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Experiment set3IT086 for
Methanococcus maripaludis S2
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H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2
200 most important genes:
gene
name
fitness
t score
description
MMP
_RS01385
-5.3
-1.6
imidazole glycerol phosphate synthase subunit HisH
compare
MMP
_RS07005
-3.9
-1.6
4Fe-4S binding protein
compare
MMP
_RS00300
-3.7
-1.9
6 7-dimethyl-8-ribityllumazine synthase
compare
MMP
_RS03315
-3.7
-2.9
ferrous iron transport protein A
compare
MMP
_RS05285
-3.7
-15.2
MMPL family transporter
compare
MMP
_RS01005
-3.7
-3.8
riboflavin synthase
compare
MMP
_RS05280
-3.6
-18.6
COG1361 S-layer family protein
compare
MMP
_RS02010
-3.4
-13.8
PHP domain-containing protein
compare
MMP
_RS08720
-3.3
-3.3
4Fe-4S binding protein
compare
MMP
_RS05920
-3.1
-1.6
50S ribosomal protein L37e
compare
MMP
_RS08820
-3.1
-9.3
hypothetical protein
compare
MMP
_RS06285
-3.1
-4.1
precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT
compare
MMP
_RS06315
-3.0
-2.5
cobalt-precorrin-7 (C(5))-methyltransferase
compare
MMP
_RS07845
-3.0
-5.8
LL-diaminopimelate aminotransferase
compare
MMP
_RS01380
-3.0
-8.7
PHP domain-containing protein
compare
MMP
_RS01225
-2.9
-9.4
DUF5379 domain-containing protein
compare
MMP
_RS00895
-2.9
-8.4
hypothetical protein
compare
MMP
_RS01500
-2.8
-6.1
CBS domain-containing protein
compare
MMP
_RS01175
-2.8
-4.6
triphosphoribosyl-dephospho-CoA synthase
compare
MMP
_RS05290
-2.8
-11.3
TetR/AcrR family transcriptional regulator
compare
MMP
_RS03700
-2.8
-11.9
sodium:proton antiporter
compare
MMP
_RS06355
-2.7
-4.2
molybdenum cofactor biosynthesis protein MoaE
compare
MMP
_RS00110
-2.7
-6.0
hypothetical protein
compare
MMP
_RS03035
-2.7
-7.9
4-hydroxy-tetrahydrodipicolinate synthase
compare
MMP
_RS08745
-2.6
-11.2
CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase
compare
MMP
_RS07635
-2.6
-8.5
MogA/MoaB family molybdenum cofactor biosynthesis protein
compare
MMP
_RS07730
-2.5
-3.4
pyruvate synthase subunit beta
compare
MMP
_RS02195
-2.5
-6.9
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
compare
MMP
_RS08635
-2.5
-3.4
UbiA family prenyltransferase
compare
MMP
_RS02900
-2.5
-1.4
imidazoleglycerol-phosphate dehydratase HisB
compare
MMP
_RS06120
-2.5
-5.2
UPF0147 family protein
compare
MMP
_RS08300
-2.4
-2.8
metal-sulfur cluster assembly factor
compare
MMP
_RS04605
-2.4
-5.7
cobalt ECF transporter T component CbiQ
compare
MMP
_RS08790
-2.4
-5.1
translation initiation factor IF-2 subunit alpha
compare
MMP
_RS02800
-2.4
-7.4
nucleotidyltransferase domain-containing protein
compare
MMP
_RS05515
-2.4
-14.7
cyclic pyranopterin monophosphate synthase MoaC
compare
MMP
_RS07545
-2.4
-2.2
HTH domain-containing protein
compare
MMP
_RS01020
-2.4
-2.4
3 4-dihydroxy-2-butanone-4-phosphate synthase
compare
MMP
_RS01220
-2.4
-9.4
hypothetical protein
compare
MMP
_RS01755
-2.4
-3.1
DUF2097 domain-containing protein
compare
MMP
_RS07750
-2.4
-8.3
DUF357 domain-containing protein
compare
MMP
_RS00515
-2.3
-1.9
DUF655 domain-containing protein
compare
MMP
_RS07390
-2.3
-5.5
cell division protein FtsZ
compare
MMP
_RS07755
-2.3
-3.2
DUF555 domain-containing protein
compare
MMP
_RS04710
-2.3
-3.8
hypothetical protein
compare
MMP
_RS02240
-2.3
-5.9
methanogenesis marker 7 protein
compare
MMP
_RS02245
-2.3
-7.1
hypothetical protein
compare
MMP
_RS06350
-2.3
-7.8
HesA/MoeB/ThiF family protein
compare
MMP
_RS06925
-2.2
-5.0
ribonuclease VapC4
compare
MMP
_RS07075
-2.2
-7.2
phosphomannomutase/phosphoglucomutase
compare
MMP
_RS06670
-2.2
-8.0
glucose-6-phosphate isomerase
compare
MMP
_RS06625
-2.2
-5.3
DNA primase
compare
MMP
_RS04615
-2.2
-5.0
PDGLE domain-containing protein
compare
MMP
_RS06885
-2.2
-5.1
50S ribosome-binding GTPase
compare
MMP
_RS03475
-2.2
-1.4
hypothetical protein
compare
MMP
_RS06900
-2.2
-4.8
coenzyme F420-reducing hydrogenase FrhD protein
compare
MMP
_RS02135
-2.2
-8.0
DUF5612 domain-containing protein
compare
MMP
_RS03015
-2.2
-12.8
GTP 3' 8-cyclase MoaA
compare
MMP
_RS06295
-2.2
-9.0
methanogenesis marker 14 protein
compare
MMP
_RS00685
-2.2
-7.1
2-phospho-L-lactate guanylyltransferase
compare
MMP
_RS01610
-2.2
-5.9
hypothetical protein
compare
MMP
_RS08105
-2.2
-10.4
6-carboxyhexanoate--CoA ligase
compare
MMP
_RS05815
-2.1
-3.9
NOL1/NOP2/sun family putative RNA methylase
compare
MMP
_RS04685
-2.1
-5.5
DUF126 domain-containing protein
compare
MMP
_RS04500
-2.1
-15.4
adenosylmethionine--8-amino-7-oxononanoate transaminase
compare
MMP
_RS08435
-2.1
-4.8
Era-like GTP-binding protein
compare
MMP
_RS06270
-2.1
-8.2
TIGR00300 family protein
compare
MMP
_RS05640
-2.1
-7.9
UTP--glucose-1-phosphate uridylyltransferase GalU
compare
MMP
_RS05930
-2.1
-4.5
3-isopropylmalate dehydratase large subunit
compare
MMP
_RS03960
-2.1
-2.2
hypothetical protein
compare
MMP
_RS02355
-2.1
-6.0
30S ribosomal protein S27ae
compare
MMP
_RS08210
-2.1
-3.9
phosphatidylglycerophosphatase A
compare
MMP
_RS08715
-2.1
-3.6
formylmethanofuran dehydrogenase subunit B
compare
MMP
_RS06340
-2.1
-10.6
phosphoadenosine phosphosulfate reductase family protein
compare
MMP
_RS03400
-2.1
-4.9
archease
compare
MMP
_RS02345
-2.1
-6.0
GTP-dependent dephospho-CoA kinase family protein
compare
MMP
_RS07630
-2.1
-2.8
ATP-binding cassette domain-containing protein
compare
MMP
_RS02280
-2.0
-1.7
DUF211 domain-containing protein
compare
MMP
_RS08460
-2.0
-4.0
proteasome-activating nucleotidase
compare
MMP
_RS06730
-2.0
-3.9
phosphopantothenate/pantothenate synthetase
compare
MMP
_RS05555
-2.0
-2.8
DUF4040 domain-containing protein
compare
MMP
_RS01725
-2.0
-6.6
class I SAM-dependent methyltransferase family protein
compare
MMP
_RS05250
-2.0
-2.9
NFYB/HAP3 family transcription factor subunit
compare
MMP
_RS08100
-2.0
-9.8
8-amino-7-oxononanoate synthase
compare
MMP
_RS08440
-2.0
-5.7
cell division protein SepF
compare
MMP
_RS07645
-2.0
-8.2
aldehyde dehydrogenase family protein
compare
MMP
_RS08095
-2.0
-9.9
dethiobiotin synthase
compare
MMP
_RS03435
-2.0
-4.1
ketol-acid reductoisomerase
compare
MMP
_RS06370
-2.0
-6.7
biotin synthase BioB
compare
MMP
_RS04720
-2.0
-6.2
DedA family protein
compare
MMP
_RS09020
-1.9
-2.9
hypothetical protein
compare
MMP
_RS00810
-1.9
-9.8
topoisomerase DNA-binding C4 zinc finger domain-containing protein
compare
MMP
_RS00115
-1.9
-12.6
radical SAM protein
compare
MMP
_RS01830
-1.9
-3.6
tRNA-Val
compare
MMP
_RS02190
-1.9
-5.7
sulfopyruvate decarboxylase subunit alpha
compare
MMP
_RS07350
-1.9
-3.0
preprotein translocase subunit Sec61beta
compare
MMP
_RS07605
-1.9
-6.1
diadenylate cyclase
compare
MMP
_RS06020
-1.9
-6.3
archaeoflavoprotein AfpA
compare
MMP
_RS03445
-1.9
-2.2
methanogenesis marker 17 protein
compare
MMP
_RS01365
-1.8
-3.6
archaeal proteasome endopeptidase complex subunit alpha
compare
MMP
_RS03640
-1.8
-5.7
archaeal proteasome endopeptidase complex subunit beta
compare
MMP
_RS07695
-1.8
-7.6
DUF3236 domain-containing protein
compare
MMP
_RS03600
-1.8
-4.7
triose-phosphate isomerase
compare
MMP
_RS00725
-1.8
-9.9
5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC
compare
MMP
_RS03155
-1.8
-8.8
precorrin-6A reductase
compare
MMP
_RS03580
-1.8
-5.3
signal recognition particle-docking protein FtsY
compare
MMP
_RS07600
-1.8
-4.8
Ni-sirohydrochlorin a c-diamide synthase
compare
MMP
_RS06895
-1.8
-3.1
selenocysteine-specific translation elongation factor
compare
MMP
_RS03095
-1.8
-10.2
diphthine synthase
compare
MMP
_RS06400
-1.8
-3.1
4Fe-4S binding protein
compare
MMP
_RS07580
-1.7
-5.7
DUF356 domain-containing protein
compare
MMP
_RS04780
-1.7
-3.6
ribonuclease P
compare
MMP
_RS04775
-1.7
-5.9
adenosylhomocysteinase
compare
MMP
_RS00320
-1.7
-4.3
class I SAM-dependent methyltransferase
compare
MMP
_RS01800
-1.7
-6.4
TIGR00303 family protein
compare
MMP
_RS07380
-1.7
-3.2
transcription elongation factor Spt5
compare
MMP
_RS00305
-1.7
-4.2
phosphoribosyl-ATP diphosphatase
compare
MMP
_RS06865
-1.7
-3.2
HypC/HybG/HupF family hydrogenase formation chaperone
compare
MMP
_RS03025
-1.7
-6.8
molybdenum cofactor guanylyltransferase
compare
MMP
_RS04585
-1.7
-9.9
AIR synthase related protein
compare
MMP
_RS04850
-1.6
-13.5
UPF0254 family protein
compare
MMP
_RS00735
-1.6
-6.3
5 10-methenyltetrahydromethanopterin hydrogenase
compare
MMP
_RS06630
-1.6
-2.0
UPF0058 family protein
compare
MMP
_RS06475
-1.6
-5.5
FAD-dependent oxidoreductase
compare
MMP
_RS05425
-1.6
-4.8
monovalent cation/H+ antiporter complex subunit F
compare
MMP
_RS03110
-1.6
-6.9
glycosyltransferase family 2 protein
compare
MMP
_RS06215
-1.6
-5.2
30S ribosomal protein S6e
compare
MMP
_RS00730
-1.6
-9.6
5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB
compare
MMP
_RS06980
-1.6
-7.9
tRNA 2-thiocytidine biosynthesis TtcA family protein
compare
MMP
_RS07195
-1.6
-11.2
M20 family metallo-hydrolase
compare
MMP
_RS01325
-1.6
-2.7
dihydroneopterin aldolase family protein
compare
MMP
_RS07735
-1.5
-1.5
2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
compare
MMP
_RS04955
-1.5
-6.8
DNA topoisomerase I
compare
MMP
_RS08165
-1.5
-1.9
phosphoglycerate dehydrogenase
compare
MMP
_RS07425
-1.5
-6.6
GTP-binding protein
compare
MMP
_RS00520
-1.5
-2.5
RNA polymerase Rpb4 family protein
compare
MMP
_RS02145
-1.5
-6.8
winged helix-turn-helix transcriptional regulator
compare
MMP
_RS06105
-1.5
-8.9
hydrogenase maturation peptidase HycI
compare
MMP
_RS01960
-1.4
-0.9
hypothetical protein
compare
MMP
_RS04620
-1.4
-7.6
cobalt transporter CbiM
compare
MMP
_RS01955
-1.4
-2.2
hypothetical protein
compare
MMP
_RS00050
-1.4
-7.9
AarF/UbiB family protein
compare
MMP
_RS05345
-1.4
-7.3
hypothetical protein
compare
MMP
_RS03385
-1.4
-1.8
cation diffusion facilitator family transporter
compare
MMP
_RS02875
-1.4
-9.2
chorismate pyruvate-lyase family protein
compare
MMP
_RS06395
-1.4
-3.6
ThiF family adenylyltransferase
compare
MMP
_RS04890
-1.4
-1.2
adenylyltransferase/cytidyltransferase family protein
compare
MMP
_RS06940
-1.4
-3.4
polyprenyl diphosphate synthase
compare
MMP
_RS04870
-1.4
-5.2
TIGR02253 family HAD-type hydrolase
compare
MMP
_RS07575
-1.4
-2.3
RNA ligase partner protein
compare
MMP
_RS01840
-1.3
-6.6
TIGR00289 family protein
compare
MMP
_RS07420
-1.3
-4.4
metalloregulator ArsR/SmtB family transcription factor
compare
MMP
_RS06110
-1.3
-3.4
ATP-dependent protease LonB
compare
MMP
_RS01905
-1.3
-9.5
glycosyltransferase
compare
MMP
_RS06130
-1.3
-4.8
peptidylprolyl isomerase
compare
MMP
_RS07540
-1.3
-4.2
CBS domain-containing protein
compare
MMP
_RS03140
-1.3
-9.9
hypothetical protein
compare
MMP
_RS00695
-1.3
-1.2
biotin--[acetyl-CoA-carboxylase] ligase
compare
MMP
_RS05540
-1.3
-3.7
hypothetical protein
compare
MMP
_RS00720
-1.3
-8.5
metal-dependent hydrolase
compare
MMP
_RS01665
-1.3
-3.3
DUF2111 domain-containing protein
compare
MMP
_RS01795
-1.3
-2.0
methanogenesis marker 6 protein
compare
MMP
_RS01910
-1.3
-7.6
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
compare
MMP
_RS01900
-1.3
-9.0
hypothetical protein
compare
MMP
_RS00750
-1.3
-4.2
fumarate hydratase
compare
MMP
_RS01915
-1.3
-8.7
DUF354 domain-containing protein
compare
MMP
_RS07200
-1.2
-7.7
[5-(aminomethyl)furan-3-yl]methyl phosphate kinase
compare
MMP
_RS08445
-1.2
-5.1
DUF2099 family protein
compare
MMP
_RS00060
-1.2
-1.6
3-dehydroquinate synthase II
compare
MMP
_RS08650
-1.2
-4.5
glutamine--fructose-6-phosphate transaminase (isomerizing)
compare
MMP
_RS05925
-1.2
-5.8
small nuclear ribonucleoprotein
compare
MMP
_RS05525
-1.2
-5.9
calcium/sodium antiporter
compare
MMP
_RS01920
-1.1
-8.4
glycosyltransferase family 2 protein
compare
MMP
_RS06230
-1.1
-2.7
helix-turn-helix domain-containing protein
compare
MMP
_RS01925
-1.1
-5.7
DUF1616 domain-containing protein
compare
MMP
_RS07700
-1.1
-7.8
DUF1188 domain-containing protein
compare
MMP
_RS04875
-1.1
-3.7
energy-converting hydrogenase B subunit P
compare
MMP
_RS08330
-1.1
-5.3
NADH-quinone oxidoreductase subunit H
compare
MMP
_RS06770
-1.1
-7.0
DHH family phosphoesterase
compare
MMP
_RS08195
-1.1
-6.6
hypothetical protein
compare
MMP
_RS00325
-1.1
-2.4
RNA-binding protein
compare
MMP
_RS01335
-1.1
-3.6
prefoldin subunit beta
compare
MMP
_RS06725
-1.0
-7.9
hypothetical protein
compare
MMP
_RS01415
-1.0
-4.1
DUF2067 domain-containing protein
compare
MMP
_RS07525
-1.0
-6.8
4Fe-4S binding protein
compare
MMP
_RS03145
-1.0
-5.9
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
compare
MMP
_RS02165
-1.0
-6.3
tRNA-dihydrouridine synthase
compare
MMP
_RS01895
-1.0
-7.7
flippase
compare
MMP
_RS05845
-1.0
-1.9
tRNA-intron lyase
compare
MMP
_RS07090
-1.0
-6.9
tRNA (adenine-N1)-methyltransferase
compare
MMP
_RS05450
-1.0
-4.2
CoB--CoM heterodisulfide reductase subunit C
compare
MMP
_RS05440
-1.0
-6.3
winged helix-turn-helix transcriptional regulator
compare
MMP
_RS00985
-1.0
-4.7
CDC48 family AAA ATPase
compare
MMP
_RS01045
-0.9
-6.4
diphthamide biosynthesis enzyme Dph2
compare
MMP
_RS05445
-0.9
-5.5
CoB--CoM heterodisulfide reductase subunit B
compare
MMP
_RS07385
-0.9
-1.1
protein translocase SEC61 complex subunit gamma
compare
MMP
_RS08785
-0.9
-1.7
RNA-protein complex protein Nop10
compare
MMP
_RS08595
-0.9
-1.6
flagellar protein C
compare
MMP
_RS00315
-0.9
-3.5
Nif3-like dinuclear metal center hexameric protein
compare
MMP
_RS08915
-0.9
-2.7
2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
compare
Specific Phenotypes
None in this experiment
For Methanococcus maripaludis S2 in rich t1 experiments