Experiment set3IT087 for Caulobacter crescentus NA1000

Compare to:

PYE with Paraquat dichloride 0.015 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CCNA_03858 +4.8 34.0 protein translocase subunit secB compare
CCNA_02037 +4.1 28.3 ATP-dependent endopeptidase Lon compare
CCNA_01525 +4.1 18.0 flagellar biosynthesis repressor flbT compare
CCNA_02387 +4.0 28.7 glutathione reductase compare
CCNA_01059 +3.9 20.2 S-layer protein rsaA compare
CCNA_01060 +3.6 16.8 type I protein secretion ATP-binding protein RsaD compare
CCNA_02030 +3.6 15.0 hypothetical protein compare
CCNA_01061 +3.6 14.8 type I secretion adaptor protein RsaE compare
CCNA_02448 +3.4 19.8 hypothetical protein compare
CCNA_02028 +3.3 8.9 NTF2 superfamily protein compare
CCNA_02026 +3.2 21.9 hypothetical protein compare
CCNA_00011 +3.2 6.7 chaperone protein DnaJ compare
CCNA_02732 +3.1 10.8 hypothetical protein compare
CCNA_02000 +3.0 6.4 SSU ribosomal protein S2P compare
CCNA_02225 +3.0 16.8 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_01712 +3.0 25.3 CopY/TcrY family transcriptional repressor compare
CCNA_00296 +3.0 17.6 phosphate regulon response regulator PhoB compare
CCNA_02447 +2.9 17.7 PspA/IM30 family regulatory protein compare
CCNA_03043 +2.8 8.4 type IV pilin protein pilA compare
CCNA_01979 +2.8 12.6 LexA repressor compare
CCNA_00699 +2.7 13.7 LSU ribosomal protein L28P compare
CCNA_01058 +2.7 12.3 helix-turn-helix transcriptional regulator compare
CCNA_00497 +2.7 15.6 putative rhamnosyl transferase compare
CCNA_00518 +2.7 15.7 LSU ribosomal protein L25P compare
CCNA_02328 +2.7 2.0 cell cycle regulatory protein GcrA compare
CCNA_01553 +2.7 12.3 undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase compare
CCNA_03689 +2.7 15.8 alanine dehydrogenase compare
CCNA_02980 +2.7 16.8 tryptophan 2,3-dioxygenase compare
CCNA_02957 +2.7 11.6 ArsR-family transcriptional regulator compare
CCNA_01815 +2.6 18.8 nitrogen assimilation regulatory protein NtrC compare
CCNA_00521 +2.6 7.2 antitoxin protein compare
CCNA_00756 +2.6 4.8 hypothetical protein compare
CCNA_02103 +2.6 21.5 hypothetical protein compare
CCNA_03643 +2.6 4.4 succinate dehydrogenase membrane anchor subunit compare
CCNA_01526 +2.5 10.0 flagellar biosynthesis regulatory protein flaF compare
CCNA_01780 +2.5 18.7 exopolyphosphatase compare
CCNA_00846 +2.5 20.5 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03064 +2.5 9.8 PadR-family transcriptional regulator compare
CCNA_02576 +2.5 17.4 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_03289 +2.5 16.7 HicB-family RNA-binding protein compare
CCNA_01751 +2.5 11.8 aminodeoxychorismate lyase compare
CCNA_02242 +2.4 17.1 PHB granule-associated protein, phasin2 compare
CCNA_01814 +2.4 17.2 nitrogen regulation protein ntrB compare
CCNA_01242 +2.4 16.4 amino acid permease compare
CCNA_01968 +2.4 6.4 pentapeptide repeats containing protein compare
CCNA_02025 +2.4 9.1 hypothetical protein compare
CCNA_03252 +2.4 19.6 CopY/TcrY-family transcriptional regulator compare
CCNA_03863 +2.4 5.8 hypothetical protein compare
CCNA_02553 +2.4 18.0 ATP-dependent clp protease ATP-binding subunit ClpA compare
CCNA_01851 +2.4 18.4 quinol cytochrome oxidase polypeptide II compare
CCNA_00769 +2.4 10.8 TetR family transcriptional regulator compare
CCNA_03129 +2.4 14.5 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00939 +2.3 9.0 MarR-family transcriptional regulator compare
CCNA_01840 +2.3 18.7 MerR-family transcriptional regulator compare
CCNA_02324 +2.3 13.2 heat shock protein 33 hsp33 compare
CCNA_03612 +2.3 12.1 HTH XRE-family transcriptional regulator compare
CCNA_01199 +2.3 13.2 glucose-1-phosphate thymidylyltransferase compare
CCNA_03961 +2.3 11.8 hypothetical protein compare
CCNA_02646 +2.3 5.0 cell division protein MraZ compare
CCNA_02199 +2.3 17.3 methyltransferase compare
CCNA_00153 +2.3 11.1 adenine nucleotide exchange factor GrpE compare
CCNA_02339 +2.3 13.6 methyltransferase compare
CCNA_01453 +2.3 7.1 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_R0037 +2.3 7.4 tRNA-Glu compare
CCNA_03824 +2.2 14.4 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_00161 +2.2 13.9 hypothetical protein compare
CCNA_02171 +2.2 15.0 nucleoside permease nupC compare
CCNA_02619 +2.2 16.4 stomatin/prohibitin-related protein compare
CCNA_00162 +2.2 15.1 hypothetical protein compare
CCNA_00505 +2.2 10.0 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01964 +2.2 8.2 NADH dehydrogenase compare
CCNA_01931 +2.2 13.4 TetR-family transcriptional regulator compare
CCNA_00527 +2.2 12.6 hypothetical protein compare
CCNA_02941 +2.2 7.6 transcription elongation factor greA compare
CCNA_00215 +2.2 11.7 SapC surface layer protein compare
CCNA_01295 +2.2 12.9 integral membrane protein compare
CCNA_01086 +2.2 13.9 GTP-binding protein lepA compare
CCNA_03805 +2.2 13.1 PadR-family transcriptional regulator compare
CCNA_00924 +2.2 15.7 MarR/EmrR family transcriptional regulator compare
CCNA_03287 +2.2 16.3 PadR-family transcriptional regulator compare
CCNA_02644 +2.1 6.8 cell division protein FtsL compare
CCNA_00872 +2.1 6.0 glutaredoxin compare
CCNA_01420 +2.1 7.8 NrdR family transcriptional regulator compare
CCNA_03519 +2.1 9.9 PadR-family transcriptional regulator compare
CCNA_01181 +2.1 11.1 hypothetical protein compare
CCNA_00950 +2.1 16.1 flagellar M-ring protein FliF compare
CCNA_01094 +2.1 5.3 hypothetical protein compare
CCNA_03325 +2.1 8.8 hypothetical protein compare
CCNA_02910 +2.1 17.1 TonB-dependent receptor compare
CCNA_03989 +2.1 15.9 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_03808 +2.1 15.4 organic solvent resistance transport system Ttg2C protein compare
CCNA_03271 +2.1 14.4 methionine gamma-lyase compare
CCNA_01393 +2.1 14.6 soluble lytic murein transglycosylase compare
CCNA_03280 +2.1 17.7 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01801 +2.1 9.5 hypothetical protein compare
CCNA_00389 +2.1 2.7 aminomethyltransferase family protein compare
CCNA_02575 +2.0 5.3 hypothetical protein compare
CCNA_01573 +2.0 10.7 ArsR-family transcriptional regulator compare
CCNA_02416 +2.0 11.4 DNA-binding protein HU compare
CCNA_00781 +2.0 14.4 two-component receiver protein CpdR compare
CCNA_02021 +2.0 8.8 hypothetical protein compare
CCNA_01186 +2.0 9.9 hypothetical protein compare
CCNA_00999 +2.0 7.4 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_03479 +2.0 11.6 MarR-family transcriptional regulator compare
CCNA_02075 +2.0 3.4 peptidoglycan binding endopeptidase DipM compare
CCNA_03215 +2.0 12.8 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_03062 +2.0 12.3 cell wall hydrolase family protein compare
CCNA_02567 +2.0 13.2 sensory transduction histidine kinase pleC compare
CCNA_02081 +2.0 7.9 Sec-independent protein translocase protein tatB compare
CCNA_01361 +2.0 4.7 PepSY superfamily protein compare
CCNA_01603 +2.0 10.6 aspartate aminotransferase compare
CCNA_03951 +1.9 10.8 hypothetical protein compare
CCNA_02552 +1.9 6.5 ATP-dependent Clp protease adaptor protein ClpS compare
CCNA_03681 +1.9 12.9 ABC transporter ATP-binding protein compare
CCNA_02243 +1.9 13.5 D-alanyl-D-alanine serine-type carboxypeptidase compare
CCNA_01681 +1.9 7.6 RimI-like acetyltransferase compare
CCNA_03464 +1.9 12.8 glycine cleavage system H protein compare
CCNA_02419 +1.9 7.4 TonB1 protein compare
CCNA_01164 +1.9 12.8 O-linked N-acetylglucosamine transferase compare
CCNA_03123 +1.9 11.9 ArsR-family transcriptional regulator compare
CCNA_00895 +1.8 10.0 hypothetical protein compare
CCNA_00834 +1.8 8.5 flagellin FljM compare
CCNA_01763 +1.8 10.7 multifunctional aminopeptidase compare
CCNA_03108 +1.8 14.6 TonB-dependent outer membrane receptor compare
CCNA_02617 +1.8 13.9 histidinol-phosphate aminotransferase compare
CCNA_01913 +1.8 12.1 MarR-family transcriptional regulator compare
CCNA_03136 +1.8 7.1 flagellar export protein FliJ compare
CCNA_00079 +1.8 6.7 MerR-family transcriptional regulator compare
CCNA_03936 +1.8 6.4 hypothetical protein compare
CCNA_03680 +1.8 16.0 aminopeptidase N compare
CCNA_01065 +1.8 10.6 glycosyltransferase compare
CCNA_03401 +1.8 8.3 conserved hypothetical cytosolic protein compare
CCNA_00953 +1.8 5.8 flagellar motor switch protein FliN compare
CCNA_03806 +1.8 12.0 outer membrane lipoprotein compare
CCNA_01528 +1.7 9.8 flagellin fljK compare
CCNA_01826 +1.7 9.9 vitamin B12 receptor compare
CCNA_00951 +1.7 11.1 flagellar motor switch protein FliG compare
CCNA_01066 +1.7 11.6 glycosyltransferase compare
CCNA_00447 +1.7 10.1 chemotaxis protein cheD compare
CCNA_01655 +1.7 10.8 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01918 +1.7 9.8 cyclic di-GMP effector protein PopA compare
CCNA_03807 +1.7 10.0 organic solvent resistance transport system Ttg2D protein compare
CCNA_00920 +1.7 3.8 hypothetical protein compare
CCNA_01848 +1.7 11.3 quinol cytochrome oxidase polypeptide IV compare
CCNA_03893 +1.7 5.9 hypothetical protein compare
CCNA_01008 +1.7 12.1 urocanate hydratase compare
CCNA_03089 +1.7 9.5 hypothetical protein compare
CCNA_00562 +1.7 12.2 dihydroorotate dehydrogenase compare
CCNA_02287 +1.7 9.8 TetR-family transcriptional regulator compare
CCNA_01690 +1.7 7.6 MAPEG family membrane protein compare
CCNA_01678 +1.7 8.8 arginine N-succinyltransferase, beta chain compare
CCNA_00032 +1.7 6.1 antitoxin protein VapB compare
CCNA_01006 +1.7 6.1 flagellar hook-basal body complex protein FliE compare
CCNA_03105 +1.7 8.2 DnaJ domain protein compare
CCNA_01813 +1.7 9.8 tRNA-dihydrouridine synthase compare
CCNA_01850 +1.7 12.3 quinol cytochrome oxidase polypeptide I compare
CCNA_03132 +1.7 7.1 transcriptional regulator, antitoxin protein higA compare
CCNA_01062 +1.7 10.9 GDP-mannose 4,6 dehydratase compare
CCNA_01541 +1.7 11.2 LysR-family transcriptional regulator compare
CCNA_01252 +1.7 13.0 soluble lytic murein transglycosylase compare
CCNA_00210 +1.7 13.3 TonB-dependent receptor compare
CCNA_03371 +1.7 7.2 bacterioferritin compare
CCNA_01739 +1.7 8.0 LSU ribosomal protein L9P compare
CCNA_00292 +1.7 5.1 phosphate transport system permease protein pstC compare
CCNA_00952 +1.6 9.7 flagellar assembly protein FlbE/FliH compare
CCNA_03740 +1.6 7.8 cysteine synthase compare
CCNA_03748 +1.6 9.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
CCNA_01583 +1.6 4.1 phosphate-binding protein compare
CCNA_00264 +1.6 9.5 C4-dicarboxylate transport protein compare
CCNA_01926 +1.6 6.8 GGDEF diguanylate cyclase DgcB compare
CCNA_00944 +1.6 9.2 flagellar hook length determination protein compare
CCNA_01804 +1.6 8.9 glutathione peroxidase compare
CCNA_03352 +1.6 7.1 YebC/PmpR transcriptional regulator compare
CCNA_02616 +1.6 10.2 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_02073 +1.6 4.8 cupin domain transcriptional regulator compare
CCNA_01849 +1.6 10.7 quinol cytochrome oxidase polypeptide III compare
CCNA_02866 +1.6 6.2 hypothetical protein compare
CCNA_00441 +1.6 8.9 chemotaxis receiver domain protein cheYI compare
CCNA_02004 +1.6 3.5 SOS-induced inhibitor of cell division SidA compare
CCNA_01643 +1.6 9.5 arginine-tRNA-protein transferase compare
CCNA_01624 +1.6 4.3 orotate phosphoribosyltransferase compare
CCNA_02467 +1.6 10.3 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_00072 +1.6 10.9 hypothetical protein compare
CCNA_02135 +1.6 9.2 6-phosphogluconolactonase compare
CCNA_02379 +1.6 9.6 hypothetical protein compare
CCNA_01619 +1.6 9.7 NYN domain protein compare
CCNA_02942 +1.6 4.9 nucleoside-diphosphate-sugar epimerase compare
CCNA_02663 +1.6 3.3 DnaK suppressor protein DksA compare
CCNA_02330 +1.6 7.1 hypothetical protein compare
CCNA_01063 +1.6 8.8 UDP-perosamine 4-acetyl transferase compare
CCNA_00073 +1.6 12.8 HemY domain membrane protein compare
CCNA_00517 +1.6 1.9 peptidyl-tRNA hydrolase compare
CCNA_03316 +1.6 11.0 UDP-N-acetylglucosamine 4,6-dehydratase/UDP-D-quinovosamine 4-dehydrogenase compare
CCNA_01742 +1.6 7.2 hypothetical protein compare
CCNA_00107 +1.6 4.6 Trm112p-like protein compare
CCNA_00149 +1.6 4.1 Cro/CI-family transcriptional regulator compare
CCNA_00675 +1.6 7.7 VapC-like PIN domain ribonuclease compare
CCNA_02805 +1.6 7.4 hypothetical protein compare
CCNA_00998 +1.5 7.7 ROS/MUCR transcriptional regulator compare
CCNA_01684 +1.5 8.8 phenylalanine-4-hydroxylase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Paraquat dichloride in Caulobacter crescentus NA1000

For stress Paraquat dichloride across organisms