Experiment set3IT089 for Methanococcus maripaludis S2

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08860 +0.9 6.1 MinD/ParA family protein compare
MMP_RS08940 +0.8 2.2 MetS family NSS transporter small subunit compare
MMP_RS01290 +0.8 6.9 class III signal peptide-containing protein compare
MMP_RS08615 +0.8 2.1 flagellar protein G compare
MMP_RS08855 +0.7 5.5 hypothetical protein compare
MMP_RS01305 +0.7 6.5 hypothetical protein compare
MMP_RS01280 +0.7 6.2 DUF515 domain-containing protein compare
MMP_RS01285 +0.7 5.9 hypothetical protein compare
MMP_RS01195 +0.7 1.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00245 +0.7 6.1 type II secretion system F family protein compare
MMP_RS08675 +0.7 3.1 class III signal peptide-containing protein compare
MMP_RS01315 +0.7 6.2 DUF2341 domain-containing protein compare
MMP_RS01310 +0.6 6.1 hypothetical protein compare
MMP_RS00240 +0.6 5.8 type II secretion system F family protein compare
MMP_RS00250 +0.6 5.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01270 +0.6 5.6 prepilin peptidase compare
MMP_RS01295 +0.6 5.3 hypothetical protein compare
MMP_RS01085 +0.6 2.0 hypothetical protein compare
MMP_RS09055 +0.6 1.1 CAP domain-containing protein compare
MMP_RS01075 +0.6 1.9 hypothetical protein compare
MMP_RS00570 +0.6 1.3 protein-L-isoaspartate O-methyltransferase compare
MMP_RS06760 +0.5 1.9 hypothetical protein compare
MMP_RS01275 +0.5 3.1 class III signal peptide-containing protein compare
MMP_RS08580 +0.5 3.8 flagellin compare
MMP_RS00130 +0.5 1.1 nickel-responsive transcriptional regulator NikR compare
MMP_RS01790 +0.5 3.9 restriction endonuclease compare
MMP_RS05865 +0.5 1.4 hypothetical protein compare
MMP_RS07415 +0.5 2.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS04145 +0.5 1.4 hypothetical protein compare
MMP_RS05985 +0.5 1.7 hypothetical protein compare
MMP_RS01320 +0.4 2.1 hypothetical protein compare
MMP_RS01675 +0.4 1.3 hypothetical protein compare
MMP_RS03080 +0.4 1.1 universal stress protein compare
MMP_RS00535 +0.4 2.1 TIGR00375 family protein compare
MMP_RS07765 +0.4 2.5 sodium:alanine symporter family protein compare
MMP_RS05635 +0.4 2.9 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06840 +0.4 0.6 DNA-directed RNA polymerase subunit N compare
MMP_RS04205 +0.4 2.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS01630 +0.4 2.6 N-glycosylase/DNA lyase compare
MMP_RS07615 +0.4 2.6 energy-coupling factor ABC transporter permease compare
MMP_RS04410 +0.4 1.9 hypothetical protein compare
MMP_RS06720 +0.4 2.3 response regulator transcription factor compare
MMP_RS08845 +0.4 2.8 archaellum operon transcriptional activator EarA family protein compare
MMP_RS02530 +0.3 1.9 type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family compare
MMP_RS05365 +0.3 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01255 +0.3 2.5 amino acid ABC transporter ATP-binding protein compare
MMP_RS07775 +0.3 1.5 alanine dehydrogenase compare
MMP_RS02605 +0.3 0.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08850 +0.3 3.0 hypothetical protein compare
MMP_RS03550 +0.3 0.9 DUF2124 domain-containing protein compare
MMP_RS01125 +0.3 1.9 thioredoxin family protein compare
MMP_RS02020 +0.3 1.7 gamma-glutamylcyclotransferase compare
MMP_RS04125 +0.3 1.4 TetR/AcrR family transcriptional regulator compare
MMP_RS02295 +0.3 2.4 TatD family hydrolase compare
MMP_RS03625 +0.3 2.1 cell wall-binding protein compare
MMP_RS02255 +0.3 2.3 hypothetical protein compare
MMP_RS07960 +0.3 2.2 sugar phosphate isomerase/epimerase compare
MMP_RS07880 +0.3 1.8 AAA family ATPase compare
MMP_RS08400 +0.3 0.8 MJ0307 family thioredoxin compare
MMP_RS06685 +0.3 2.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01105 +0.3 2.1 hypothetical protein compare
MMP_RS08830 +0.3 1.5 GTP-binding protein compare
MMP_RS06050 +0.3 1.9 ZIP family metal transporter compare
MMP_RS07550 +0.3 1.8 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS08390 +0.3 1.8 DUF5400 domain-containing protein compare
MMP_RS08130 +0.3 2.1 IGHMBP2 family helicase compare
MMP_RS00140 +0.3 1.9 DUF192 domain-containing protein compare
MMP_RS06715 +0.3 2.3 cache domain-containing protein compare
MMP_RS07640 +0.3 1.8 mechanosensitive ion channel family protein compare
MMP_RS04610 +0.3 1.6 Dabb family protein compare
MMP_RS08410 +0.3 1.5 DUF169 domain-containing protein compare
MMP_RS06735 +0.3 1.6 class I SAM-dependent rRNA methyltransferase compare
MMP_RS00655 +0.3 1.3 hypothetical protein compare
MMP_RS06385 +0.3 1.2 hypothetical protein compare
MMP_RS05715 +0.3 1.8 hypothetical protein compare
MMP_RS02705 +0.3 1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08380 +0.3 1.5 phosphatase PAP2 family protein compare
MMP_RS07840 +0.3 1.0 ribonuclease III compare
MMP_RS06320 +0.3 1.6 hypothetical protein compare
MMP_RS08750 +0.3 0.6 hypothetical protein compare
MMP_RS09045 +0.3 2.2 class III signal peptide-containing protein compare
MMP_RS01870 +0.3 1.5 acyl-CoA dehydratase activase compare
MMP_RS05975 +0.3 0.7 hypothetical protein compare
MMP_RS03895 +0.3 1.3 hypothetical protein compare
MMP_RS08310 +0.3 0.9 TMEM165/GDT1 family protein compare
MMP_RS08485 +0.3 1.9 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08405 +0.3 1.9 MFS transporter compare
MMP_RS06035 +0.3 2.1 glycosyltransferase family 2 protein compare
MMP_RS05085 +0.2 1.7 AAA family ATPase compare
MMP_RS02805 +0.2 0.6 HEPN domain-containing protein compare
MMP_RS02770 +0.2 1.3 hypothetical protein compare
MMP_RS01090 +0.2 1.8 ABC transporter substrate-binding protein compare
MMP_RS08080 +0.2 1.5 YchF/TatD family DNA exonuclease compare
MMP_RS05830 +0.2 0.9 peptidyl-prolyl cis-trans isomerase compare
MMP_RS00945 +0.2 0.6 PadR family transcriptional regulator compare
MMP_RS08980 +0.2 1.3 hypothetical protein compare
MMP_RS01250 +0.2 1.0 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS01635 +0.2 1.3 thiamine pyrophosphate-dependent enzyme compare
MMP_RS02495 +0.2 1.1 hypothetical protein compare
MMP_RS02320 +0.2 1.7 glutamate-cysteine ligase family protein compare
MMP_RS07330 +0.2 2.2 membrane protein compare
MMP_RS00090 +0.2 1.0 CoA-binding protein compare
MMP_RS02735 +0.2 1.4 MBL fold metallo-hydrolase compare
MMP_RS07900 +0.2 0.6 YeeE/YedE family protein compare
MMP_RS01655 +0.2 1.1 DsrE family protein compare
MMP_RS06335 +0.2 1.3 HAD family hydrolase compare
MMP_RS05780 +0.2 1.8 multidrug resistance efflux transporter family protein compare
MMP_RS04255 +0.2 1.2 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08320 +0.2 1.6 molybdopterin molybdotransferase MoeA compare
MMP_RS08665 +0.2 1.9 hypothetical protein compare
MMP_RS06300 +0.2 1.4 ABC transporter substrate-binding protein compare
MMP_RS07805 +0.2 1.4 ABC transporter permease compare
MMP_RS05235 +0.2 1.5 exodeoxyribonuclease III compare
MMP_RS00710 +0.2 1.3 hypothetical protein compare
MMP_RS02675 +0.2 0.7 hypothetical protein compare
MMP_RS01185 +0.2 1.5 hypothetical protein compare
MMP_RS08395 +0.2 1.1 DsrE family protein compare
MMP_RS01850 +0.2 1.2 phosphate ABC transporter substrate-binding protein compare
MMP_RS07155 +0.2 1.8 MFS transporter compare
MMP_RS08250 +0.2 1.5 pyruvate kinase compare
MMP_RS07925 +0.2 1.3 haloacid dehalogenase compare
MMP_RS06140 +0.2 0.9 radical SAM protein compare
MMP_RS09030 +0.2 1.4 hypothetical protein compare
MMP_RS07150 +0.2 1.1 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08275 +0.2 1.5 hypothetical protein compare
MMP_RS06465 +0.2 1.8 NERD domain-containing protein compare
MMP_RS03585 +0.2 1.0 Hsp20/alpha crystallin family protein compare
MMP_RS07620 +0.2 1.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01135 +0.2 1.5 molybdate ABC transporter substrate-binding protein compare
MMP_RS00120 +0.2 1.2 LysR family transcriptional regulator compare
MMP_RS07800 +0.2 1.1 ATP-binding cassette domain-containing protein compare
MMP_RS03530 +0.2 1.5 tetratricopeptide repeat protein compare
MMP_RS08290 +0.2 1.4 DNA-binding protein Alba compare
MMP_RS00345 +0.2 1.0 DUF2666 domain-containing protein compare
MMP_RS07085 +0.2 1.3 ribonuclease HII compare
MMP_RS06910 +0.2 1.2 RlmF-related methyltransferase compare
MMP_RS04995 +0.2 1.4 hypothetical protein compare
MMP_RS08640 +0.2 1.5 TIM barrel protein compare
MMP_RS05965 +0.2 0.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS02385 +0.2 1.4 ATP-binding protein compare
MMP_RS00400 +0.2 1.5 tributyrin esterase compare
MMP_RS05090 +0.2 1.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS02920 +0.2 1.6 DMT family transporter compare
MMP_RS01650 +0.2 0.3 sulfurtransferase TusA family protein compare
MMP_RS07715 +0.2 1.5 YfcE family phosphodiesterase compare
MMP_RS06345 +0.2 1.4 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS03845 +0.2 1.2 DNA adenine methylase compare
MMP_RS02610 +0.2 1.0 DUF2162 domain-containing protein compare
MMP_RS04190 +0.2 1.3 hypothetical protein compare
MMP_RS06965 +0.2 1.4 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS06155 +0.2 0.7 DUF4186 domain-containing protein compare
MMP_RS02260 +0.2 1.4 lactate utilization protein compare
MMP_RS07675 +0.2 1.7 S-layer protein compare
MMP_RS06665 +0.2 1.3 glycogen/starch synthase compare
MMP_RS06700 +0.2 1.5 hypothetical protein compare
MMP_RS04100 +0.2 0.9 hypothetical protein compare
MMP_RS06585 +0.2 0.6 DMT family protein compare
MMP_RS05770 +0.2 1.1 YkgJ family cysteine cluster protein compare
MMP_RS07095 +0.2 0.9 PspC domain-containing protein compare
MMP_RS03090 +0.2 1.3 cation:proton antiporter compare
MMP_RS05050 +0.2 1.5 substrate-binding domain-containing protein compare
MMP_RS07115 +0.2 1.1 MBL fold metallo-hydrolase compare
MMP_RS02625 +0.2 1.2 ribonuclease H-like domain-containing protein compare
MMP_RS08325 +0.2 1.5 hypothetical protein compare
MMP_RS08205 +0.2 1.4 stage II sporulation protein M compare
MMP_RS08385 +0.2 0.9 ABC transporter substrate-binding protein compare
MMP_RS03765 +0.2 1.2 CopG family ribbon-helix-helix protein compare
MMP_RS04030 +0.2 1.2 hypothetical protein compare
MMP_RS07590 +0.2 1.4 hypothetical protein compare
MMP_RS04220 +0.2 1.4 queuosine precursor transporter compare
MMP_RS01765 +0.2 0.8 HIT family protein compare
MMP_RS06560 +0.2 1.3 hypothetical protein compare
MMP_RS01770 +0.2 1.4 ATP-dependent endonuclease compare
MMP_RS06015 +0.2 0.8 flavodoxin family protein compare
MMP_RS03900 +0.2 1.2 minichromosome maintenance protein MCM compare
MMP_RS06115 +0.2 1.3 class II aldolase/adducin family protein compare
MMP_RS01570 +0.2 0.4 hypothetical protein compare
MMP_RS06175 +0.2 1.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS03785 +0.2 1.0 cupin domain-containing protein compare
MMP_RS05095 +0.2 1.1 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS02215 +0.2 1.2 ECF transporter S component compare
MMP_RS02545 +0.2 0.7 hypothetical protein compare
MMP_RS06515 +0.2 0.8 UPF0489 family protein compare
MMP_RS04735 +0.2 1.1 tautomerase family protein compare
MMP_RS06680 +0.2 1.5 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01200 +0.2 0.8 hypothetical protein compare
MMP_RS02290 +0.2 1.1 MBL fold metallo-hydrolase compare
MMP_RS08160 +0.2 0.9 EamA family transporter compare
MMP_RS03125 +0.2 1.0 cell division ATPase MinD compare
MMP_RS00675 +0.2 0.2 nitroreductase family protein compare
MMP_RS07770 +0.2 0.9 alanine racemase compare
MMP_RS07625 +0.2 0.5 cobalt ECF transporter T component CbiQ compare
MMP_RS08075 +0.2 1.0 DUF749 domain-containing protein compare
MMP_RS03485 +0.2 0.9 TIGR00267 family protein compare
MMP_RS02850 +0.2 1.2 hypothetical protein compare
MMP_RS04020 +0.2 0.7 hypothetical protein compare
MMP_RS03565 +0.2 1.1 uracil phosphoribosyltransferase compare
MMP_RS08670 +0.2 0.9 metallophosphoesterase compare
MMP_RS07895 +0.2 0.7 cytochrome c compare
MMP_RS06305 +0.2 1.0 transporter substrate-binding domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms