0.7 -4.6 peptidase S41 compare
AO353_23590 -0.7 -1.4 ArsR family transcriptional regulator compare
AO353_18175 -0.7 -2.9 multidrug DMT transporter permease compare
AO353_09745 -0.7 -0.9 hypothetical protein compare
AO353_15460 -0.7 -3.3 cytochrome o ubiquinol oxidase subunit III compare
AO353_18600 -0.7 -2.1 flagellar basal-body rod protein FlgG compare
AO353_09050 -0.7 -2.0 recombinase XerC compare
AO353_17035 -0.6 -2.3 hypothetical protein compare
AO353_05425 -0.6 -2.4 glycine/betaine ABC transporter permease compare
AO353_06480 -0.6 -1.8 50S rRNA methyltransferase compare
AO353_09315 -0.6 -3.7 LysR family transcriptional regulator compare
AO353_16810 -0.6 -1.5 recombinase RecX compare
AO353_28700 -0.6 -1.8 hypothetical protein compare
AO353_10995 -0.6 -4.1 hypothetical protein compare
AO353_16440 -0.6 -1.6 ArsC family transcriptional regulator compare
AO353_05195 -0.6 -4.1 glmZ(sRNA)-inactivating NTPase compare
AO353_00660 -0.6 -1.5 transcriptional regulator compare
AO353_00650 -0.6 -1.4 cytochrome biogenesis protein compare
AO353_25700 -0.6 -1.1 hypothetical protein compare
AO353_00105 -0.6 -1.0 hypothetical protein compare
AO353_10780 -0.6 -1.1 DNA-binding protein compare
AO353_15875 -0.6 -2.4 23S rRNA (adenine(2503)-C2)-methyltransferase compare
AO353_17300 -0.6 -3.0 antibiotic transporter compare
AO353_12930 -0.6 -1.4 GlcNAc-PI de-N-acetylase compare
AO353_05325 -0.6 -2.4 GntR family transcriptional regulator compare
AO353_00725 -0.6 -2.7 GntR family transcriptional regulator compare
AO353_17940 -0.6 -1.7 hypothetical protein compare
AO353_26575 -0.6 -2.1 dihydropyrimidine dehydrogenase compare
AO353_16765 -0.6 -1.4 hypothetical protein compare
AO353_02345 -0.6 -2.1 purine permease compare
AO353_13460 -0.6 -1.9 phosphate starvation-inducible protein PsiF compare
AO353_12130 -0.6 -2.1 preprotein translocase subunit SecB compare
AO353_21110 -0.6 -1.2 hypothetical protein compare
AO353_11455 -0.6 -1.4 hypothetical protein compare
AO353_19325 -0.6 -2.5 2,4-dienoyl-CoA reductase compare
AO353_10500 -0.6 -1.9 acetylornithine aminotransferase compare
AO353_17445 -0.6 -1.0 hypothetical protein compare
AO353_24490 -0.6 -3.0 osmotically inducible protein OsmC compare
AO353_12345 -0.6 -1.1 twin-arginine protein translocation system subunit TatC compare
AO353_02470 -0.6 -2.4 Cro/Cl family transcriptional regulator compare
AO353_09890 -0.6 -2.2 phosphate ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens FW300-N2E3 in stress experiments

For stress MreB Perturbing Compound A22 across organisms